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        Module&nbsp;useful
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<h1 class="epydoc">Source Code for <a href="Priithon.useful-module.html">Module Priithon.useful</a></h1>
<pre class="py-src">
<a name="L1"></a><tt class="py-lineno">   1</tt>  <tt class="py-line"><tt class="py-docstring">"""Priithon U modules: lot's of simple 'useful' (shortcut) functions</tt> </tt>
<a name="L2"></a><tt class="py-lineno">   2</tt>  <tt class="py-line"><tt class="py-docstring">"""</tt> </tt>
<a name="L3"></a><tt class="py-lineno">   3</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-name">__future__</tt> <tt class="py-keyword">import</tt> <tt class="py-name">absolute_import</tt> </tt>
<a name="L4"></a><tt class="py-lineno">   4</tt>  <tt class="py-line"> </tt>
<a name="L5"></a><tt class="py-lineno">   5</tt>  <tt class="py-line"><tt class="py-name">__author__</tt>  <tt class="py-op">=</tt> <tt class="py-string">"Sebastian Haase &lt;seb.haase+Priithon@gmail.com&gt;"</tt> </tt>
<a name="L6"></a><tt class="py-lineno">   6</tt>  <tt class="py-line"><tt id="link-0" class="py-name" targets="Variable Priithon.PriShell.__license__=Priithon.PriShell-module.html#__license__,Variable Priithon.__license__=Priithon-module.html#__license__"><a title="Priithon.PriShell.__license__
Priithon.__license__" class="py-name" href="#" onclick="return doclink('link-0', '__license__', 'link-0');">__license__</a></tt> <tt class="py-op">=</tt> <tt class="py-string">"BSD license - see LICENSE file"</tt> </tt>
<a name="L7"></a><tt class="py-lineno">   7</tt>  <tt class="py-line"> </tt>
<a name="L8"></a><tt class="py-lineno">   8</tt>  <tt class="py-line"><tt class="py-comment">#from __future__ import generators</tt> </tt>
<a name="L9"></a><tt class="py-lineno">   9</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L10"></a><tt class="py-lineno">  10</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">numpy</tt> <tt class="py-keyword">as</tt> <tt class="py-name">N</tt> </tt>
<a name="L11"></a><tt class="py-lineno">  11</tt>  <tt class="py-line"><tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L12"></a><tt class="py-lineno">  12</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-name">scipy</tt> <tt class="py-keyword">import</tt> <tt class="py-name">ndimage</tt> <tt class="py-keyword">as</tt> <tt class="py-name">nd</tt> </tt>
<a name="L13"></a><tt class="py-lineno">  13</tt>  <tt class="py-line"><tt class="py-keyword">except</tt> <tt class="py-name">ImportError</tt><tt class="py-op">:</tt> </tt>
<a name="L14"></a><tt class="py-lineno">  14</tt>  <tt class="py-line">    <tt class="py-keyword">pass</tt> </tt>
<a name="L15"></a><tt class="py-lineno">  15</tt>  <tt class="py-line"><tt class="py-comment">#20060722  import numarray as na</tt> </tt>
<a name="L16"></a><tt class="py-lineno">  16</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">######from numarray import nd_image as nd</tt> </tt>
<a name="L17"></a><tt class="py-lineno">  17</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#20060722  from numarray import linear_algebra as la</tt> </tt>
<a name="L18"></a><tt class="py-lineno">  18</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#20060722  from numarray import random_array as ra</tt> </tt>
<a name="L19"></a><tt class="py-lineno">  19</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L20"></a><tt class="py-lineno">  20</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt class="py-name">pdb</tt> <tt class="py-comment"># useful for U.pdb.pm()  # no time to first import: exception would get lost</tt> </tt>
<a name="L21"></a><tt class="py-lineno">  21</tt>  <tt class="py-line"> </tt>
<a name="L22"></a><tt class="py-lineno">  22</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-name">Priithon_bin</tt> <tt class="py-keyword">import</tt> <tt id="link-1" class="py-name" targets="Module Priithon.plt.seb=Priithon.plt.seb-module.html"><a title="Priithon.plt.seb" class="py-name" href="#" onclick="return doclink('link-1', 'seb', 'link-1');">seb</a></tt> <tt class="py-keyword">as</tt> <tt class="py-name">S</tt> </tt>
<a name="L23"></a><tt class="py-lineno">  23</tt>  <tt class="py-line"> </tt>
<a name="L24"></a><tt class="py-lineno">  24</tt>  <tt class="py-line"><tt class="py-comment">#SyntaxError: 'import *' not allowed with 'from .' #from .usefulGeo import *</tt> </tt>
<a name="L25"></a><tt class="py-lineno">  25</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#&lt;hack&gt;</tt> </tt>
<a name="L26"></a><tt class="py-lineno">  26</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-2" class="py-name" targets="Module Priithon.usefulGeo=Priithon.usefulGeo-module.html"><a title="Priithon.usefulGeo" class="py-name" href="#" onclick="return doclink('link-2', 'usefulGeo', 'link-2');">usefulGeo</a></tt> </tt>
<a name="L27"></a><tt class="py-lineno">  27</tt>  <tt class="py-line"><tt class="py-keyword">for</tt> <tt class="py-name">n</tt> <tt class="py-keyword">in</tt> <tt id="link-3" class="py-name"><a title="Priithon.usefulGeo" class="py-name" href="#" onclick="return doclink('link-3', 'usefulGeo', 'link-2');">usefulGeo</a></tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt><tt class="py-op">:</tt> </tt>
<a name="L28"></a><tt class="py-lineno">  28</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">n</tt><tt class="py-op">.</tt><tt class="py-name">startswith</tt><tt class="py-op">(</tt><tt class="py-string">'_'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L29"></a><tt class="py-lineno">  29</tt>  <tt class="py-line">        <tt class="py-keyword">exec</tt> <tt class="py-string">"%s = usefulGeo.%s"</tt> <tt class="py-op">%</tt> <tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">,</tt><tt class="py-name">n</tt><tt class="py-op">)</tt> </tt>
<a name="L30"></a><tt class="py-lineno">  30</tt>  <tt class="py-line"><tt class="py-keyword">del</tt> <tt class="py-name">n</tt><tt class="py-op">,</tt> <tt id="link-4" class="py-name"><a title="Priithon.usefulGeo" class="py-name" href="#" onclick="return doclink('link-4', 'usefulGeo', 'link-2');">usefulGeo</a></tt> </tt>
<a name="L31"></a><tt class="py-lineno">  31</tt>  <tt class="py-line"><tt class="py-comment">#&lt;/hack&gt;</tt> </tt>
<a name="L32"></a><tt class="py-lineno">  32</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L33"></a><tt class="py-lineno">  33</tt>  <tt class="py-line"><tt class="py-comment">#  &gt;&gt;&gt; dir(A)</tt> </tt>
<a name="L34"></a><tt class="py-lineno">  34</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#  ['TextFile', '__builtins__', '__doc__', '__file__', '__name__', 'numarray', 'readArray', 'readFloatArray', 'readIntegerArray', 'string', 'writeArray', 'writeDataSets']</tt> </tt>
<a name="L35"></a><tt class="py-lineno">  35</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L36"></a><tt class="py-lineno">  36</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-op">.</tt><tt id="link-5" class="py-name" targets="Module Priithon.ArrayIO=Priithon.ArrayIO-module.html"><a title="Priithon.ArrayIO" class="py-name" href="#" onclick="return doclink('link-5', 'ArrayIO', 'link-5');">ArrayIO</a></tt> <tt class="py-keyword">import</tt> <tt id="link-6" class="py-name" targets="Function Priithon.ArrayIO.readArray_conv()=Priithon.ArrayIO-module.html#readArray_conv"><a title="Priithon.ArrayIO.readArray_conv" class="py-name" href="#" onclick="return doclink('link-6', 'readArray_conv', 'link-6');">readArray_conv</a></tt><tt class="py-op">,</tt> <tt id="link-7" class="py-name" targets="Function Priithon.ArrayIO.readArray()=Priithon.ArrayIO-module.html#readArray"><a title="Priithon.ArrayIO.readArray" class="py-name" href="#" onclick="return doclink('link-7', 'readArray', 'link-7');">readArray</a></tt><tt class="py-op">,</tt> <tt id="link-8" class="py-name" targets="Function Priithon.ArrayIO.readFloatArray()=Priithon.ArrayIO-module.html#readFloatArray"><a title="Priithon.ArrayIO.readFloatArray" class="py-name" href="#" onclick="return doclink('link-8', 'readFloatArray', 'link-8');">readFloatArray</a></tt><tt class="py-op">,</tt> <tt id="link-9" class="py-name" targets="Function Priithon.ArrayIO.readIntegerArray()=Priithon.ArrayIO-module.html#readIntegerArray"><a title="Priithon.ArrayIO.readIntegerArray" class="py-name" href="#" onclick="return doclink('link-9', 'readIntegerArray', 'link-9');">readIntegerArray</a></tt><tt class="py-op">,</tt> <tt id="link-10" class="py-name" targets="Function Priithon.ArrayIO.writeArray()=Priithon.ArrayIO-module.html#writeArray"><a title="Priithon.ArrayIO.writeArray" class="py-name" href="#" onclick="return doclink('link-10', 'writeArray', 'link-10');">writeArray</a></tt><tt class="py-op">,</tt> <tt id="link-11" class="py-name" targets="Function Priithon.ArrayIO.writeDataSets()=Priithon.ArrayIO-module.html#writeDataSets"><a title="Priithon.ArrayIO.writeDataSets" class="py-name" href="#" onclick="return doclink('link-11', 'writeDataSets', 'link-11');">writeDataSets</a></tt> </tt>
<a name="L37"></a><tt class="py-lineno">  37</tt>  <tt class="py-line"> </tt>
<a name="L38"></a><tt class="py-lineno">  38</tt>  <tt class="py-line"><tt class="py-keyword">from</tt> <tt class="py-op">.</tt><tt id="link-12" class="py-name" targets="Module Priithon.readerSIF=Priithon.readerSIF-module.html"><a title="Priithon.readerSIF" class="py-name" href="#" onclick="return doclink('link-12', 'readerSIF', 'link-12');">readerSIF</a></tt> <tt class="py-keyword">import</tt> <tt id="link-13" class="py-name" targets="Function Priithon.readerSIF.readSIF()=Priithon.readerSIF-module.html#readSIF"><a title="Priithon.readerSIF.readSIF" class="py-name" href="#" onclick="return doclink('link-13', 'readSIF', 'link-13');">readSIF</a></tt> <tt class="py-keyword">as</tt> <tt class="py-name">loadSIF</tt> <tt class="py-comment"># uses memmap</tt> </tt>
<a name="L39"></a><tt class="py-lineno">  39</tt>  <tt class="py-line"> </tt>
<a name="myStr"></a><div id="myStr-def"><a name="L40"></a><tt class="py-lineno">  40</tt> <a class="py-toggle" href="#" id="myStr-toggle" onclick="return toggle('myStr');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#myStr">myStr</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="myStr-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="myStr-expanded"><a name="L41"></a><tt class="py-lineno">  41</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L42"></a><tt class="py-lineno">  42</tt>  <tt class="py-line"><tt class="py-docstring">    like str()  but calls str() recursively for lists and tuples</tt> </tt>
<a name="L43"></a><tt class="py-lineno">  43</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L44"></a><tt class="py-lineno">  44</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">types</tt><tt class="py-op">,</tt> <tt id="link-14" class="py-name" targets="Module Priithon.string=Priithon.string-module.html"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-14', 'string', 'link-14');">string</a></tt> <tt class="py-comment">#, __builtin__</tt> </tt>
<a name="L45"></a><tt class="py-lineno">  45</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> <tt class="py-keyword">is</tt> <tt class="py-name">types</tt><tt class="py-op">.</tt><tt class="py-name">UnicodeType</tt><tt class="py-op">:</tt> </tt>
<a name="L46"></a><tt class="py-lineno">  46</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-string">"u'"</tt><tt class="py-op">+</tt><tt class="py-name">a</tt><tt class="py-op">+</tt><tt class="py-string">"'"</tt> </tt>
<a name="L47"></a><tt class="py-lineno">  47</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> <tt class="py-keyword">is</tt> <tt class="py-name">types</tt><tt class="py-op">.</tt><tt class="py-name">StringType</tt><tt class="py-op">:</tt> </tt>
<a name="L48"></a><tt class="py-lineno">  48</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-string">"'"</tt><tt class="py-op">+</tt><tt class="py-name">a</tt><tt class="py-op">+</tt><tt class="py-string">"'"</tt> </tt>
<a name="L49"></a><tt class="py-lineno">  49</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> <tt class="py-keyword">is</tt> <tt class="py-name">types</tt><tt class="py-op">.</tt><tt class="py-name">TupleType</tt><tt class="py-op">:</tt> </tt>
<a name="L50"></a><tt class="py-lineno">  50</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-string">'('</tt> <tt class="py-op">+</tt> <tt id="link-15" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-15', 'string', 'link-14');">string</a></tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt id="link-16" class="py-name" targets="Function Priithon.useful.myStr()=Priithon.useful-module.html#myStr"><a title="Priithon.useful.myStr" class="py-name" href="#" onclick="return doclink('link-16', 'myStr', 'link-16');">myStr</a></tt><tt class="py-op">,</tt><tt class="py-name">a</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-string">', '</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt><tt class="py-string">')'</tt> </tt>
<a name="L51"></a><tt class="py-lineno">  51</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> <tt class="py-keyword">is</tt> <tt class="py-name">types</tt><tt class="py-op">.</tt><tt class="py-name">ListType</tt><tt class="py-op">:</tt> </tt>
<a name="L52"></a><tt class="py-lineno">  52</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-string">'['</tt> <tt class="py-op">+</tt> <tt id="link-17" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-17', 'string', 'link-14');">string</a></tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt id="link-18" class="py-name"><a title="Priithon.useful.myStr" class="py-name" href="#" onclick="return doclink('link-18', 'myStr', 'link-16');">myStr</a></tt><tt class="py-op">,</tt><tt class="py-name">a</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-string">', '</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt><tt class="py-string">']'</tt> </tt>
<a name="L53"></a><tt class="py-lineno">  53</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> <tt class="py-keyword">is</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-19" class="py-name" targets="Variable Priithon.mockNDarray.mockNDarray.dtype=Priithon.mockNDarray.mockNDarray-class.html#dtype"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-19', 'dtype', 'link-19');">dtype</a></tt> <tt class="py-keyword">and</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">isbuiltin</tt><tt class="py-op">:</tt> </tt>
<a name="L54"></a><tt class="py-lineno">  54</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-20" class="py-name" targets="Variable Priithon.py.crust.Crust.name=Priithon.py.crust.Crust-class.html#name,Variable Priithon.py.crust.CrustFrame.name=Priithon.py.crust.CrustFrame-class.html#name,Variable Priithon.py.filling.Filling.name=Priithon.py.filling.Filling-class.html#name,Variable Priithon.py.filling.FillingFrame.name=Priithon.py.filling.FillingFrame-class.html#name,Variable Priithon.py.filling.FillingText.name=Priithon.py.filling.FillingText-class.html#name,Variable Priithon.py.filling.FillingTree.name=Priithon.py.filling.FillingTree-class.html#name,Variable Priithon.py.shell.Shell.name=Priithon.py.shell.Shell-class.html#name,Variable Priithon.py.shell.ShellFacade.name=Priithon.py.shell.ShellFacade-class.html#name,Variable Priithon.py.shell.ShellFrame.name=Priithon.py.shell.ShellFrame-class.html#name"><a title="Priithon.py.crust.Crust.name
Priithon.py.crust.CrustFrame.name
Priithon.py.filling.Filling.name
Priithon.py.filling.FillingFrame.name
Priithon.py.filling.FillingText.name
Priithon.py.filling.FillingTree.name
Priithon.py.shell.Shell.name
Priithon.py.shell.ShellFacade.name
Priithon.py.shell.ShellFrame.name" class="py-name" href="#" onclick="return doclink('link-20', 'name', 'link-20');">name</a></tt>  <tt class="py-comment"># 20060720 </tt> </tt>
<a name="L55"></a><tt class="py-lineno">  55</tt>  <tt class="py-line"> </tt>
<a name="L56"></a><tt class="py-lineno">  56</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L57"></a><tt class="py-lineno">  57</tt>  <tt class="py-line">        <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">str</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L58"></a><tt class="py-lineno">  58</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt><tt class="py-op">:</tt> </tt>
<a name="L59"></a><tt class="py-lineno">  59</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">repr</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L60"></a><tt class="py-lineno">  60</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">s</tt> <tt class="py-op">==</tt><tt class="py-string">''</tt><tt class="py-op">:</tt> </tt>
<a name="L61"></a><tt class="py-lineno">  61</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">repr</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L62"></a><tt class="py-lineno">  62</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L63"></a><tt class="py-lineno">  63</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">s</tt> </tt>
</div><a name="L64"></a><tt class="py-lineno">  64</tt>  <tt class="py-line"> </tt>
<a name="_fixDisplayHook"></a><div id="_fixDisplayHook-def"><a name="L65"></a><tt class="py-lineno">  65</tt> <a class="py-toggle" href="#" id="_fixDisplayHook-toggle" onclick="return toggle('_fixDisplayHook');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_fixDisplayHook">_fixDisplayHook</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_fixDisplayHook-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_fixDisplayHook-expanded"><a name="L66"></a><tt class="py-lineno">  66</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L67"></a><tt class="py-lineno">  67</tt>  <tt class="py-line"><tt class="py-docstring">    change default displayHook: print .3 instead of .299999</tt> </tt>
<a name="L68"></a><tt class="py-lineno">  68</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L69"></a><tt class="py-lineno">  69</tt>  <tt class="py-line"> </tt>
<a name="L70"></a><tt class="py-lineno">  70</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">sys</tt><tt class="py-op">,</tt> <tt class="py-name">__main__</tt> </tt>
<a name="L71"></a><tt class="py-lineno">  71</tt>  <tt class="py-line">    <tt class="py-keyword">def</tt> <tt class="py-def-name">_sebsDisplHook</tt><tt class="py-op">(</tt><tt class="py-param">v</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L72"></a><tt class="py-lineno">  72</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">v</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> <tt class="py-comment"># != None:</tt> </tt>
<a name="L73"></a><tt class="py-lineno">  73</tt>  <tt class="py-line">            <tt class="py-keyword">import</tt> <tt class="py-name">__main__</tt> <tt class="py-comment">#global _</tt> </tt>
<a name="L74"></a><tt class="py-lineno">  74</tt>  <tt class="py-line">            <tt class="py-comment">#_ = v</tt> </tt>
<a name="L75"></a><tt class="py-lineno">  75</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-name">__main__</tt><tt class="py-op">.</tt><tt class="py-name">_</tt> <tt class="py-op">=</tt> <tt class="py-name">v</tt> </tt>
<a name="L76"></a><tt class="py-lineno">  76</tt>  <tt class="py-line">            <tt class="py-keyword">print</tt> <tt id="link-21" class="py-name"><a title="Priithon.useful.myStr" class="py-name" href="#" onclick="return doclink('link-21', 'myStr', 'link-16');">myStr</a></tt><tt class="py-op">(</tt><tt class="py-name">v</tt><tt class="py-op">)</tt> </tt>
</div><a name="L77"></a><tt class="py-lineno">  77</tt>  <tt class="py-line">    <tt class="py-name">sys</tt><tt class="py-op">.</tt><tt class="py-name">displayhook</tt> <tt class="py-op">=</tt> <tt id="link-22" class="py-name" targets="Function Priithon.includeAll._sebsDisplHook()=Priithon.includeAll-module.html#_sebsDisplHook"><a title="Priithon.includeAll._sebsDisplHook" class="py-name" href="#" onclick="return doclink('link-22', '_sebsDisplHook', 'link-22');">_sebsDisplHook</a></tt> </tt>
</div><a name="L78"></a><tt class="py-lineno">  78</tt>  <tt class="py-line"> </tt>
<a name="_execPriithonRunCommands"></a><div id="_execPriithonRunCommands-def"><a name="L79"></a><tt class="py-lineno">  79</tt> <a class="py-toggle" href="#" id="_execPriithonRunCommands-toggle" onclick="return toggle('_execPriithonRunCommands');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_execPriithonRunCommands">_execPriithonRunCommands</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_execPriithonRunCommands-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_execPriithonRunCommands-expanded"><a name="L80"></a><tt class="py-lineno">  80</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L81"></a><tt class="py-lineno">  81</tt>  <tt class="py-line"><tt class="py-docstring">    http://en.wikipedia.org/wiki/Run_Commands</tt> </tt>
<a name="L82"></a><tt class="py-lineno">  82</tt>  <tt class="py-line"><tt class="py-docstring">    Rc stands for the phrase "run commands"</tt> </tt>
<a name="L83"></a><tt class="py-lineno">  83</tt>  <tt class="py-line"><tt class="py-docstring">    It is used for any file that contains startup information for a command.</tt> </tt>
<a name="L84"></a><tt class="py-lineno">  84</tt>  <tt class="py-line"><tt class="py-docstring">    While not historically precise, rc may also be pronounced as "run control", because an rc file controls how a program runs.</tt> </tt>
<a name="L85"></a><tt class="py-lineno">  85</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L86"></a><tt class="py-lineno">  86</tt>  <tt class="py-line"><tt class="py-docstring">    Similarely to matplotlib (ref. matplotlib_fname()), we look for a "user customization" file,</tt> </tt>
<a name="L87"></a><tt class="py-lineno">  87</tt>  <tt class="py-line"><tt class="py-docstring">    ".priithonrc.py" in the following order:</tt> </tt>
<a name="L88"></a><tt class="py-lineno">  88</tt>  <tt class="py-line"><tt class="py-docstring">    1. currentworking directory</tt> </tt>
<a name="L89"></a><tt class="py-lineno">  89</tt>  <tt class="py-line"><tt class="py-docstring">    2. environment variable PRIITHONRC</tt> </tt>
<a name="L90"></a><tt class="py-lineno">  90</tt>  <tt class="py-line"><tt class="py-docstring">    3. HOME/.priithonrc.py</tt> </tt>
<a name="L91"></a><tt class="py-lineno">  91</tt>  <tt class="py-line"><tt class="py-docstring">    4. windows only:  TODO FIXME</tt> </tt>
<a name="L92"></a><tt class="py-lineno">  92</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L93"></a><tt class="py-lineno">  93</tt>  <tt class="py-line">    <tt class="py-name">rcFN</tt> <tt class="py-op">=</tt> <tt id="link-23" class="py-name" targets="Function Priithon.useful._getRCfile()=Priithon.useful-module.html#_getRCfile"><a title="Priithon.useful._getRCfile" class="py-name" href="#" onclick="return doclink('link-23', '_getRCfile', 'link-23');">_getRCfile</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L94"></a><tt class="py-lineno">  94</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">rcFN</tt><tt class="py-op">:</tt> </tt>
<a name="L95"></a><tt class="py-lineno">  95</tt>  <tt class="py-line">        <tt class="py-keyword">import</tt> <tt class="py-name">sys</tt><tt class="py-op">,</tt><tt class="py-name">__main__</tt> </tt>
<a name="L96"></a><tt class="py-lineno">  96</tt>  <tt class="py-line">        <tt class="py-comment">#try:</tt> </tt>
<a name="L97"></a><tt class="py-lineno">  97</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment">#stdout = sys.stdout</tt> </tt>
<a name="L98"></a><tt class="py-lineno">  98</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment">#try:</tt> </tt>
<a name="L99"></a><tt class="py-lineno">  99</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment">#    sys.stdout = __main__.shell</tt> </tt>
<a name="L100"></a><tt class="py-lineno"> 100</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment">#except:</tt> </tt>
<a name="L101"></a><tt class="py-lineno"> 101</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment">#    pass</tt> </tt>
<a name="L102"></a><tt class="py-lineno"> 102</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L103"></a><tt class="py-lineno"> 103</tt>  <tt class="py-line">            <tt class="py-name">execfile</tt><tt class="py-op">(</tt><tt class="py-name">rcFN</tt><tt class="py-op">,</tt><tt class="py-name">__main__</tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt><tt class="py-op">)</tt> </tt>
<a name="L104"></a><tt class="py-lineno"> 104</tt>  <tt class="py-line">        <tt class="py-keyword">except</tt><tt class="py-op">:</tt> </tt>
<a name="L105"></a><tt class="py-lineno"> 105</tt>  <tt class="py-line">            <tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-24" class="py-name" targets="Module Priithon.PriConfig=Priithon.PriConfig-module.html"><a title="Priithon.PriConfig" class="py-name" href="#" onclick="return doclink('link-24', 'PriConfig', 'link-24');">PriConfig</a></tt> </tt>
<a name="L106"></a><tt class="py-lineno"> 106</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt id="link-25" class="py-name"><a title="Priithon.PriConfig" class="py-name" href="#" onclick="return doclink('link-25', 'PriConfig', 'link-24');">PriConfig</a></tt><tt class="py-op">.</tt><tt id="link-26" class="py-name" targets="Variable Priithon.PriConfig.raiseEventHandlerExceptions=Priithon.PriConfig-module.html#raiseEventHandlerExceptions"><a title="Priithon.PriConfig.raiseEventHandlerExceptions" class="py-name" href="#" onclick="return doclink('link-26', 'raiseEventHandlerExceptions', 'link-26');">raiseEventHandlerExceptions</a></tt><tt class="py-op">:</tt> </tt>
<a name="L107"></a><tt class="py-lineno"> 107</tt>  <tt class="py-line">                <tt class="py-keyword">raise</tt> </tt>
<a name="L108"></a><tt class="py-lineno"> 108</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L109"></a><tt class="py-lineno"> 109</tt>  <tt class="py-line">                <tt class="py-keyword">import</tt> <tt class="py-name">traceback</tt> </tt>
<a name="L110"></a><tt class="py-lineno"> 110</tt>  <tt class="py-line">                <tt class="py-name">traceback</tt><tt class="py-op">.</tt><tt class="py-name">print_exc</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L111"></a><tt class="py-lineno"> 111</tt>  <tt class="py-line">        <tt class="py-comment">#finally:</tt> </tt>
<a name="L112"></a><tt class="py-lineno"> 112</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#    sys.stdout = stdout</tt> </tt>
<a name="L113"></a><tt class="py-lineno"> 113</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="_getRCfile"></a><div id="_getRCfile-def"><a name="L114"></a><tt class="py-lineno"> 114</tt> <a class="py-toggle" href="#" id="_getRCfile-toggle" onclick="return toggle('_getRCfile');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_getRCfile">_getRCfile</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_getRCfile-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_getRCfile-expanded"><a name="L115"></a><tt class="py-lineno"> 115</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">os</tt> </tt>
<a name="L116"></a><tt class="py-lineno"> 116</tt>  <tt class="py-line">    <tt class="py-name">rcFN</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">getcwd</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-string">'.priithonrc.py'</tt><tt class="py-op">)</tt> </tt>
<a name="L117"></a><tt class="py-lineno"> 117</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">exists</tt><tt class="py-op">(</tt><tt class="py-name">rcFN</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L118"></a><tt class="py-lineno"> 118</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">rcFN</tt> </tt>
<a name="L119"></a><tt class="py-lineno"> 119</tt>  <tt class="py-line">    <tt class="py-name">rcFN</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">getcwd</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-string">'_priithonrc.py'</tt><tt class="py-op">)</tt> </tt>
<a name="L120"></a><tt class="py-lineno"> 120</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">exists</tt><tt class="py-op">(</tt><tt class="py-name">rcFN</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L121"></a><tt class="py-lineno"> 121</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">rcFN</tt> </tt>
<a name="L122"></a><tt class="py-lineno"> 122</tt>  <tt class="py-line"> </tt>
<a name="L123"></a><tt class="py-lineno"> 123</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L124"></a><tt class="py-lineno"> 124</tt>  <tt class="py-line">        <tt class="py-comment">#old path =  os.environ['PRIITHONRC']</tt> </tt>
<a name="L125"></a><tt class="py-lineno"> 125</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-name">rcFN</tt> <tt class="py-op">=</tt>  <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">environ</tt><tt class="py-op">[</tt><tt class="py-string">'PRIITHONRC'</tt><tt class="py-op">]</tt> </tt>
<a name="L126"></a><tt class="py-lineno"> 126</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">KeyError</tt><tt class="py-op">:</tt> </tt>
<a name="L127"></a><tt class="py-lineno"> 127</tt>  <tt class="py-line">        <tt class="py-keyword">pass</tt> </tt>
<a name="L128"></a><tt class="py-lineno"> 128</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L129"></a><tt class="py-lineno"> 129</tt>  <tt class="py-line">        <tt class="py-comment">#  rcFN = os.path.join( path, '.priithonrc.py')</tt> </tt>
<a name="L130"></a><tt class="py-lineno"> 130</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#  if os.path.exists(rcFN):</tt> </tt>
<a name="L131"></a><tt class="py-lineno"> 131</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-keyword">return</tt> <tt class="py-name">rcFN</tt> </tt>
<a name="L132"></a><tt class="py-lineno"> 132</tt>  <tt class="py-line"> </tt>
<a name="L133"></a><tt class="py-lineno"> 133</tt>  <tt class="py-line">    <tt class="py-name">path</tt> <tt class="py-op">=</tt> <tt id="link-27" class="py-name" targets="Function Priithon.useful.getHomeDir()=Priithon.useful-module.html#getHomeDir"><a title="Priithon.useful.getHomeDir" class="py-name" href="#" onclick="return doclink('link-27', 'getHomeDir', 'link-27');">getHomeDir</a></tt><tt class="py-op">(</tt><tt class="py-name">defaultToCwd</tt><tt class="py-op">=</tt><tt id="link-28" class="py-name" targets="Variable Priithon.wxPyPlot.False=Priithon.wxPyPlot-module.html#False"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-28', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt> </tt>
<a name="L134"></a><tt class="py-lineno"> 134</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">path</tt><tt class="py-op">:</tt> </tt>
<a name="L135"></a><tt class="py-lineno"> 135</tt>  <tt class="py-line">        <tt class="py-name">rcFN</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt> <tt class="py-name">path</tt><tt class="py-op">,</tt> <tt class="py-string">'.priithonrc.py'</tt><tt class="py-op">)</tt> </tt>
<a name="L136"></a><tt class="py-lineno"> 136</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">exists</tt><tt class="py-op">(</tt><tt class="py-name">rcFN</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L137"></a><tt class="py-lineno"> 137</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">rcFN</tt> </tt>
<a name="L138"></a><tt class="py-lineno"> 138</tt>  <tt class="py-line">        <tt class="py-name">rcFN</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt> <tt class="py-name">path</tt><tt class="py-op">,</tt> <tt class="py-string">'_priithonrc.py'</tt><tt class="py-op">)</tt> </tt>
<a name="L139"></a><tt class="py-lineno"> 139</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">exists</tt><tt class="py-op">(</tt><tt class="py-name">rcFN</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L140"></a><tt class="py-lineno"> 140</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">rcFN</tt> </tt>
<a name="L141"></a><tt class="py-lineno"> 141</tt>  <tt class="py-line"> </tt>
<a name="L142"></a><tt class="py-lineno"> 142</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-string">""</tt> </tt>
</div><a name="L143"></a><tt class="py-lineno"> 143</tt>  <tt class="py-line">     </tt>
<a name="getHomeDir"></a><div id="getHomeDir-def"><a name="L144"></a><tt class="py-lineno"> 144</tt> <a class="py-toggle" href="#" id="getHomeDir-toggle" onclick="return toggle('getHomeDir');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#getHomeDir">getHomeDir</a><tt class="py-op">(</tt><tt class="py-param">defaultToCwd</tt><tt class="py-op">=</tt><tt id="link-29" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-29', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="getHomeDir-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="getHomeDir-expanded"><a name="L145"></a><tt class="py-lineno"> 145</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L146"></a><tt class="py-lineno"> 146</tt>  <tt class="py-line"><tt class="py-docstring">    Try to find user's home directory, otherwise return current directory.</tt> </tt>
<a name="L147"></a><tt class="py-lineno"> 147</tt>  <tt class="py-line"><tt class="py-docstring">    If defaultToCwd is False, returns "" in case nothing else works</tt> </tt>
<a name="L148"></a><tt class="py-lineno"> 148</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L149"></a><tt class="py-lineno"> 149</tt>  <tt class="py-line">    <tt class="py-comment">#original: http://mail.python.org/pipermail/python-list/2005-February/305394.html</tt> </tt>
<a name="L150"></a><tt class="py-lineno"> 150</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#          Subject: Finding user's home dir</tt> </tt>
<a name="L151"></a><tt class="py-lineno"> 151</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#          From: Nemesis nemesis at nowhere.invalid </tt> </tt>
<a name="L152"></a><tt class="py-lineno"> 152</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#          Date: Wed Feb 2 20:26:00 CET 2005</tt> </tt>
<a name="L153"></a><tt class="py-lineno"> 153</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#          def getHomeDir():</tt> </tt>
<a name="L154"></a><tt class="py-lineno"> 154</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#              ''' Try to find user's home directory, otherwise return current directory.'''</tt> </tt>
<a name="L155"></a><tt class="py-lineno"> 155</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">import</tt> <tt class="py-name">os</tt> </tt>
<a name="L156"></a><tt class="py-lineno"> 156</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L157"></a><tt class="py-lineno"> 157</tt>  <tt class="py-line">        <tt class="py-name">path1</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">expanduser</tt><tt class="py-op">(</tt><tt class="py-string">"~"</tt><tt class="py-op">)</tt> </tt>
<a name="L158"></a><tt class="py-lineno"> 158</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt><tt class="py-op">:</tt> </tt>
<a name="L159"></a><tt class="py-lineno"> 159</tt>  <tt class="py-line">        <tt class="py-name">path1</tt><tt class="py-op">=</tt><tt class="py-string">""</tt> </tt>
<a name="L160"></a><tt class="py-lineno"> 160</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L161"></a><tt class="py-lineno"> 161</tt>  <tt class="py-line">        <tt class="py-name">path2</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">environ</tt><tt class="py-op">[</tt><tt class="py-string">"HOME"</tt><tt class="py-op">]</tt> </tt>
<a name="L162"></a><tt class="py-lineno"> 162</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt><tt class="py-op">:</tt> </tt>
<a name="L163"></a><tt class="py-lineno"> 163</tt>  <tt class="py-line">        <tt class="py-name">path2</tt><tt class="py-op">=</tt><tt class="py-string">""</tt> </tt>
<a name="L164"></a><tt class="py-lineno"> 164</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L165"></a><tt class="py-lineno"> 165</tt>  <tt class="py-line">        <tt class="py-name">path3</tt><tt class="py-op">=</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">environ</tt><tt class="py-op">[</tt><tt class="py-string">"USERPROFILE"</tt><tt class="py-op">]</tt> </tt>
<a name="L166"></a><tt class="py-lineno"> 166</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt><tt class="py-op">:</tt> </tt>
<a name="L167"></a><tt class="py-lineno"> 167</tt>  <tt class="py-line">        <tt class="py-name">path3</tt><tt class="py-op">=</tt><tt class="py-string">""</tt> </tt>
<a name="L168"></a><tt class="py-lineno"> 168</tt>  <tt class="py-line"> </tt>
<a name="L169"></a><tt class="py-lineno"> 169</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">exists</tt><tt class="py-op">(</tt><tt class="py-name">path1</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L170"></a><tt class="py-lineno"> 170</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">exists</tt><tt class="py-op">(</tt><tt class="py-name">path2</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L171"></a><tt class="py-lineno"> 171</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">exists</tt><tt class="py-op">(</tt><tt class="py-name">path3</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L172"></a><tt class="py-lineno"> 172</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">defaultToCwd</tt><tt class="py-op">:</tt> </tt>
<a name="L173"></a><tt class="py-lineno"> 173</tt>  <tt class="py-line">                    <tt class="py-keyword">return</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">getcwd</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L174"></a><tt class="py-lineno"> 174</tt>  <tt class="py-line">                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> <tt class="py-keyword">return</tt> <tt class="py-string">""</tt> </tt>
<a name="L175"></a><tt class="py-lineno"> 175</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> <tt class="py-keyword">return</tt> <tt class="py-name">path3</tt> </tt>
<a name="L176"></a><tt class="py-lineno"> 176</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> <tt class="py-keyword">return</tt> <tt class="py-name">path2</tt> </tt>
<a name="L177"></a><tt class="py-lineno"> 177</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> <tt class="py-keyword">return</tt> <tt class="py-name">path1</tt> </tt>
</div><a name="L178"></a><tt class="py-lineno"> 178</tt>  <tt class="py-line"> </tt>
<a name="L179"></a><tt class="py-lineno"> 179</tt>  <tt class="py-line"> </tt>
<a name="L180"></a><tt class="py-lineno"> 180</tt>  <tt class="py-line"> </tt>
<a name="_getSourceCodeLine"></a><div id="_getSourceCodeLine-def"><a name="L181"></a><tt class="py-lineno"> 181</tt> <a class="py-toggle" href="#" id="_getSourceCodeLine-toggle" onclick="return toggle('_getSourceCodeLine');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_getSourceCodeLine">_getSourceCodeLine</a><tt class="py-op">(</tt><tt class="py-param">depth</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_getSourceCodeLine-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_getSourceCodeLine-expanded"><a name="L182"></a><tt class="py-lineno"> 182</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L183"></a><tt class="py-lineno"> 183</tt>  <tt class="py-line"><tt class="py-docstring">    return "current" line number of source code  inside py-file </tt> </tt>
<a name="L184"></a><tt class="py-lineno"> 184</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L185"></a><tt class="py-lineno"> 185</tt>  <tt class="py-line"><tt class="py-docstring">    (to be used only inside py-modules - not for interactive shell!)</tt> </tt>
<a name="L186"></a><tt class="py-lineno"> 186</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L187"></a><tt class="py-lineno"> 187</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt id="link-30" class="py-name" targets="Function Priithon.usefulX.inspect()=Priithon.usefulX-module.html#inspect"><a title="Priithon.usefulX.inspect" class="py-name" href="#" onclick="return doclink('link-30', 'inspect', 'link-30');">inspect</a></tt> </tt>
<a name="L188"></a><tt class="py-lineno"> 188</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-31" class="py-name"><a title="Priithon.usefulX.inspect" class="py-name" href="#" onclick="return doclink('link-31', 'inspect', 'link-30');">inspect</a></tt><tt class="py-op">.</tt><tt class="py-name">currentframe</tt><tt class="py-op">(</tt><tt class="py-name">depth</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">f_back</tt><tt class="py-op">.</tt><tt class="py-name">f_lineno</tt> </tt>
</div><a name="L189"></a><tt class="py-lineno"> 189</tt>  <tt class="py-line"> </tt>
<a name="_getSourceCodeFilename"></a><div id="_getSourceCodeFilename-def"><a name="L190"></a><tt class="py-lineno"> 190</tt> <a class="py-toggle" href="#" id="_getSourceCodeFilename-toggle" onclick="return toggle('_getSourceCodeFilename');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_getSourceCodeFilename">_getSourceCodeFilename</a><tt class="py-op">(</tt><tt class="py-param">numPathTails</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">depth</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_getSourceCodeFilename-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_getSourceCodeFilename-expanded"><a name="L191"></a><tt class="py-lineno"> 191</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L192"></a><tt class="py-lineno"> 192</tt>  <tt class="py-line"><tt class="py-docstring">    return "current" filename of py-file </tt> </tt>
<a name="L193"></a><tt class="py-lineno"> 193</tt>  <tt class="py-line"><tt class="py-docstring">    if numPathTails:</tt> </tt>
<a name="L194"></a><tt class="py-lineno"> 194</tt>  <tt class="py-line"><tt class="py-docstring">        split off all leading folder before the last numPathTails parts,</tt> </tt>
<a name="L195"></a><tt class="py-lineno"> 195</tt>  <tt class="py-line"><tt class="py-docstring">        and return only those remaining parts;</tt> </tt>
<a name="L196"></a><tt class="py-lineno"> 196</tt>  <tt class="py-line"><tt class="py-docstring">        e.g. for numPathTails=2: for "/a/b/c/d/e.py" return "d/e.py"</tt> </tt>
<a name="L197"></a><tt class="py-lineno"> 197</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L198"></a><tt class="py-lineno"> 198</tt>  <tt class="py-line"><tt class="py-docstring">    (to be used only inside py-modules - not for interactive shell!)</tt> </tt>
<a name="L199"></a><tt class="py-lineno"> 199</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L200"></a><tt class="py-lineno"> 200</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt id="link-32" class="py-name"><a title="Priithon.usefulX.inspect" class="py-name" href="#" onclick="return doclink('link-32', 'inspect', 'link-30');">inspect</a></tt> </tt>
<a name="L201"></a><tt class="py-lineno"> 201</tt>  <tt class="py-line">    <tt class="py-name">fn</tt><tt class="py-op">=</tt> <tt id="link-33" class="py-name"><a title="Priithon.usefulX.inspect" class="py-name" href="#" onclick="return doclink('link-33', 'inspect', 'link-30');">inspect</a></tt><tt class="py-op">.</tt><tt class="py-name">currentframe</tt><tt class="py-op">(</tt><tt class="py-name">depth</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">f_back</tt><tt class="py-op">.</tt><tt class="py-name">f_code</tt><tt class="py-op">.</tt><tt class="py-name">co_filename</tt> </tt>
<a name="L202"></a><tt class="py-lineno"> 202</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">numPathTails</tt><tt class="py-op">:</tt> </tt>
<a name="L203"></a><tt class="py-lineno"> 203</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-string">'/'</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-string">'/'</tt><tt class="py-op">)</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-name">numPathTails</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L204"></a><tt class="py-lineno"> 204</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L205"></a><tt class="py-lineno"> 205</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">fn</tt> </tt>
</div><a name="L206"></a><tt class="py-lineno"> 206</tt>  <tt class="py-line"> </tt>
<a name="_getSourceCodeFuncName"></a><div id="_getSourceCodeFuncName-def"><a name="L207"></a><tt class="py-lineno"> 207</tt> <a class="py-toggle" href="#" id="_getSourceCodeFuncName-toggle" onclick="return toggle('_getSourceCodeFuncName');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_getSourceCodeFuncName">_getSourceCodeFuncName</a><tt class="py-op">(</tt><tt class="py-param">depth</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_getSourceCodeFuncName-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_getSourceCodeFuncName-expanded"><a name="L208"></a><tt class="py-lineno"> 208</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L209"></a><tt class="py-lineno"> 209</tt>  <tt class="py-line"><tt class="py-docstring">    return "current" function name </tt> </tt>
<a name="L210"></a><tt class="py-lineno"> 210</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L211"></a><tt class="py-lineno"> 211</tt>  <tt class="py-line"><tt class="py-docstring">    (to be used only inside py-modules - not for interactive shell!)</tt> </tt>
<a name="L212"></a><tt class="py-lineno"> 212</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L213"></a><tt class="py-lineno"> 213</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt id="link-34" class="py-name"><a title="Priithon.usefulX.inspect" class="py-name" href="#" onclick="return doclink('link-34', 'inspect', 'link-30');">inspect</a></tt> </tt>
<a name="L214"></a><tt class="py-lineno"> 214</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-35" class="py-name"><a title="Priithon.usefulX.inspect" class="py-name" href="#" onclick="return doclink('link-35', 'inspect', 'link-30');">inspect</a></tt><tt class="py-op">.</tt><tt class="py-name">currentframe</tt><tt class="py-op">(</tt><tt class="py-name">depth</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">f_back</tt><tt class="py-op">.</tt><tt class="py-name">f_code</tt><tt class="py-op">.</tt><tt class="py-name">co_name</tt> </tt>
</div><a name="L215"></a><tt class="py-lineno"> 215</tt>  <tt class="py-line"> </tt>
<a name="_getSourceCodeLocation"></a><div id="_getSourceCodeLocation-def"><a name="L216"></a><tt class="py-lineno"> 216</tt> <a class="py-toggle" href="#" id="_getSourceCodeLocation-toggle" onclick="return toggle('_getSourceCodeLocation');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_getSourceCodeLocation">_getSourceCodeLocation</a><tt class="py-op">(</tt><tt class="py-param">numPathTails</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">depth</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_getSourceCodeLocation-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_getSourceCodeLocation-expanded"><a name="L217"></a><tt class="py-lineno"> 217</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L218"></a><tt class="py-lineno"> 218</tt>  <tt class="py-line"><tt class="py-docstring">    return &lt;filename&gt;:&lt;lineNo</tt> </tt>
<a name="L219"></a><tt class="py-lineno"> 219</tt>  <tt class="py-line"><tt class="py-docstring">    concatenating the results of</tt> </tt>
<a name="L220"></a><tt class="py-lineno"> 220</tt>  <tt class="py-line"><tt class="py-docstring">    _getSourceCodeFilename  and _getSourceCodeLine</tt> </tt>
<a name="L221"></a><tt class="py-lineno"> 221</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L222"></a><tt class="py-lineno"> 222</tt>  <tt class="py-line"><tt class="py-docstring">    (to be used only inside py-modules - not for interactive shell!)</tt> </tt>
<a name="L223"></a><tt class="py-lineno"> 223</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L224"></a><tt class="py-lineno"> 224</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-string">"%s:%d"</tt><tt class="py-op">%</tt><tt class="py-op">(</tt><tt id="link-36" class="py-name" targets="Function Priithon.useful._getSourceCodeFilename()=Priithon.useful-module.html#_getSourceCodeFilename"><a title="Priithon.useful._getSourceCodeFilename" class="py-name" href="#" onclick="return doclink('link-36', '_getSourceCodeFilename', 'link-36');">_getSourceCodeFilename</a></tt><tt class="py-op">(</tt><tt class="py-name">numPathTails</tt><tt class="py-op">,</tt> <tt class="py-name">depth</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L225"></a><tt class="py-lineno"> 225</tt>  <tt class="py-line">                    <tt id="link-37" class="py-name" targets="Function Priithon.useful._getSourceCodeLine()=Priithon.useful-module.html#_getSourceCodeLine"><a title="Priithon.useful._getSourceCodeLine" class="py-name" href="#" onclick="return doclink('link-37', '_getSourceCodeLine', 'link-37');">_getSourceCodeLine</a></tt><tt class="py-op">(</tt><tt class="py-name">depth</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L226"></a><tt class="py-lineno"> 226</tt>  <tt class="py-line"> </tt>
<a name="_raiseRuntimeError"></a><div id="_raiseRuntimeError-def"><a name="L227"></a><tt class="py-lineno"> 227</tt> <a class="py-toggle" href="#" id="_raiseRuntimeError-toggle" onclick="return toggle('_raiseRuntimeError');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_raiseRuntimeError">_raiseRuntimeError</a><tt class="py-op">(</tt><tt class="py-param">msg</tt><tt class="py-op">,</tt> <tt class="py-param">appendSourceCodeLocation</tt><tt class="py-op">=</tt><tt id="link-38" class="py-name" targets="Variable Priithon.wxPyPlot.True=Priithon.wxPyPlot-module.html#True"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-38', 'True', 'link-38');">True</a></tt><tt class="py-op">,</tt> <tt class="py-param">numPathTails</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_raiseRuntimeError-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_raiseRuntimeError-expanded"><a name="L228"></a><tt class="py-lineno"> 228</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L229"></a><tt class="py-lineno"> 229</tt>  <tt class="py-line"><tt class="py-docstring">    use this only inside an except clause</tt> </tt>
<a name="L230"></a><tt class="py-lineno"> 230</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L231"></a><tt class="py-lineno"> 231</tt>  <tt class="py-line">    <tt class="py-comment">#import traceback</tt> </tt>
<a name="L232"></a><tt class="py-lineno"> 232</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">import</tt> <tt class="py-name">sys</tt> </tt>
<a name="L233"></a><tt class="py-lineno"> 233</tt>  <tt class="py-line">    <tt class="py-name">exc_info</tt> <tt class="py-op">=</tt> <tt class="py-name">sys</tt><tt class="py-op">.</tt><tt class="py-name">exc_info</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L234"></a><tt class="py-lineno"> 234</tt>  <tt class="py-line">    <tt class="py-name">exc_info</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">RuntimeError</tt><tt class="py-op">,</tt>  </tt>
<a name="L235"></a><tt class="py-lineno"> 235</tt>  <tt class="py-line">                <tt class="py-name">RuntimeError</tt><tt class="py-op">(</tt><tt id="link-39" class="py-name" targets="Variable Priithon.wxPyPlot.msg=Priithon.wxPyPlot-module.html#msg"><a title="Priithon.wxPyPlot.msg" class="py-name" href="#" onclick="return doclink('link-39', 'msg', 'link-39');">msg</a></tt> <tt class="py-op">+</tt> <tt class="py-string">"\n"</tt> <tt class="py-op">+</tt> <tt class="py-comment">#"Cannot open file as image\n"+</tt> </tt>
<a name="L236"></a><tt class="py-lineno"> 236</tt>  <tt class="py-line">                             <tt id="link-40" class="py-name" targets="Function Priithon.useful._getSourceCodeLocation()=Priithon.useful-module.html#_getSourceCodeLocation"><a title="Priithon.useful._getSourceCodeLocation" class="py-name" href="#" onclick="return doclink('link-40', '_getSourceCodeLocation', 'link-40');">_getSourceCodeLocation</a></tt><tt class="py-op">(</tt><tt class="py-name">numPathTails</tt><tt class="py-op">,</tt> <tt class="py-name">depth</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L237"></a><tt class="py-lineno"> 237</tt>  <tt class="py-line">                             <tt class="py-comment">#"   (%s line:%s)\n"%(currentfile(2),currentline())</tt> </tt>
<a name="L238"></a><tt class="py-lineno"> 238</tt>  <tt class="py-line">                             <tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-comment">#"prior error: "+''.join(traceback.format_exception_only(exc_info[0], exc_info[1]),)),</tt> </tt>
<a name="L239"></a><tt class="py-lineno"> 239</tt>  <tt class="py-line">                <tt class="py-name">exc_info</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L240"></a><tt class="py-lineno"> 240</tt>  <tt class="py-line">    <tt class="py-keyword">raise</tt> <tt class="py-name">exc_info</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">exc_info</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">exc_info</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt> </tt>
</div><a name="L241"></a><tt class="py-lineno"> 241</tt>  <tt class="py-line">     </tt>
<a name="L242"></a><tt class="py-lineno"> 242</tt>  <tt class="py-line"> </tt>
<a name="L243"></a><tt class="py-lineno"> 243</tt>  <tt class="py-line"> </tt>
<a name="L244"></a><tt class="py-lineno"> 244</tt>  <tt class="py-line"> </tt>
<a name="L245"></a><tt class="py-lineno"> 245</tt>  <tt class="py-line"> </tt>
<a name="_getGoodifiedArray"></a><div id="_getGoodifiedArray-def"><a name="L246"></a><tt class="py-lineno"> 246</tt> <a class="py-toggle" href="#" id="_getGoodifiedArray-toggle" onclick="return toggle('_getGoodifiedArray');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_getGoodifiedArray">_getGoodifiedArray</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_getGoodifiedArray-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_getGoodifiedArray-expanded"><a name="L247"></a><tt class="py-lineno"> 247</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L248"></a><tt class="py-lineno"> 248</tt>  <tt class="py-line"><tt class="py-docstring">    return "well behaved" version of a numpy array</tt> </tt>
<a name="L249"></a><tt class="py-lineno"> 249</tt>  <tt class="py-line"><tt class="py-docstring">    1) convert lists or tuple to numpy-array</tt> </tt>
<a name="L250"></a><tt class="py-lineno"> 250</tt>  <tt class="py-line"><tt class="py-docstring">    2) make copy of numpy arrays if non-contigous or non-native</tt> </tt>
<a name="L251"></a><tt class="py-lineno"> 251</tt>  <tt class="py-line"><tt class="py-docstring">    3) convert(relabel) dtype=bool to dtype=uint8 (arr.view(N.uint8))</tt> </tt>
<a name="L252"></a><tt class="py-lineno"> 252</tt>  <tt class="py-line"><tt class="py-docstring">    (used in conjunction with SWIGed functions)</tt> </tt>
<a name="L253"></a><tt class="py-lineno"> 253</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L254"></a><tt class="py-lineno"> 254</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L255"></a><tt class="py-lineno"> 255</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-41" class="py-name" targets="Function Priithon.useful.arr()=Priithon.useful-module.html#arr"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-41', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-42" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-42', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">isnative</tt><tt class="py-op">:</tt> </tt>
<a name="L256"></a><tt class="py-lineno"> 256</tt>  <tt class="py-line">            <tt id="link-43" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-43', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ascontiguousarray</tt><tt class="py-op">(</tt><tt id="link-44" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-44', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L257"></a><tt class="py-lineno"> 257</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L258"></a><tt class="py-lineno"> 258</tt>  <tt class="py-line">            <tt id="link-45" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-45', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ascontiguousarray</tt><tt class="py-op">(</tt><tt id="link-46" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-46', 'arr', 'link-41');">arr</a></tt><tt class="py-op">,</tt> <tt id="link-47" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-47', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-48" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-48', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">newbyteorder</tt><tt class="py-op">(</tt><tt class="py-string">'='</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L259"></a><tt class="py-lineno"> 259</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">AttributeError</tt><tt class="py-op">:</tt> </tt>
<a name="L260"></a><tt class="py-lineno"> 260</tt>  <tt class="py-line">            <tt id="link-49" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-49', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ascontiguousarray</tt><tt class="py-op">(</tt><tt id="link-50" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-50', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L261"></a><tt class="py-lineno"> 261</tt>  <tt class="py-line"> </tt>
<a name="L262"></a><tt class="py-lineno"> 262</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-51" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-51', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-52" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-52', 'dtype', 'link-19');">dtype</a></tt> <tt class="py-op">==</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">bool</tt><tt class="py-op">:</tt>  <tt class="py-comment"># no SWIGed function for bool, use uint8</tt> </tt>
<a name="L263"></a><tt class="py-lineno"> 263</tt>  <tt class="py-line">        <tt id="link-53" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-53', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-54" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-54', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-55" class="py-name" targets="Method Priithon.mockNDarray.mockNDarray.view()=Priithon.mockNDarray.mockNDarray-class.html#view,Function Priithon.viewer.view()=Priithon.viewer-module.html#view,Function Priithon.viewer2.view()=Priithon.viewer2-module.html#view"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-55', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt><tt class="py-op">)</tt> </tt>
<a name="L264"></a><tt class="py-lineno"> 264</tt>  <tt class="py-line"> </tt>
<a name="L265"></a><tt class="py-lineno"> 265</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-56" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-56', 'arr', 'link-41');">arr</a></tt> </tt>
</div><a name="L266"></a><tt class="py-lineno"> 266</tt>  <tt class="py-line"> </tt>
<a name="naSetArrayPrintMode"></a><div id="naSetArrayPrintMode-def"><a name="L267"></a><tt class="py-lineno"> 267</tt> <a class="py-toggle" href="#" id="naSetArrayPrintMode-toggle" onclick="return toggle('naSetArrayPrintMode');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#naSetArrayPrintMode">naSetArrayPrintMode</a><tt class="py-op">(</tt><tt class="py-param">precision</tt><tt class="py-op">=</tt><tt class="py-number">4</tt><tt class="py-op">,</tt> <tt class="py-param">suppress_small</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="naSetArrayPrintMode-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="naSetArrayPrintMode-expanded"><a name="L268"></a><tt class="py-lineno"> 268</tt>  <tt class="py-line">    <tt class="py-comment">#import sys</tt> </tt>
<a name="L269"></a><tt class="py-lineno"> 269</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#sys.float_output_suppress_small=suppress_small</tt> </tt>
<a name="L270"></a><tt class="py-lineno"> 270</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#na.arrayprint.set_precision(precision)</tt> </tt>
<a name="L271"></a><tt class="py-lineno"> 271</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">set_printoptions</tt><tt class="py-op">(</tt><tt class="py-name">precision</tt><tt class="py-op">=</tt><tt class="py-name">precision</tt><tt class="py-op">,</tt> <tt class="py-name">threshold</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> </tt>
<a name="L272"></a><tt class="py-lineno"> 272</tt>  <tt class="py-line">                       <tt class="py-name">edgeitems</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-name">linewidth</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> </tt>
<a name="L273"></a><tt class="py-lineno"> 273</tt>  <tt class="py-line">                       <tt class="py-name">suppress</tt><tt class="py-op">=</tt><tt class="py-name">suppress_small</tt><tt class="py-op">)</tt> </tt>
</div><a name="L274"></a><tt class="py-lineno"> 274</tt>  <tt class="py-line"> </tt>
<a name="debug"></a><div id="debug-def"><a name="L275"></a><tt class="py-lineno"> 275</tt> <a class="py-toggle" href="#" id="debug-toggle" onclick="return toggle('debug');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#debug">debug</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="debug-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="debug-expanded"><a name="L276"></a><tt class="py-lineno"> 276</tt>  <tt class="py-line">    <tt class="py-docstring">"""calls post-mortem-debugger  pdm.pm()</tt> </tt>
<a name="L277"></a><tt class="py-lineno"> 277</tt>  <tt class="py-line"><tt class="py-docstring">    commands:</tt> </tt>
<a name="L278"></a><tt class="py-lineno"> 278</tt>  <tt class="py-line"><tt class="py-docstring">        q - quit</tt> </tt>
<a name="L279"></a><tt class="py-lineno"> 279</tt>  <tt class="py-line"><tt class="py-docstring">        l - list</tt> </tt>
<a name="L280"></a><tt class="py-lineno"> 280</tt>  <tt class="py-line"><tt class="py-docstring">        p - print 'variable'</tt> </tt>
<a name="L281"></a><tt class="py-lineno"> 281</tt>  <tt class="py-line"><tt class="py-docstring">        u - up in calling stack</tt> </tt>
<a name="L282"></a><tt class="py-lineno"> 282</tt>  <tt class="py-line"><tt class="py-docstring">        d - down in calling stack</tt> </tt>
<a name="L283"></a><tt class="py-lineno"> 283</tt>  <tt class="py-line"><tt class="py-docstring">        h - help</tt> </tt>
<a name="L284"></a><tt class="py-lineno"> 284</tt>  <tt class="py-line"><tt class="py-docstring">        ...</tt> </tt>
<a name="L285"></a><tt class="py-lineno"> 285</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L286"></a><tt class="py-lineno"> 286</tt>  <tt class="py-line">    <tt class="py-name">pdb</tt><tt class="py-op">.</tt><tt class="py-name">pm</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L287"></a><tt class="py-lineno"> 287</tt>  <tt class="py-line"> </tt>
<a name="DEBUG_HERE"></a><div id="DEBUG_HERE-def"><a name="L288"></a><tt class="py-lineno"> 288</tt> <a class="py-toggle" href="#" id="DEBUG_HERE-toggle" onclick="return toggle('DEBUG_HERE');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#DEBUG_HERE">DEBUG_HERE</a><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="DEBUG_HERE-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="DEBUG_HERE-expanded"><a name="L289"></a><tt class="py-lineno"> 289</tt>  <tt class="py-line">    <tt class="py-docstring">"""calls debugger  pdm.set_trace()</tt> </tt>
<a name="L290"></a><tt class="py-lineno"> 290</tt>  <tt class="py-line"><tt class="py-docstring">       go into debugger mode once execution reaches this line</tt> </tt>
<a name="L291"></a><tt class="py-lineno"> 291</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L292"></a><tt class="py-lineno"> 292</tt>  <tt class="py-line">    <tt class="py-name">pdb</tt><tt class="py-op">.</tt><tt class="py-name">set_trace</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L293"></a><tt class="py-lineno"> 293</tt>  <tt class="py-line"> </tt>
<a name="L294"></a><tt class="py-lineno"> 294</tt>  <tt class="py-line"> </tt>
<a name="timeIt"></a><div id="timeIt-def"><a name="L295"></a><tt class="py-lineno"> 295</tt> <a class="py-toggle" href="#" id="timeIt-toggle" onclick="return toggle('timeIt');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#timeIt">timeIt</a><tt class="py-op">(</tt><tt class="py-param">execStr</tt><tt class="py-op">,</tt> <tt class="py-param">nReps</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-param">useTime</tt><tt class="py-op">=</tt><tt id="link-57" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-57', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="timeIt-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="timeIt-expanded"><a name="L296"></a><tt class="py-lineno"> 296</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L297"></a><tt class="py-lineno"> 297</tt>  <tt class="py-line"><tt class="py-docstring">    calls exec(execStr)  nReps times</tt> </tt>
<a name="L298"></a><tt class="py-lineno"> 298</tt>  <tt class="py-line"><tt class="py-docstring">    returns "cpu-time-after"-"cpu-time-before"</tt> </tt>
<a name="L299"></a><tt class="py-lineno"> 299</tt>  <tt class="py-line"><tt class="py-docstring">    if nReps &gt; 1  the it calls it nReps times</tt> </tt>
<a name="L300"></a><tt class="py-lineno"> 300</tt>  <tt class="py-line"><tt class="py-docstring">                  and return mmms over all (each separately timed!)</tt> </tt>
<a name="L301"></a><tt class="py-lineno"> 301</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L302"></a><tt class="py-lineno"> 302</tt>  <tt class="py-line"><tt class="py-docstring">    if useTime is False: use time.clock() as timer</tt> </tt>
<a name="L303"></a><tt class="py-lineno"> 303</tt>  <tt class="py-line"><tt class="py-docstring">    if useTime is a callable: use this as time</tt> </tt>
<a name="L304"></a><tt class="py-lineno"> 304</tt>  <tt class="py-line"><tt class="py-docstring">    otherwise: use time.time()</tt> </tt>
<a name="L305"></a><tt class="py-lineno"> 305</tt>  <tt class="py-line"><tt class="py-docstring">    NOTE: on Unix time.clock() gives CPU time, time.time() wall time</tt> </tt>
<a name="L306"></a><tt class="py-lineno"> 306</tt>  <tt class="py-line"><tt class="py-docstring">          on Windows both are wall time (time.time() ONLY at 1ms resolution)</tt> </tt>
<a name="L307"></a><tt class="py-lineno"> 307</tt>  <tt class="py-line"><tt class="py-docstring">          http://stackoverflow.com/questions/85451/python-time-clock-vs-time-time-accuracy</tt> </tt>
<a name="L308"></a><tt class="py-lineno"> 308</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L309"></a><tt class="py-lineno"> 309</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">sys</tt><tt class="py-op">,</tt> <tt class="py-name">time</tt> </tt>
<a name="L310"></a><tt class="py-lineno"> 310</tt>  <tt class="py-line">    <tt class="py-keyword">global</tt> <tt class="py-name">fr</tt><tt class="py-op">,</tt><tt class="py-name">fc</tt><tt class="py-op">,</tt> <tt class="py-name">argsn</tt><tt class="py-op">,</tt> <tt class="py-name">args</tt> </tt>
<a name="L311"></a><tt class="py-lineno"> 311</tt>  <tt class="py-line">    <tt class="py-name">fr</tt> <tt class="py-op">=</tt> <tt class="py-name">sys</tt><tt class="py-op">.</tt><tt class="py-name">_getframe</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L312"></a><tt class="py-lineno"> 312</tt>  <tt class="py-line">    <tt class="py-comment"># fc = fr.f_code</tt> </tt>
<a name="L313"></a><tt class="py-lineno"> 313</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#gs = fr.f_locals   #gs = fr.f_globals</tt> </tt>
<a name="L314"></a><tt class="py-lineno"> 314</tt>  <tt class="py-line"><tt class="py-comment"></tt>     </tt>
<a name="L315"></a><tt class="py-lineno"> 315</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">callable</tt><tt class="py-op">(</tt><tt class="py-name">useTime</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L316"></a><tt class="py-lineno"> 316</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">useTime</tt><tt class="py-op">:</tt> </tt>
<a name="L317"></a><tt class="py-lineno"> 317</tt>  <tt class="py-line">            <tt class="py-name">useTime</tt> <tt class="py-op">=</tt> <tt class="py-name">time</tt><tt class="py-op">.</tt><tt class="py-name">time</tt> </tt>
<a name="L318"></a><tt class="py-lineno"> 318</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L319"></a><tt class="py-lineno"> 319</tt>  <tt class="py-line">            <tt class="py-name">useTime</tt> <tt class="py-op">=</tt> <tt class="py-name">time</tt><tt class="py-op">.</tt><tt class="py-name">clock</tt> </tt>
<a name="L320"></a><tt class="py-lineno"> 320</tt>  <tt class="py-line"> </tt>
<a name="L321"></a><tt class="py-lineno"> 321</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">nReps</tt><tt class="py-op">==</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L322"></a><tt class="py-lineno"> 322</tt>  <tt class="py-line">        <tt class="py-name">t0</tt> <tt class="py-op">=</tt> <tt class="py-name">useTime</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L323"></a><tt class="py-lineno"> 323</tt>  <tt class="py-line">        <tt class="py-keyword">exec</tt> <tt class="py-name">execStr</tt> <tt class="py-keyword">in</tt> <tt class="py-name">fr</tt><tt class="py-op">.</tt><tt class="py-name">f_locals</tt><tt class="py-op">,</tt> <tt class="py-name">fr</tt><tt class="py-op">.</tt><tt class="py-name">f_globals</tt> </tt>
<a name="L324"></a><tt class="py-lineno"> 324</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">useTime</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-op">-</tt> <tt class="py-name">t0</tt> </tt>
<a name="L325"></a><tt class="py-lineno"> 325</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L326"></a><tt class="py-lineno"> 326</tt>  <tt class="py-line">        <tt class="py-name">_ttt</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-58" class="py-name" targets="Variable Priithon.mockNDarray.mockNDarray.shape=Priithon.mockNDarray.mockNDarray-class.html#shape"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-58', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-name">nReps</tt><tt class="py-op">,</tt> <tt id="link-59" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-59', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float64</tt><tt class="py-op">)</tt> </tt>
<a name="L327"></a><tt class="py-lineno"> 327</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">_i</tt> <tt class="py-keyword">in</tt> <tt id="link-60" class="py-name" targets="Method Priithon.plt.plot_objects.axis_object.range()=Priithon.plt.plot_objects.axis_object-class.html#range"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-60', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">nReps</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L328"></a><tt class="py-lineno"> 328</tt>  <tt class="py-line">            <tt class="py-name">t0</tt> <tt class="py-op">=</tt> <tt class="py-name">useTime</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L329"></a><tt class="py-lineno"> 329</tt>  <tt class="py-line">            <tt class="py-keyword">exec</tt> <tt class="py-name">execStr</tt>  <tt class="py-keyword">in</tt> <tt class="py-name">fr</tt><tt class="py-op">.</tt><tt class="py-name">f_locals</tt><tt class="py-op">,</tt> <tt class="py-name">fr</tt><tt class="py-op">.</tt><tt class="py-name">f_globals</tt> </tt>
<a name="L330"></a><tt class="py-lineno"> 330</tt>  <tt class="py-line">            <tt class="py-name">_ttt</tt><tt class="py-op">[</tt><tt class="py-name">_i</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">useTime</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-op">-</tt> <tt class="py-name">t0</tt> </tt>
<a name="L331"></a><tt class="py-lineno"> 331</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt id="link-61" class="py-name" targets="Function Priithon.useful.mmms()=Priithon.useful-module.html#mmms"><a title="Priithon.useful.mmms" class="py-name" href="#" onclick="return doclink('link-61', 'mmms', 'link-61');">mmms</a></tt><tt class="py-op">(</tt><tt class="py-name">_ttt</tt><tt class="py-op">)</tt> </tt>
</div><a name="L332"></a><tt class="py-lineno"> 332</tt>  <tt class="py-line"> </tt>
<a name="reload"></a><div id="reload-def"><a name="L333"></a><tt class="py-lineno"> 333</tt> <a class="py-toggle" href="#" id="reload-toggle" onclick="return toggle('reload');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#reload">reload</a><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-param">modules</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="reload-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="reload-expanded"><a name="L334"></a><tt class="py-lineno"> 334</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L335"></a><tt class="py-lineno"> 335</tt>  <tt class="py-line"><tt class="py-docstring">    shortcut for non-verbose reloading of modules</tt> </tt>
<a name="L336"></a><tt class="py-lineno"> 336</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L337"></a><tt class="py-lineno"> 337</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">__builtin__</tt> </tt>
<a name="L338"></a><tt class="py-lineno"> 338</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">m</tt> <tt class="py-keyword">in</tt> <tt class="py-name">modules</tt><tt class="py-op">:</tt> </tt>
<a name="L339"></a><tt class="py-lineno"> 339</tt>  <tt class="py-line">        <tt class="py-name">__builtin__</tt><tt class="py-op">.</tt><tt id="link-62" class="py-name" targets="Function Priithon.useful.reload()=Priithon.useful-module.html#reload"><a title="Priithon.useful.reload" class="py-name" href="#" onclick="return doclink('link-62', 'reload', 'link-62');">reload</a></tt><tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">)</tt> </tt>
</div><a name="L340"></a><tt class="py-lineno"> 340</tt>  <tt class="py-line"> </tt>
<a name="L341"></a><tt class="py-lineno"> 341</tt>  <tt class="py-line"> </tt>
<a name="reloadAll"></a><div id="reloadAll-def"><a name="L342"></a><tt class="py-lineno"> 342</tt> <a class="py-toggle" href="#" id="reloadAll-toggle" onclick="return toggle('reloadAll');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#reloadAll">reloadAll</a><tt class="py-op">(</tt><tt class="py-param">verbose</tt><tt class="py-op">=</tt><tt id="link-63" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-63', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">repeat</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-param">hiddenPriithon</tt><tt class="py-op">=</tt><tt id="link-64" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-64', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="reloadAll-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="reloadAll-expanded"><a name="L343"></a><tt class="py-lineno"> 343</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L344"></a><tt class="py-lineno"> 344</tt>  <tt class="py-line"><tt class="py-docstring">    reload all modules known in __main__</tt> </tt>
<a name="L345"></a><tt class="py-lineno"> 345</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L346"></a><tt class="py-lineno"> 346</tt>  <tt class="py-line"><tt class="py-docstring">    repeat 'repeat' times - in case of dependencies</tt> </tt>
<a name="L347"></a><tt class="py-lineno"> 347</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L348"></a><tt class="py-lineno"> 348</tt>  <tt class="py-line"><tt class="py-docstring">    if hiddenPriithon is True:</tt> </tt>
<a name="L349"></a><tt class="py-lineno"> 349</tt>  <tt class="py-line"><tt class="py-docstring">    also reload</tt> </tt>
<a name="L350"></a><tt class="py-lineno"> 350</tt>  <tt class="py-line"><tt class="py-docstring">       viewerCommon.py</tt> </tt>
<a name="L351"></a><tt class="py-lineno"> 351</tt>  <tt class="py-line"><tt class="py-docstring">       viewer.py</tt> </tt>
<a name="L352"></a><tt class="py-lineno"> 352</tt>  <tt class="py-line"><tt class="py-docstring">       viewer2.py</tt> </tt>
<a name="L353"></a><tt class="py-lineno"> 353</tt>  <tt class="py-line"><tt class="py-docstring">       histogram.py</tt> </tt>
<a name="L354"></a><tt class="py-lineno"> 354</tt>  <tt class="py-line"><tt class="py-docstring">       splitNDCommon.py</tt> </tt>
<a name="L355"></a><tt class="py-lineno"> 355</tt>  <tt class="py-line"><tt class="py-docstring">       splitND.py</tt> </tt>
<a name="L356"></a><tt class="py-lineno"> 356</tt>  <tt class="py-line"><tt class="py-docstring">       splitND2.py</tt> </tt>
<a name="L357"></a><tt class="py-lineno"> 357</tt>  <tt class="py-line"><tt class="py-docstring">       mockNDarray.py</tt> </tt>
<a name="L358"></a><tt class="py-lineno"> 358</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L359"></a><tt class="py-lineno"> 359</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">__main__</tt><tt class="py-op">,</tt> <tt class="py-name">types</tt><tt class="py-op">,</tt> <tt class="py-name">__builtin__</tt><tt class="py-op">,</tt> <tt class="py-name">sys</tt> </tt>
<a name="L360"></a><tt class="py-lineno"> 360</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-65" class="py-name" targets="Variable Priithon.viewer.i=Priithon.viewer-module.html#i,Variable Priithon.viewer2.i=Priithon.viewer2-module.html#i,Variable Priithon.viewerCommon.i=Priithon.viewerCommon-module.html#i"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-65', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-66" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-66', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">+</tt><tt class="py-name">repeat</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L361"></a><tt class="py-lineno"> 361</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">m</tt><tt class="py-op">,</tt><tt id="link-67" class="py-name" targets="Function Priithon.useful.mm()=Priithon.useful-module.html#mm"><a title="Priithon.useful.mm" class="py-name" href="#" onclick="return doclink('link-67', 'mm', 'link-67');">mm</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">__main__</tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt><tt class="py-op">.</tt><tt class="py-name">iteritems</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L362"></a><tt class="py-lineno"> 362</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt id="link-68" class="py-name"><a title="Priithon.useful.mm" class="py-name" href="#" onclick="return doclink('link-68', 'mm', 'link-67');">mm</a></tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-name">types</tt><tt class="py-op">.</tt><tt class="py-name">ModuleType</tt> <tt class="py-keyword">and</tt> <tt class="py-keyword">not</tt> <tt id="link-69" class="py-name"><a title="Priithon.useful.mm" class="py-name" href="#" onclick="return doclink('link-69', 'mm', 'link-67');">mm</a></tt> <tt class="py-keyword">in</tt> <tt class="py-op">(</tt><tt class="py-name">__builtin__</tt><tt class="py-op">,</tt> <tt class="py-name">__main__</tt><tt class="py-op">,</tt> <tt class="py-name">sys</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L363"></a><tt class="py-lineno"> 363</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">verbose</tt><tt class="py-op">:</tt> </tt>
<a name="L364"></a><tt class="py-lineno"> 364</tt>  <tt class="py-line">                    <tt class="py-keyword">print</tt> <tt class="py-name">m</tt><tt class="py-op">,</tt> </tt>
<a name="L365"></a><tt class="py-lineno"> 365</tt>  <tt class="py-line">                <tt id="link-70" class="py-name"><a title="Priithon.useful.reload" class="py-name" href="#" onclick="return doclink('link-70', 'reload', 'link-62');">reload</a></tt><tt class="py-op">(</tt><tt id="link-71" class="py-name"><a title="Priithon.useful.mm" class="py-name" href="#" onclick="return doclink('link-71', 'mm', 'link-67');">mm</a></tt><tt class="py-op">)</tt> </tt>
<a name="L366"></a><tt class="py-lineno"> 366</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">hiddenPriithon</tt><tt class="py-op">:</tt> </tt>
<a name="L367"></a><tt class="py-lineno"> 367</tt>  <tt class="py-line">            <tt class="py-name">mods</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-string">'viewerCommon'</tt><tt class="py-op">,</tt> </tt>
<a name="L368"></a><tt class="py-lineno"> 368</tt>  <tt class="py-line">                    <tt class="py-string">'viewer'</tt><tt class="py-op">,</tt> </tt>
<a name="L369"></a><tt class="py-lineno"> 369</tt>  <tt class="py-line">                    <tt class="py-string">'viewer2'</tt><tt class="py-op">,</tt> </tt>
<a name="L370"></a><tt class="py-lineno"> 370</tt>  <tt class="py-line">                    <tt class="py-string">'histogram'</tt><tt class="py-op">,</tt> </tt>
<a name="L371"></a><tt class="py-lineno"> 371</tt>  <tt class="py-line">                    <tt class="py-string">'splitNDcommon'</tt><tt class="py-op">,</tt> </tt>
<a name="L372"></a><tt class="py-lineno"> 372</tt>  <tt class="py-line">                    <tt class="py-string">'splitND'</tt><tt class="py-op">,</tt> </tt>
<a name="L373"></a><tt class="py-lineno"> 373</tt>  <tt class="py-line">                    <tt class="py-string">'splitND2'</tt><tt class="py-op">,</tt>  </tt>
<a name="L374"></a><tt class="py-lineno"> 374</tt>  <tt class="py-line">                    <tt class="py-string">'mockNDarray'</tt><tt class="py-op">,</tt> </tt>
<a name="L375"></a><tt class="py-lineno"> 375</tt>  <tt class="py-line">                    <tt class="py-op">]</tt> </tt>
<a name="L376"></a><tt class="py-lineno"> 376</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt class="py-name">m</tt> <tt class="py-keyword">in</tt> <tt class="py-name">mods</tt><tt class="py-op">:</tt> </tt>
<a name="L377"></a><tt class="py-lineno"> 377</tt>  <tt class="py-line">                <tt class="py-keyword">exec</tt> <tt class="py-string">"from . import %s; reload(%s)"</tt> <tt class="py-op">%</tt><tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">,</tt><tt class="py-name">m</tt><tt class="py-op">)</tt> </tt>
</div><a name="L378"></a><tt class="py-lineno"> 378</tt>  <tt class="py-line"> </tt>
<a name="localsAsOneObject"></a><div id="localsAsOneObject-def"><a name="L379"></a><tt class="py-lineno"> 379</tt> <a class="py-toggle" href="#" id="localsAsOneObject-toggle" onclick="return toggle('localsAsOneObject');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#localsAsOneObject">localsAsOneObject</a><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-param">args</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="localsAsOneObject-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="localsAsOneObject-expanded"><a name="L380"></a><tt class="py-lineno"> 380</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L381"></a><tt class="py-lineno"> 381</tt>  <tt class="py-line"><tt class="py-docstring">    useful for rapid code development / debugging:</tt> </tt>
<a name="L382"></a><tt class="py-lineno"> 382</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L383"></a><tt class="py-lineno"> 383</tt>  <tt class="py-line"><tt class="py-docstring">    create and return a classObject containing some/all local variables</tt> </tt>
<a name="L384"></a><tt class="py-lineno"> 384</tt>  <tt class="py-line"><tt class="py-docstring">    taken from the calling function-frame</tt> </tt>
<a name="L385"></a><tt class="py-lineno"> 385</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L386"></a><tt class="py-lineno"> 386</tt>  <tt class="py-line"><tt class="py-docstring">    if no args given: return all local vars</tt> </tt>
<a name="L387"></a><tt class="py-lineno"> 387</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L388"></a><tt class="py-lineno"> 388</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">sys</tt> </tt>
<a name="L389"></a><tt class="py-lineno"> 389</tt>  <tt class="py-line">    <tt class="py-name">fr</tt> <tt class="py-op">=</tt> <tt class="py-name">sys</tt><tt class="py-op">.</tt><tt class="py-name">_getframe</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L390"></a><tt class="py-lineno"> 390</tt>  <tt class="py-line"> </tt>
<a name="L391"></a><tt class="py-lineno"> 391</tt>  <tt class="py-line">    <tt class="py-keyword">class</tt> <tt class="py-def-name">_someLocalVars</tt><tt class="py-op">:</tt> </tt>
<a name="L392"></a><tt class="py-lineno"> 392</tt>  <tt class="py-line">        <tt class="py-keyword">pass</tt> </tt>
</div><a name="L393"></a><tt class="py-lineno"> 393</tt>  <tt class="py-line">     </tt>
<a name="L394"></a><tt class="py-lineno"> 394</tt>  <tt class="py-line">    <tt class="py-name">retDict</tt> <tt class="py-op">=</tt> <tt class="py-name">_someLocalVars</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L395"></a><tt class="py-lineno"> 395</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">args</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L396"></a><tt class="py-lineno"> 396</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">varname</tt><tt class="py-op">,</tt><tt class="py-name">varvalue</tt> <tt class="py-keyword">in</tt> <tt class="py-name">fr</tt><tt class="py-op">.</tt><tt class="py-name">f_locals</tt><tt class="py-op">.</tt><tt class="py-name">iteritems</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L397"></a><tt class="py-lineno"> 397</tt>  <tt class="py-line">            <tt class="py-name">retDict</tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt><tt class="py-op">[</tt><tt class="py-name">varname</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">varvalue</tt> </tt>
<a name="L398"></a><tt class="py-lineno"> 398</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L399"></a><tt class="py-lineno"> 399</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">v</tt> <tt class="py-keyword">in</tt> <tt class="py-name">args</tt><tt class="py-op">:</tt> </tt>
<a name="L400"></a><tt class="py-lineno"> 400</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt class="py-name">varname</tt><tt class="py-op">,</tt><tt class="py-name">varvalue</tt> <tt class="py-keyword">in</tt> <tt class="py-name">fr</tt><tt class="py-op">.</tt><tt class="py-name">f_locals</tt><tt class="py-op">.</tt><tt class="py-name">iteritems</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L401"></a><tt class="py-lineno"> 401</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">v</tt> <tt class="py-keyword">is</tt> <tt class="py-name">varvalue</tt><tt class="py-op">:</tt> </tt>
<a name="L402"></a><tt class="py-lineno"> 402</tt>  <tt class="py-line">                    <tt class="py-name">retDict</tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt><tt class="py-op">[</tt><tt class="py-name">varname</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">varvalue</tt> </tt>
<a name="L403"></a><tt class="py-lineno"> 403</tt>  <tt class="py-line">                    <tt class="py-keyword">break</tt> </tt>
<a name="L404"></a><tt class="py-lineno"> 404</tt>  <tt class="py-line"> </tt>
<a name="L405"></a><tt class="py-lineno"> 405</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">retDict</tt> </tt>
</div><a name="L406"></a><tt class="py-lineno"> 406</tt>  <tt class="py-line">                 </tt>
<a name="L407"></a><tt class="py-lineno"> 407</tt>  <tt class="py-line"> </tt>
<a name="L408"></a><tt class="py-lineno"> 408</tt>  <tt class="py-line"> </tt>
<a name="L409"></a><tt class="py-lineno"> 409</tt>  <tt class="py-line"> </tt>
<a name="L410"></a><tt class="py-lineno"> 410</tt>  <tt class="py-line"> </tt>
<a name="L411"></a><tt class="py-lineno"> 411</tt>  <tt class="py-line"><tt class="py-keyword">import</tt> <tt id="link-72" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-72', 'string', 'link-14');">string</a></tt> </tt>
<a name="L412"></a><tt class="py-lineno"> 412</tt>  <tt class="py-line"><tt class="py-comment"># http://aspn.activestate.com/ASPN/Cookbook/Python/Recipe/303342</tt> </tt>
<a name="strTranslate"></a><div id="strTranslate-def"><a name="L413"></a><tt class="py-lineno"> 413</tt> <a class="py-toggle" href="#" id="strTranslate-toggle" onclick="return toggle('strTranslate');">-</a><tt class="py-line"><tt class="py-comment"></tt><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#strTranslate">strTranslate</a><tt class="py-op">(</tt><tt class="py-param">s</tt><tt class="py-op">,</tt> <tt class="py-param">frm</tt><tt class="py-op">=</tt><tt class="py-string">''</tt><tt class="py-op">,</tt> <tt class="py-param">to</tt><tt class="py-op">=</tt><tt class="py-string">''</tt><tt class="py-op">,</tt> <tt class="py-param">delete</tt><tt class="py-op">=</tt><tt class="py-string">''</tt><tt class="py-op">,</tt> <tt class="py-param">keep</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="strTranslate-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="strTranslate-expanded"><a name="L414"></a><tt class="py-lineno"> 414</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L415"></a><tt class="py-lineno"> 415</tt>  <tt class="py-line"><tt class="py-docstring">    translate chars in string `s`</tt> </tt>
<a name="L416"></a><tt class="py-lineno"> 416</tt>  <tt class="py-line"><tt class="py-docstring">    each `c` in `frm` is translated into the respective `c` in `to`</tt> </tt>
<a name="L417"></a><tt class="py-lineno"> 417</tt>  <tt class="py-line"><tt class="py-docstring">      (`to` can be length 1)</tt> </tt>
<a name="L418"></a><tt class="py-lineno"> 418</tt>  <tt class="py-line"><tt class="py-docstring">    each `c` in `keep` is kept</tt> </tt>
<a name="L419"></a><tt class="py-lineno"> 419</tt>  <tt class="py-line"><tt class="py-docstring">     UNLESS(!) it is also in `delete`</tt> </tt>
<a name="L420"></a><tt class="py-lineno"> 420</tt>  <tt class="py-line"><tt class="py-docstring">    each `c` in `delete` is taken out</tt> </tt>
<a name="L421"></a><tt class="py-lineno"> 421</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L422"></a><tt class="py-lineno"> 422</tt>  <tt class="py-line"><tt class="py-docstring">    seb: instead of a class we have a function - ref. ASPN/Cookbook/Python/Recipe/303342</tt> </tt>
<a name="L423"></a><tt class="py-lineno"> 423</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L424"></a><tt class="py-lineno"> 424</tt>  <tt class="py-line"><tt class="py-docstring">    This class handles the three most common cases where I find myself having to stop and think about how to use translate:</tt> </tt>
<a name="L425"></a><tt class="py-lineno"> 425</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L426"></a><tt class="py-lineno"> 426</tt>  <tt class="py-line"><tt class="py-docstring">    1) Keeping only a given set of characters.</tt> </tt>
<a name="L427"></a><tt class="py-lineno"> 427</tt>  <tt class="py-line"><tt class="py-docstring">    &gt;&gt;&gt; strTranslate('Chris Perkins : 224-7992', keep=U.string.digits)</tt> </tt>
<a name="L428"></a><tt class="py-lineno"> 428</tt>  <tt class="py-line"><tt class="py-docstring">    '2247992'</tt> </tt>
<a name="L429"></a><tt class="py-lineno"> 429</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L430"></a><tt class="py-lineno"> 430</tt>  <tt class="py-line"><tt class="py-docstring">    2) Deleting a given set of characters.</tt> </tt>
<a name="L431"></a><tt class="py-lineno"> 431</tt>  <tt class="py-line"><tt class="py-docstring">    &gt;&gt;&gt; strTranslate('Chris Perkins : 224-7992', delete=U.string.digits)</tt> </tt>
<a name="L432"></a><tt class="py-lineno"> 432</tt>  <tt class="py-line"><tt class="py-docstring">    'Chris Perkins : -'</tt> </tt>
<a name="L433"></a><tt class="py-lineno"> 433</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L434"></a><tt class="py-lineno"> 434</tt>  <tt class="py-line"><tt class="py-docstring">    3) Replacing a set of characters with a single character.</tt> </tt>
<a name="L435"></a><tt class="py-lineno"> 435</tt>  <tt class="py-line"><tt class="py-docstring">    &gt;&gt;&gt; trans = Translator(string.digits, '%')</tt> </tt>
<a name="L436"></a><tt class="py-lineno"> 436</tt>  <tt class="py-line"><tt class="py-docstring">    &gt;&gt;&gt; strTranslate('Chris Perkins : 224-7992', (string.digits, '%')</tt> </tt>
<a name="L437"></a><tt class="py-lineno"> 437</tt>  <tt class="py-line"><tt class="py-docstring">    'Chris Perkins : %%%-%%%%'</tt> </tt>
<a name="L438"></a><tt class="py-lineno"> 438</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L439"></a><tt class="py-lineno"> 439</tt>  <tt class="py-line"><tt class="py-docstring">    Note that the delete parameter trumps the keep parameter if they overlap:</tt> </tt>
<a name="L440"></a><tt class="py-lineno"> 440</tt>  <tt class="py-line"><tt class="py-docstring">    &gt;&gt;&gt; strTranslate('abcdef', delete='abcd', keep='cdef')</tt> </tt>
<a name="L441"></a><tt class="py-lineno"> 441</tt>  <tt class="py-line"><tt class="py-docstring">    'ef'</tt> </tt>
<a name="L442"></a><tt class="py-lineno"> 442</tt>  <tt class="py-line"><tt class="py-docstring">    This is an arbitrary design choice - makes as much sense as anything, I suppose.</tt> </tt>
<a name="L443"></a><tt class="py-lineno"> 443</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L444"></a><tt class="py-lineno"> 444</tt>  <tt class="py-line">    <tt class="py-name">allchars</tt> <tt class="py-op">=</tt> <tt id="link-73" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-73', 'string', 'link-14');">string</a></tt><tt class="py-op">.</tt><tt class="py-name">maketrans</tt><tt class="py-op">(</tt><tt class="py-string">''</tt><tt class="py-op">,</tt><tt class="py-string">''</tt><tt class="py-op">)</tt> </tt>
<a name="L445"></a><tt class="py-lineno"> 445</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">to</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L446"></a><tt class="py-lineno"> 446</tt>  <tt class="py-line">        <tt class="py-name">to</tt> <tt class="py-op">=</tt> <tt class="py-name">to</tt> <tt class="py-op">*</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">frm</tt><tt class="py-op">)</tt> </tt>
<a name="L447"></a><tt class="py-lineno"> 447</tt>  <tt class="py-line">    <tt class="py-name">trans</tt> <tt class="py-op">=</tt> <tt id="link-74" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-74', 'string', 'link-14');">string</a></tt><tt class="py-op">.</tt><tt class="py-name">maketrans</tt><tt class="py-op">(</tt><tt class="py-name">frm</tt><tt class="py-op">,</tt> <tt class="py-name">to</tt><tt class="py-op">)</tt> </tt>
<a name="L448"></a><tt class="py-lineno"> 448</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">keep</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L449"></a><tt class="py-lineno"> 449</tt>  <tt class="py-line">        <tt class="py-name">delete</tt> <tt class="py-op">=</tt> <tt class="py-name">allchars</tt><tt class="py-op">.</tt><tt id="link-75" class="py-name" targets="Method Priithon.plt.plot_utility.box_object.translate()=Priithon.plt.plot_utility.box_object-class.html#translate"><a title="Priithon.plt.plot_utility.box_object.translate" class="py-name" href="#" onclick="return doclink('link-75', 'translate', 'link-75');">translate</a></tt><tt class="py-op">(</tt><tt class="py-name">allchars</tt><tt class="py-op">,</tt> <tt class="py-name">keep</tt><tt class="py-op">.</tt><tt id="link-76" class="py-name"><a title="Priithon.plt.plot_utility.box_object.translate" class="py-name" href="#" onclick="return doclink('link-76', 'translate', 'link-75');">translate</a></tt><tt class="py-op">(</tt><tt class="py-name">allchars</tt><tt class="py-op">,</tt> <tt class="py-name">delete</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L450"></a><tt class="py-lineno"> 450</tt>  <tt class="py-line">    <tt class="py-comment">#def callable(s):</tt> </tt>
<a name="L451"></a><tt class="py-lineno"> 451</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L452"></a><tt class="py-lineno"> 452</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">)</tt> <tt class="py-keyword">is</tt> <tt class="py-name">unicode</tt><tt class="py-op">:</tt> <tt class="py-comment"># HACK workaround for unicode (occurred with TextCrtl unicode-version of wxPython)</tt> </tt>
<a name="L453"></a><tt class="py-lineno"> 453</tt>  <tt class="py-line">        <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">str</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">)</tt> </tt>
<a name="L454"></a><tt class="py-lineno"> 454</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">s</tt><tt class="py-op">.</tt><tt id="link-77" class="py-name"><a title="Priithon.plt.plot_utility.box_object.translate" class="py-name" href="#" onclick="return doclink('link-77', 'translate', 'link-75');">translate</a></tt><tt class="py-op">(</tt><tt class="py-name">trans</tt><tt class="py-op">,</tt> <tt class="py-name">delete</tt><tt class="py-op">)</tt> </tt>
</div><a name="L455"></a><tt class="py-lineno"> 455</tt>  <tt class="py-line">    <tt class="py-comment">#return callable</tt> </tt>
<a name="L456"></a><tt class="py-lineno"> 456</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="exe"></a><div id="exe-def"><a name="L457"></a><tt class="py-lineno"> 457</tt> <a class="py-toggle" href="#" id="exe-toggle" onclick="return toggle('exe');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#exe">exe</a><tt class="py-op">(</tt><tt class="py-param">cmd</tt><tt class="py-op">,</tt> <tt class="py-param">special_cd</tt><tt class="py-op">=</tt><tt id="link-78" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-78', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="exe-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="exe-expanded"><a name="L458"></a><tt class="py-lineno"> 458</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L459"></a><tt class="py-lineno"> 459</tt>  <tt class="py-line"><tt class="py-docstring">    execute cmd in (Unix or Windows) shell</tt> </tt>
<a name="L460"></a><tt class="py-lineno"> 460</tt>  <tt class="py-line"><tt class="py-docstring">    raise OSError on error</tt> </tt>
<a name="L461"></a><tt class="py-lineno"> 461</tt>  <tt class="py-line"><tt class="py-docstring">    return stdout/stderr output lines as list of strings</tt> </tt>
<a name="L462"></a><tt class="py-lineno"> 462</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L463"></a><tt class="py-lineno"> 463</tt>  <tt class="py-line"><tt class="py-docstring">    if `special_cd` is True:</tt> </tt>
<a name="L464"></a><tt class="py-lineno"> 464</tt>  <tt class="py-line"><tt class="py-docstring">        if `cmd` starts with "cd "</tt> </tt>
<a name="L465"></a><tt class="py-lineno"> 465</tt>  <tt class="py-line"><tt class="py-docstring">          `os.chcwd` is called, i.e. to </tt> </tt>
<a name="L466"></a><tt class="py-lineno"> 466</tt>  <tt class="py-line"><tt class="py-docstring">          *really* change the current working directory</tt> </tt>
<a name="L467"></a><tt class="py-lineno"> 467</tt>  <tt class="py-line"><tt class="py-docstring">          (not just is (later disappearing)  sub-process)</tt> </tt>
<a name="L468"></a><tt class="py-lineno"> 468</tt>  <tt class="py-line"><tt class="py-docstring">        if `cmd` == "cd" (no further arguments)</tt> </tt>
<a name="L469"></a><tt class="py-lineno"> 469</tt>  <tt class="py-line"><tt class="py-docstring">          os.chdir(U.getHomeDir()) is called</tt> </tt>
<a name="L470"></a><tt class="py-lineno"> 470</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L471"></a><tt class="py-lineno"> 471</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">special_cd</tt><tt class="py-op">:</tt> </tt>
<a name="L472"></a><tt class="py-lineno"> 472</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">cmd</tt> <tt class="py-op">==</tt> <tt class="py-string">"cd"</tt><tt class="py-op">:</tt> </tt>
<a name="L473"></a><tt class="py-lineno"> 473</tt>  <tt class="py-line">            <tt class="py-keyword">import</tt> <tt class="py-name">os</tt> </tt>
<a name="L474"></a><tt class="py-lineno"> 474</tt>  <tt class="py-line">            <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">chdir</tt><tt class="py-op">(</tt><tt id="link-79" class="py-name"><a title="Priithon.useful.getHomeDir" class="py-name" href="#" onclick="return doclink('link-79', 'getHomeDir', 'link-27');">getHomeDir</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L475"></a><tt class="py-lineno"> 475</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> </tt>
<a name="L476"></a><tt class="py-lineno"> 476</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt class="py-name">cmd</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">3</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-string">"cd "</tt><tt class="py-op">:</tt> </tt>
<a name="L477"></a><tt class="py-lineno"> 477</tt>  <tt class="py-line">            <tt class="py-keyword">import</tt> <tt class="py-name">os</tt> </tt>
<a name="L478"></a><tt class="py-lineno"> 478</tt>  <tt class="py-line">            <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">chdir</tt><tt class="py-op">(</tt><tt class="py-name">cmd</tt><tt class="py-op">[</tt><tt class="py-number">3</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L479"></a><tt class="py-lineno"> 479</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> </tt>
<a name="L480"></a><tt class="py-lineno"> 480</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt id="link-80" class="py-name" targets="Function Priithon.usefulX.commands()=Priithon.usefulX-module.html#commands"><a title="Priithon.usefulX.commands" class="py-name" href="#" onclick="return doclink('link-80', 'commands', 'link-80');">commands</a></tt> </tt>
<a name="L481"></a><tt class="py-lineno"> 481</tt>  <tt class="py-line">    <tt class="py-name">stat</tt><tt class="py-op">,</tt> <tt class="py-name">ret</tt> <tt class="py-op">=</tt> <tt id="link-81" class="py-name"><a title="Priithon.usefulX.commands" class="py-name" href="#" onclick="return doclink('link-81', 'commands', 'link-80');">commands</a></tt><tt class="py-op">.</tt><tt class="py-name">getstatusoutput</tt><tt class="py-op">(</tt><tt class="py-name">cmd</tt><tt class="py-op">)</tt> </tt>
<a name="L482"></a><tt class="py-lineno"> 482</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">stat</tt><tt class="py-op">:</tt> </tt>
<a name="L483"></a><tt class="py-lineno"> 483</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">OSError</tt><tt class="py-op">(</tt><tt class="py-name">stat</tt><tt class="py-op">,</tt> <tt class="py-name">ret</tt><tt class="py-op">)</tt> </tt>
<a name="L484"></a><tt class="py-lineno"> 484</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L485"></a><tt class="py-lineno"> 485</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">ret</tt><tt class="py-op">.</tt><tt class="py-name">splitlines</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L486"></a><tt class="py-lineno"> 486</tt>  <tt class="py-line"> </tt>
<a name="L487"></a><tt class="py-lineno"> 487</tt>  <tt class="py-line"> </tt>
<a name="L488"></a><tt class="py-lineno"> 488</tt>  <tt class="py-line"> </tt>
<a name="L489"></a><tt class="py-lineno"> 489</tt>  <tt class="py-line"> </tt>
<a name="email"></a><div id="email-def"><a name="L490"></a><tt class="py-lineno"> 490</tt> <a class="py-toggle" href="#" id="email-toggle" onclick="return toggle('email');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#email">email</a><tt class="py-op">(</tt><tt class="py-param">message</tt><tt class="py-op">,</tt> <tt class="py-param">to</tt><tt class="py-op">,</tt> <tt class="py-param">subject</tt><tt class="py-op">=</tt><tt class="py-string">"email from Priithon"</tt><tt class="py-op">,</tt> <tt class="py-param">From</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt>  </tt>
<a name="L491"></a><tt class="py-lineno"> 491</tt>  <tt class="py-line">          <tt class="py-param">SMTP_USER</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">SMTP_PASSWORD</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">SMTP</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">SMTP_PORT</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="email-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="email-expanded"><a name="L492"></a><tt class="py-lineno"> 492</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L493"></a><tt class="py-lineno"> 493</tt>  <tt class="py-line"><tt class="py-docstring">    send an email message via SMTP server to recipient(s)</tt> </tt>
<a name="L494"></a><tt class="py-lineno"> 494</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L495"></a><tt class="py-lineno"> 495</tt>  <tt class="py-line"><tt class="py-docstring">    `to` can be a string or a list of strings</tt> </tt>
<a name="L496"></a><tt class="py-lineno"> 496</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L497"></a><tt class="py-lineno"> 497</tt>  <tt class="py-line"><tt class="py-docstring">    if `From` and `SMPT` are not given, values from </tt> </tt>
<a name="L498"></a><tt class="py-lineno"> 498</tt>  <tt class="py-line"><tt class="py-docstring">      PriConfig.email_From</tt> </tt>
<a name="L499"></a><tt class="py-lineno"> 499</tt>  <tt class="py-line"><tt class="py-docstring">    and</tt> </tt>
<a name="L500"></a><tt class="py-lineno"> 500</tt>  <tt class="py-line"><tt class="py-docstring">      PriConfig.email_SMTP, email_SMTP_PORT, email_SMTP_USER, email_SMTP_PASSWORD</tt> </tt>
<a name="L501"></a><tt class="py-lineno"> 501</tt>  <tt class="py-line"><tt class="py-docstring">    are used</tt> </tt>
<a name="L502"></a><tt class="py-lineno"> 502</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L503"></a><tt class="py-lineno"> 503</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-82" class="py-name"><a title="Priithon.PriConfig" class="py-name" href="#" onclick="return doclink('link-82', 'PriConfig', 'link-24');">PriConfig</a></tt> </tt>
<a name="L504"></a><tt class="py-lineno"> 504</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">smtplib</tt> </tt>
<a name="L505"></a><tt class="py-lineno"> 505</tt>  <tt class="py-line">    <tt class="py-name">body</tt> <tt class="py-op">=</tt> <tt class="py-name">message</tt> </tt>
<a name="L506"></a><tt class="py-lineno"> 506</tt>  <tt class="py-line"> </tt>
<a name="L507"></a><tt class="py-lineno"> 507</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">From</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L508"></a><tt class="py-lineno"> 508</tt>  <tt class="py-line">        <tt class="py-name">From</tt> <tt class="py-op">=</tt> <tt id="link-83" class="py-name"><a title="Priithon.PriConfig" class="py-name" href="#" onclick="return doclink('link-83', 'PriConfig', 'link-24');">PriConfig</a></tt><tt class="py-op">.</tt><tt id="link-84" class="py-name" targets="Variable Priithon.PriConfig.email_From=Priithon.PriConfig-module.html#email_From"><a title="Priithon.PriConfig.email_From" class="py-name" href="#" onclick="return doclink('link-84', 'email_From', 'link-84');">email_From</a></tt> </tt>
<a name="L509"></a><tt class="py-lineno"> 509</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">SMTP</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L510"></a><tt class="py-lineno"> 510</tt>  <tt class="py-line">        <tt class="py-name">SMTP</tt> <tt class="py-op">=</tt> <tt id="link-85" class="py-name"><a title="Priithon.PriConfig" class="py-name" href="#" onclick="return doclink('link-85', 'PriConfig', 'link-24');">PriConfig</a></tt><tt class="py-op">.</tt><tt id="link-86" class="py-name" targets="Variable Priithon.PriConfig.email_SMTP=Priithon.PriConfig-module.html#email_SMTP"><a title="Priithon.PriConfig.email_SMTP" class="py-name" href="#" onclick="return doclink('link-86', 'email_SMTP', 'link-86');">email_SMTP</a></tt> </tt>
<a name="L511"></a><tt class="py-lineno"> 511</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">SMTP_PORT</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L512"></a><tt class="py-lineno"> 512</tt>  <tt class="py-line">        <tt class="py-name">SMTP_PORT</tt> <tt class="py-op">=</tt> <tt id="link-87" class="py-name"><a title="Priithon.PriConfig" class="py-name" href="#" onclick="return doclink('link-87', 'PriConfig', 'link-24');">PriConfig</a></tt><tt class="py-op">.</tt><tt id="link-88" class="py-name" targets="Variable Priithon.PriConfig.email_SMTP_PORT=Priithon.PriConfig-module.html#email_SMTP_PORT"><a title="Priithon.PriConfig.email_SMTP_PORT" class="py-name" href="#" onclick="return doclink('link-88', 'email_SMTP_PORT', 'link-88');">email_SMTP_PORT</a></tt> </tt>
<a name="L513"></a><tt class="py-lineno"> 513</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">SMTP_USER</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L514"></a><tt class="py-lineno"> 514</tt>  <tt class="py-line">        <tt class="py-name">SMTP_USER</tt> <tt class="py-op">=</tt> <tt id="link-89" class="py-name"><a title="Priithon.PriConfig" class="py-name" href="#" onclick="return doclink('link-89', 'PriConfig', 'link-24');">PriConfig</a></tt><tt class="py-op">.</tt><tt id="link-90" class="py-name" targets="Variable Priithon.PriConfig.email_SMTP_USER=Priithon.PriConfig-module.html#email_SMTP_USER"><a title="Priithon.PriConfig.email_SMTP_USER" class="py-name" href="#" onclick="return doclink('link-90', 'email_SMTP_USER', 'link-90');">email_SMTP_USER</a></tt> </tt>
<a name="L515"></a><tt class="py-lineno"> 515</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">SMTP_PASSWORD</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L516"></a><tt class="py-lineno"> 516</tt>  <tt class="py-line">        <tt class="py-name">SMTP_PASSWORD</tt> <tt class="py-op">=</tt> <tt id="link-91" class="py-name"><a title="Priithon.PriConfig" class="py-name" href="#" onclick="return doclink('link-91', 'PriConfig', 'link-24');">PriConfig</a></tt><tt class="py-op">.</tt><tt id="link-92" class="py-name" targets="Variable Priithon.PriConfig.email_SMTP_PASSWORD=Priithon.PriConfig-module.html#email_SMTP_PASSWORD"><a title="Priithon.PriConfig.email_SMTP_PASSWORD" class="py-name" href="#" onclick="return doclink('link-92', 'email_SMTP_PASSWORD', 'link-92');">email_SMTP_PASSWORD</a></tt> </tt>
<a name="L517"></a><tt class="py-lineno"> 517</tt>  <tt class="py-line"> </tt>
<a name="L518"></a><tt class="py-lineno"> 518</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">SMTP</tt><tt class="py-op">:</tt> </tt>
<a name="L519"></a><tt class="py-lineno"> 519</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-string">"You have to specify the SMTP server, "</tt><tt class="py-op">+</tt> </tt>
<a name="L520"></a><tt class="py-lineno"> 520</tt>  <tt class="py-line">                           <tt class="py-string">"either by using the `SMTP` argument or by adjusting the `PriConfig.email_SMTP` preferences setting (in '.priithonrc.py')"</tt><tt class="py-op">)</tt> </tt>
<a name="L521"></a><tt class="py-lineno"> 521</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">isinstance</tt><tt class="py-op">(</tt><tt class="py-name">to</tt><tt class="py-op">,</tt> <tt class="py-name">basestring</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L522"></a><tt class="py-lineno"> 522</tt>  <tt class="py-line">        <tt class="py-name">to</tt> <tt class="py-op">=</tt> <tt class="py-string">", "</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">to</tt><tt class="py-op">)</tt> </tt>
<a name="L523"></a><tt class="py-lineno"> 523</tt>  <tt class="py-line"> </tt>
<a name="L524"></a><tt class="py-lineno"> 524</tt>  <tt class="py-line"> </tt>
<a name="L525"></a><tt class="py-lineno"> 525</tt>  <tt class="py-line">    <tt class="py-name">message</tt><tt class="py-op">=</tt><tt class="py-string">"""\</tt> </tt>
<a name="L526"></a><tt class="py-lineno"> 526</tt>  <tt class="py-line"><tt class="py-string">From: %(From)s</tt> </tt>
<a name="L527"></a><tt class="py-lineno"> 527</tt>  <tt class="py-line"><tt class="py-string">To: %(to)s</tt> </tt>
<a name="L528"></a><tt class="py-lineno"> 528</tt>  <tt class="py-line"><tt class="py-string">Subject: %(subject)s</tt> </tt>
<a name="L529"></a><tt class="py-lineno"> 529</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L530"></a><tt class="py-lineno"> 530</tt>  <tt class="py-line"><tt class="py-string">%(body)s</tt> </tt>
<a name="L531"></a><tt class="py-lineno"> 531</tt>  <tt class="py-line"><tt class="py-string">"""</tt> <tt class="py-op">%</tt> <tt class="py-name">locals</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L532"></a><tt class="py-lineno"> 532</tt>  <tt class="py-line"> </tt>
<a name="L533"></a><tt class="py-lineno"> 533</tt>  <tt class="py-line">    <tt class="py-name">server</tt> <tt class="py-op">=</tt> <tt class="py-name">smtplib</tt><tt class="py-op">.</tt><tt class="py-name">SMTP</tt><tt class="py-op">(</tt><tt class="py-name">SMTP</tt><tt class="py-op">,</tt> <tt class="py-name">SMTP_PORT</tt><tt class="py-op">)</tt> </tt>
<a name="L534"></a><tt class="py-lineno"> 534</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">SMTP_USER</tt><tt class="py-op">:</tt> <tt class="py-comment"># try to login - e.g. gmail</tt> </tt>
<a name="L535"></a><tt class="py-lineno"> 535</tt>  <tt class="py-line">        <tt class="py-name">server</tt><tt class="py-op">.</tt><tt class="py-name">ehlo</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L536"></a><tt class="py-lineno"> 536</tt>  <tt class="py-line">        <tt class="py-name">server</tt><tt class="py-op">.</tt><tt class="py-name">starttls</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L537"></a><tt class="py-lineno"> 537</tt>  <tt class="py-line">        <tt class="py-name">server</tt><tt class="py-op">.</tt><tt class="py-name">ehlo</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L538"></a><tt class="py-lineno"> 538</tt>  <tt class="py-line">        <tt class="py-name">server</tt><tt class="py-op">.</tt><tt class="py-name">login</tt><tt class="py-op">(</tt><tt class="py-name">SMTP_USER</tt><tt class="py-op">,</tt> <tt class="py-name">SMTP_PASSWORD</tt><tt class="py-op">)</tt> </tt>
<a name="L539"></a><tt class="py-lineno"> 539</tt>  <tt class="py-line"> </tt>
<a name="L540"></a><tt class="py-lineno"> 540</tt>  <tt class="py-line">    <tt class="py-name">server</tt><tt class="py-op">.</tt><tt class="py-name">sendmail</tt><tt class="py-op">(</tt><tt class="py-name">From</tt><tt class="py-op">,</tt> <tt class="py-name">to</tt><tt class="py-op">,</tt> <tt class="py-name">message</tt><tt class="py-op">)</tt> </tt>
<a name="L541"></a><tt class="py-lineno"> 541</tt>  <tt class="py-line">    <tt class="py-name">server</tt><tt class="py-op">.</tt><tt id="link-93" class="py-name" targets="Method Priithon.py.shell.Shell.quit()=Priithon.py.shell.Shell-class.html#quit"><a title="Priithon.py.shell.Shell.quit" class="py-name" href="#" onclick="return doclink('link-93', 'quit', 'link-93');">quit</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L542"></a><tt class="py-lineno"> 542</tt>  <tt class="py-line"> </tt>
<a name="memNAprofile"></a><div id="memNAprofile-def"><a name="L543"></a><tt class="py-lineno"> 543</tt> <a class="py-toggle" href="#" id="memNAprofile-toggle" onclick="return toggle('memNAprofile');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#memNAprofile">memNAprofile</a><tt class="py-op">(</tt><tt class="py-param">dicts</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> </tt>
<a name="L544"></a><tt class="py-lineno"> 544</tt>  <tt class="py-line">                 <tt class="py-param">addHere</tt><tt class="py-op">=</tt><tt class="py-number">3</tt><tt class="py-op">,</tt> </tt>
<a name="L545"></a><tt class="py-lineno"> 545</tt>  <tt class="py-line">                 <tt class="py-param">verbose</tt><tt class="py-op">=</tt><tt id="link-94" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-94', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="memNAprofile-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="memNAprofile-expanded"><a name="L546"></a><tt class="py-lineno"> 546</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L547"></a><tt class="py-lineno"> 547</tt>  <tt class="py-line"><tt class="py-docstring">    report on numarray mem usage in given dictinoaries (or modules)</tt> </tt>
<a name="L548"></a><tt class="py-lineno"> 548</tt>  <tt class="py-line"><tt class="py-docstring">    if addHere is</tt> </tt>
<a name="L549"></a><tt class="py-lineno"> 549</tt>  <tt class="py-line"><tt class="py-docstring">       1 include locals() dict from where memNAprofile is called</tt> </tt>
<a name="L550"></a><tt class="py-lineno"> 550</tt>  <tt class="py-line"><tt class="py-docstring">       2 include globals() dict from where memNAprofile is called</tt> </tt>
<a name="L551"></a><tt class="py-lineno"> 551</tt>  <tt class="py-line"><tt class="py-docstring">       3 both</tt> </tt>
<a name="L552"></a><tt class="py-lineno"> 552</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L553"></a><tt class="py-lineno"> 553</tt>  <tt class="py-line"><tt class="py-docstring">    if verbose: print stats for each numarray found</tt> </tt>
<a name="L554"></a><tt class="py-lineno"> 554</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L555"></a><tt class="py-lineno"> 555</tt>  <tt class="py-line"><tt class="py-docstring">    returns tuple( number of numarrays, total MB mem usage, timeString)</tt> </tt>
<a name="L556"></a><tt class="py-lineno"> 556</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L557"></a><tt class="py-lineno"> 557</tt>  <tt class="py-line">    <tt class="py-keyword">print</tt> <tt class="py-string">"TODO: memNAprofile"</tt> </tt>
<a name="L558"></a><tt class="py-lineno"> 558</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt>  </tt>
<a name="L559"></a><tt class="py-lineno"> 559</tt>  <tt class="py-line">    <tt class="py-keyword">global</tt> <tt class="py-name">arrs</tt> <tt class="py-comment"># HACK for sebsort</tt> </tt>
<a name="L560"></a><tt class="py-lineno"> 560</tt>  <tt class="py-line">    <tt class="py-name">gs</tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt> </tt>
<a name="L561"></a><tt class="py-lineno"> 561</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">addHere</tt><tt class="py-op">:</tt> </tt>
<a name="L562"></a><tt class="py-lineno"> 562</tt>  <tt class="py-line">        <tt class="py-keyword">import</tt> <tt class="py-name">sys</tt> </tt>
<a name="L563"></a><tt class="py-lineno"> 563</tt>  <tt class="py-line">        <tt class="py-name">fr</tt> <tt class="py-op">=</tt> <tt class="py-name">sys</tt><tt class="py-op">.</tt><tt class="py-name">_getframe</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L564"></a><tt class="py-lineno"> 564</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">addHere</tt> <tt class="py-op">&amp;</tt> <tt class="py-number">2</tt><tt class="py-op">:</tt> </tt>
<a name="L565"></a><tt class="py-lineno"> 565</tt>  <tt class="py-line">            <tt class="py-name">gs</tt><tt class="py-op">.</tt><tt id="link-95" class="py-name" targets="Method Priithon.plt.wxplt.plot_canvas.update()=Priithon.plt.wxplt.plot_canvas-class.html#update,Method Priithon.plt.wxplt.plot_frame.update()=Priithon.plt.wxplt.plot_frame-class.html#update"><a title="Priithon.plt.wxplt.plot_canvas.update
Priithon.plt.wxplt.plot_frame.update" class="py-name" href="#" onclick="return doclink('link-95', 'update', 'link-95');">update</a></tt><tt class="py-op">(</tt><tt class="py-name">fr</tt><tt class="py-op">.</tt><tt class="py-name">f_globals</tt><tt class="py-op">)</tt> </tt>
<a name="L566"></a><tt class="py-lineno"> 566</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">addHere</tt> <tt class="py-op">&amp;</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L567"></a><tt class="py-lineno"> 567</tt>  <tt class="py-line">            <tt class="py-name">gs</tt><tt class="py-op">.</tt><tt id="link-96" class="py-name"><a title="Priithon.plt.wxplt.plot_canvas.update
Priithon.plt.wxplt.plot_frame.update" class="py-name" href="#" onclick="return doclink('link-96', 'update', 'link-95');">update</a></tt><tt class="py-op">(</tt><tt class="py-name">fr</tt><tt class="py-op">.</tt><tt class="py-name">f_locals</tt><tt class="py-op">)</tt> </tt>
<a name="L568"></a><tt class="py-lineno"> 568</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">d</tt> <tt class="py-keyword">in</tt> <tt class="py-name">dicts</tt><tt class="py-op">:</tt> </tt>
<a name="L569"></a><tt class="py-lineno"> 569</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">d</tt><tt class="py-op">)</tt> <tt class="py-keyword">is</tt> <tt class="py-name">dict</tt><tt class="py-op">:</tt> </tt>
<a name="L570"></a><tt class="py-lineno"> 570</tt>  <tt class="py-line">            <tt class="py-name">gs</tt><tt class="py-op">.</tt><tt id="link-97" class="py-name"><a title="Priithon.plt.wxplt.plot_canvas.update
Priithon.plt.wxplt.plot_frame.update" class="py-name" href="#" onclick="return doclink('link-97', 'update', 'link-95');">update</a></tt><tt class="py-op">(</tt> <tt class="py-name">d</tt> <tt class="py-op">)</tt> </tt>
<a name="L571"></a><tt class="py-lineno"> 571</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> <tt class="py-comment"># assume it is a module</tt> </tt>
<a name="L572"></a><tt class="py-lineno"> 572</tt>  <tt class="py-line">            <tt class="py-name">gs</tt><tt class="py-op">.</tt><tt id="link-98" class="py-name"><a title="Priithon.plt.wxplt.plot_canvas.update
Priithon.plt.wxplt.plot_frame.update" class="py-name" href="#" onclick="return doclink('link-98', 'update', 'link-95');">update</a></tt><tt class="py-op">(</tt> <tt class="py-name">d</tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt> <tt class="py-op">)</tt> </tt>
<a name="L573"></a><tt class="py-lineno"> 573</tt>  <tt class="py-line">         </tt>
<a name="L574"></a><tt class="py-lineno"> 574</tt>  <tt class="py-line"> </tt>
<a name="L575"></a><tt class="py-lineno"> 575</tt>  <tt class="py-line">    <tt class="py-comment">#global gs, k, o,f,fs, arrs, totsize, totnum</tt> </tt>
<a name="L576"></a><tt class="py-lineno"> 576</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">f</tt><tt class="py-op">=</tt><tt class="py-string">''</tt>   <tt class="py-comment"># RuntimeError: dictionary changed size during iteration</tt> </tt>
<a name="L577"></a><tt class="py-lineno"> 577</tt>  <tt class="py-line">    <tt class="py-name">fs</tt><tt class="py-op">=</tt><tt class="py-string">''</tt> </tt>
<a name="L578"></a><tt class="py-lineno"> 578</tt>  <tt class="py-line">    <tt class="py-name">o</tt><tt class="py-op">=</tt><tt class="py-string">''</tt> </tt>
<a name="L579"></a><tt class="py-lineno"> 579</tt>  <tt class="py-line">    <tt id="link-99" class="py-name" targets="Variable Priithon.py.introspect.k=Priithon.py.introspect-module.html#k"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-99', 'k', 'link-99');">k</a></tt><tt class="py-op">=</tt><tt class="py-string">''</tt> </tt>
<a name="L580"></a><tt class="py-lineno"> 580</tt>  <tt class="py-line">    <tt class="py-name">arrs</tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt> </tt>
<a name="L581"></a><tt class="py-lineno"> 581</tt>  <tt class="py-line">    <tt class="py-name">totsize</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L582"></a><tt class="py-lineno"> 582</tt>  <tt class="py-line">    <tt class="py-name">totnum</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L583"></a><tt class="py-lineno"> 583</tt>  <tt class="py-line">    <tt class="py-name">kStringMaxLen</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L584"></a><tt class="py-lineno"> 584</tt>  <tt class="py-line">    <tt class="py-name">t_naa</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ndarray</tt> </tt>
<a name="L585"></a><tt class="py-lineno"> 585</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt id="link-100" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-100', 'string', 'link-14');">string</a></tt> </tt>
<a name="L586"></a><tt class="py-lineno"> 586</tt>  <tt class="py-line"> </tt>
<a name="L587"></a><tt class="py-lineno"> 587</tt>  <tt class="py-line">    <tt class="py-name">nonMemFakeAddr</tt> <tt class="py-op">=</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt> </tt>
<a name="L588"></a><tt class="py-lineno"> 588</tt>  <tt class="py-line"> </tt>
<a name="L589"></a><tt class="py-lineno"> 589</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-101" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-101', 'k', 'link-99');">k</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">gs</tt><tt class="py-op">:</tt> </tt>
<a name="L590"></a><tt class="py-lineno"> 590</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-102" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-102', 'k', 'link-99');">k</a></tt><tt class="py-op">)</tt> <tt class="py-op">&gt;</tt> <tt class="py-name">kStringMaxLen</tt><tt class="py-op">:</tt> </tt>
<a name="L591"></a><tt class="py-lineno"> 591</tt>  <tt class="py-line">            <tt class="py-name">kStringMaxLen</tt> <tt class="py-op">=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-103" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-103', 'k', 'link-99');">k</a></tt><tt class="py-op">)</tt> </tt>
<a name="L592"></a><tt class="py-lineno"> 592</tt>  <tt class="py-line">        <tt class="py-name">o</tt> <tt class="py-op">=</tt> <tt class="py-name">gs</tt><tt class="py-op">[</tt><tt id="link-104" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-104', 'k', 'link-99');">k</a></tt><tt class="py-op">]</tt> </tt>
<a name="L593"></a><tt class="py-lineno"> 593</tt>  <tt class="py-line">        <tt class="py-name">t</tt> <tt class="py-op">=</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">o</tt><tt class="py-op">)</tt> </tt>
<a name="L594"></a><tt class="py-lineno"> 594</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">t</tt> <tt class="py-op">==</tt> <tt class="py-name">t_naa</tt><tt class="py-op">:</tt> </tt>
<a name="L595"></a><tt class="py-lineno"> 595</tt>  <tt class="py-line">            <tt class="py-comment">#print k # , t</tt> </tt>
<a name="L596"></a><tt class="py-lineno"> 596</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-name">f</tt> <tt class="py-op">=</tt> <tt id="link-105" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-105', 'string', 'link-14');">string</a></tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt> <tt class="py-name">repr</tt><tt class="py-op">(</tt><tt class="py-name">o</tt><tt class="py-op">.</tt><tt class="py-name">_data</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L597"></a><tt class="py-lineno"> 597</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-string">'&lt;memory'</tt><tt class="py-op">:</tt> <tt class="py-comment"># '&lt;memory at 0x50a66008 with size:0x006f5400 held by object 0x092772e8 aliasing object 0x00000000&gt;'</tt> </tt>
<a name="L598"></a><tt class="py-lineno"> 598</tt>  <tt class="py-line">                <tt class="py-name">fs</tt> <tt class="py-op">=</tt> <tt id="link-106" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-106', 'string', 'link-14');">string</a></tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt> <tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-number">4</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-string">':'</tt> <tt class="py-op">)</tt> </tt>
<a name="L599"></a><tt class="py-lineno"> 599</tt>  <tt class="py-line">                <tt id="link-107" class="py-name" targets="Method Priithon.plt.plot_objects.text_object.size()=Priithon.plt.plot_objects.text_object-class.html#size,Method Priithon.plt.plot_utility.box_object.size()=Priithon.plt.plot_utility.box_object-class.html#size,Variable Priithon.viewerRubberbandMode.viewerRubberbandMode.size=Priithon.viewerRubberbandMode.viewerRubberbandMode-class.html#size"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-107', 'size', 'link-107');">size</a></tt>   <tt class="py-op">=</tt> <tt class="py-name">eval</tt><tt class="py-op">(</tt> <tt class="py-name">fs</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt> </tt>
<a name="L600"></a><tt class="py-lineno"> 600</tt>  <tt class="py-line">                <tt class="py-name">memAt</tt>  <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt> </tt>
<a name="L601"></a><tt class="py-lineno"> 601</tt>  <tt class="py-line">                <tt class="py-name">objNum</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-number">8</tt><tt class="py-op">]</tt> </tt>
<a name="L602"></a><tt class="py-lineno"> 602</tt>  <tt class="py-line">            <tt class="py-keyword">elif</tt> <tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-string">'&lt;MemmapSlice'</tt><tt class="py-op">:</tt> <tt class="py-comment"># '&lt;MemmapSlice of length:7290000 readonly&gt;'</tt> </tt>
<a name="L603"></a><tt class="py-lineno"> 603</tt>  <tt class="py-line">                <tt class="py-name">fs</tt> <tt class="py-op">=</tt> <tt id="link-108" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-108', 'string', 'link-14');">string</a></tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt> <tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-string">':'</tt> <tt class="py-op">)</tt> </tt>
<a name="L604"></a><tt class="py-lineno"> 604</tt>  <tt class="py-line">                <tt id="link-109" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-109', 'size', 'link-107');">size</a></tt>   <tt class="py-op">=</tt> <tt class="py-name">eval</tt><tt class="py-op">(</tt> <tt class="py-name">fs</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt> </tt>
<a name="L605"></a><tt class="py-lineno"> 605</tt>  <tt class="py-line">                <tt class="py-name">memAt</tt>  <tt class="py-op">=</tt> <tt class="py-name">nonMemFakeAddr</tt> </tt>
<a name="L606"></a><tt class="py-lineno"> 606</tt>  <tt class="py-line">                <tt class="py-name">nonMemFakeAddr</tt> <tt class="py-op">-=</tt> <tt class="py-number">1</tt> </tt>
<a name="L607"></a><tt class="py-lineno"> 607</tt>  <tt class="py-line">                <tt class="py-name">objNum</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L608"></a><tt class="py-lineno"> 608</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L609"></a><tt class="py-lineno"> 609</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">verbose</tt><tt class="py-op">:</tt> </tt>
<a name="L610"></a><tt class="py-lineno"> 610</tt>  <tt class="py-line">                    <tt class="py-keyword">print</tt> <tt class="py-string">"# DON'T KNOW: "</tt><tt class="py-op">,</tt>  <tt id="link-110" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-110', 'k', 'link-99');">k</a></tt><tt class="py-op">,</tt> <tt class="py-name">repr</tt><tt class="py-op">(</tt><tt class="py-name">o</tt><tt class="py-op">.</tt><tt class="py-name">_data</tt><tt class="py-op">)</tt> </tt>
<a name="L611"></a><tt class="py-lineno"> 611</tt>  <tt class="py-line">                <tt class="py-keyword">continue</tt> </tt>
<a name="L612"></a><tt class="py-lineno"> 612</tt>  <tt class="py-line"> </tt>
<a name="L613"></a><tt class="py-lineno"> 613</tt>  <tt class="py-line">            <tt class="py-comment">#print repr(o._data)</tt> </tt>
<a name="L614"></a><tt class="py-lineno"> 614</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment">#print objNum, memAt, size</tt> </tt>
<a name="L615"></a><tt class="py-lineno"> 615</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L616"></a><tt class="py-lineno"> 616</tt>  <tt class="py-line">            <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L617"></a><tt class="py-lineno"> 617</tt>  <tt class="py-line">                <tt class="py-name">arrs</tt><tt class="py-op">[</tt> <tt class="py-name">memAt</tt> <tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">+=</tt> <tt class="py-number">1</tt> </tt>
<a name="L618"></a><tt class="py-lineno"> 618</tt>  <tt class="py-line">                <tt class="py-name">arrs</tt><tt class="py-op">[</tt> <tt class="py-name">memAt</tt> <tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt> <tt id="link-111" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-111', 'k', 'link-99');">k</a></tt> <tt class="py-op">)</tt> </tt>
<a name="L619"></a><tt class="py-lineno"> 619</tt>  <tt class="py-line">                <tt class="py-name">arrs</tt><tt class="py-op">[</tt> <tt class="py-name">memAt</tt> <tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt> <tt id="link-112" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-112', 'size', 'link-107');">size</a></tt> <tt class="py-op">)</tt> </tt>
<a name="L620"></a><tt class="py-lineno"> 620</tt>  <tt class="py-line">            <tt class="py-keyword">except</tt><tt class="py-op">:</tt> </tt>
<a name="L621"></a><tt class="py-lineno"> 621</tt>  <tt class="py-line">                <tt class="py-name">arrs</tt><tt class="py-op">[</tt> <tt class="py-name">memAt</tt> <tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt> <tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-op">[</tt><tt id="link-113" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-113', 'k', 'link-99');">k</a></tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">[</tt><tt id="link-114" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-114', 'size', 'link-107');">size</a></tt><tt class="py-op">]</tt> <tt class="py-op">]</tt> </tt>
<a name="L622"></a><tt class="py-lineno"> 622</tt>  <tt class="py-line">                <tt class="py-name">totsize</tt> <tt class="py-op">+=</tt> <tt id="link-115" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-115', 'size', 'link-107');">size</a></tt> </tt>
<a name="L623"></a><tt class="py-lineno"> 623</tt>  <tt class="py-line">                <tt class="py-name">totnum</tt>  <tt class="py-op">+=</tt> <tt class="py-number">1</tt> </tt>
<a name="L624"></a><tt class="py-lineno"> 624</tt>  <tt class="py-line">                 </tt>
<a name="L625"></a><tt class="py-lineno"> 625</tt>  <tt class="py-line">    <tt class="py-keyword">def</tt> <tt class="py-def-name">sebsort</tt><tt class="py-op">(</tt><tt class="py-param">m1</tt><tt class="py-op">,</tt><tt class="py-param">m2</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L626"></a><tt class="py-lineno"> 626</tt>  <tt class="py-line">        <tt class="py-keyword">global</tt> <tt class="py-name">arrs</tt> </tt>
<a name="L627"></a><tt class="py-lineno"> 627</tt>  <tt class="py-line">        <tt class="py-keyword">import</tt> <tt class="py-name">__builtin__</tt> </tt>
<a name="L628"></a><tt class="py-lineno"> 628</tt>  <tt class="py-line">        <tt class="py-name">k1</tt> <tt class="py-op">=</tt> <tt class="py-name">arrs</tt><tt class="py-op">[</tt> <tt class="py-name">m1</tt> <tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L629"></a><tt class="py-lineno"> 629</tt>  <tt class="py-line">        <tt class="py-name">k2</tt> <tt class="py-op">=</tt> <tt class="py-name">arrs</tt><tt class="py-op">[</tt> <tt class="py-name">m2</tt> <tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L630"></a><tt class="py-lineno"> 630</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">__builtin__</tt><tt class="py-op">.</tt><tt class="py-name">cmp</tt><tt class="py-op">(</tt><tt class="py-name">k1</tt><tt class="py-op">,</tt>  <tt class="py-name">k2</tt><tt class="py-op">)</tt> </tt>
</div><a name="L631"></a><tt class="py-lineno"> 631</tt>  <tt class="py-line"> </tt>
<a name="L632"></a><tt class="py-lineno"> 632</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">verbose</tt><tt class="py-op">:</tt> </tt>
<a name="L633"></a><tt class="py-lineno"> 633</tt>  <tt class="py-line">        <tt class="py-name">ms</tt> <tt class="py-op">=</tt> <tt class="py-name">arrs</tt><tt class="py-op">.</tt><tt id="link-116" class="py-name" targets="Method Priithon.plt.dumbdbm_patched._Database.keys()=Priithon.plt.dumbdbm_patched._Database-class.html#keys"><a title="Priithon.plt.dumbdbm_patched._Database.keys" class="py-name" href="#" onclick="return doclink('link-116', 'keys', 'link-116');">keys</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L634"></a><tt class="py-lineno"> 634</tt>  <tt class="py-line">        <tt class="py-name">ms</tt><tt class="py-op">.</tt><tt class="py-name">sort</tt><tt class="py-op">(</tt> <tt class="py-name">sebsort</tt> <tt class="py-op">)</tt> </tt>
<a name="L635"></a><tt class="py-lineno"> 635</tt>  <tt class="py-line">        <tt class="py-comment">#print kStringMaxLen</tt> </tt>
<a name="L636"></a><tt class="py-lineno"> 636</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-keyword">for</tt> <tt class="py-name">memAt</tt> <tt class="py-keyword">in</tt> <tt class="py-name">ms</tt><tt class="py-op">:</tt> </tt>
<a name="L637"></a><tt class="py-lineno"> 637</tt>  <tt class="py-line">            <tt class="py-name">ks</tt>   <tt class="py-op">=</tt> <tt class="py-name">arrs</tt><tt class="py-op">[</tt> <tt class="py-name">memAt</tt> <tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L638"></a><tt class="py-lineno"> 638</tt>  <tt class="py-line">            <tt id="link-117" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-117', 'size', 'link-107');">size</a></tt> <tt class="py-op">=</tt> <tt class="py-name">arrs</tt><tt class="py-op">[</tt> <tt class="py-name">memAt</tt> <tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L639"></a><tt class="py-lineno"> 639</tt>  <tt class="py-line">            <tt class="py-name">o</tt> <tt class="py-op">=</tt> <tt class="py-name">gs</tt><tt class="py-op">[</tt> <tt class="py-name">ks</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">]</tt> </tt>
<a name="L640"></a><tt class="py-lineno"> 640</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">ks</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L641"></a><tt class="py-lineno"> 641</tt>  <tt class="py-line">                <tt class="py-name">ks</tt> <tt class="py-op">=</tt> <tt class="py-name">ks</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L642"></a><tt class="py-lineno"> 642</tt>  <tt class="py-line">            <tt class="py-keyword">print</tt> <tt class="py-string">"%8.2fk %-*s %-14s %-15s %-10s"</tt> <tt class="py-op">%</tt><tt class="py-op">(</tt><tt id="link-118" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-118', 'size', 'link-107');">size</a></tt><tt class="py-op">/</tt><tt class="py-number">1024.</tt><tt class="py-op">,</tt> <tt class="py-name">kStringMaxLen</tt><tt class="py-op">,</tt> <tt class="py-name">ks</tt><tt class="py-op">,</tt> <tt class="py-name">o</tt><tt class="py-op">.</tt><tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">o</tt><tt class="py-op">.</tt><tt id="link-119" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-119', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt> <tt class="py-name">memAt</tt><tt class="py-op">)</tt> </tt>
<a name="L643"></a><tt class="py-lineno"> 643</tt>  <tt class="py-line"> </tt>
<a name="L644"></a><tt class="py-lineno"> 644</tt>  <tt class="py-line">    <tt class="py-keyword">del</tt> <tt class="py-name">arrs</tt> <tt class="py-comment"># HACK for sebsort</tt> </tt>
<a name="L645"></a><tt class="py-lineno"> 645</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">time</tt> </tt>
<a name="L646"></a><tt class="py-lineno"> 646</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">totnum</tt><tt class="py-op">,</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">totsize</tt><tt class="py-op">/</tt><tt class="py-number">1024.</tt><tt class="py-op">/</tt><tt class="py-number">1024.</tt> <tt class="py-op">*</tt> <tt class="py-number">1000</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-number">1000.</tt><tt class="py-op">,</tt>  <tt class="py-name">time</tt><tt class="py-op">.</tt><tt class="py-name">asctime</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L647"></a><tt class="py-lineno"> 647</tt>  <tt class="py-line"> </tt>
<a name="dirNA"></a><div id="dirNA-def"><a name="L648"></a><tt class="py-lineno"> 648</tt> <a class="py-toggle" href="#" id="dirNA-toggle" onclick="return toggle('dirNA');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#dirNA">dirNA</a><tt class="py-op">(</tt><tt class="py-param">inclSize</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="dirNA-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="dirNA-expanded"><a name="L649"></a><tt class="py-lineno"> 649</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">sys</tt><tt class="py-op">,</tt> <tt class="py-name">time</tt> </tt>
<a name="L650"></a><tt class="py-lineno"> 650</tt>  <tt class="py-line">    <tt class="py-keyword">global</tt> <tt class="py-name">fr</tt><tt class="py-op">,</tt><tt class="py-name">fc</tt><tt class="py-op">,</tt> <tt class="py-name">argsn</tt><tt class="py-op">,</tt> <tt class="py-name">args</tt> </tt>
<a name="L651"></a><tt class="py-lineno"> 651</tt>  <tt class="py-line">    <tt class="py-name">fr</tt> <tt class="py-op">=</tt> <tt class="py-name">sys</tt><tt class="py-op">.</tt><tt class="py-name">_getframe</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L652"></a><tt class="py-lineno"> 652</tt>  <tt class="py-line">    <tt class="py-name">fc</tt> <tt class="py-op">=</tt> <tt class="py-name">fr</tt><tt class="py-op">.</tt><tt class="py-name">f_code</tt> </tt>
<a name="L653"></a><tt class="py-lineno"> 653</tt>  <tt class="py-line">         </tt>
<a name="L654"></a><tt class="py-lineno"> 654</tt>  <tt class="py-line">    <tt class="py-keyword">print</tt> <tt class="py-string">"TODO: dirNA"</tt> </tt>
<a name="L655"></a><tt class="py-lineno"> 655</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt>  </tt>
<a name="L656"></a><tt class="py-lineno"> 656</tt>  <tt class="py-line">    <tt class="py-comment">#           modname = fr.f_globals['__name__']</tt> </tt>
<a name="L657"></a><tt class="py-lineno"> 657</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#    #print "=== Module:", modname, "==="</tt> </tt>
<a name="L658"></a><tt class="py-lineno"> 658</tt>  <tt class="py-line"><tt class="py-comment"></tt>     </tt>
<a name="L659"></a><tt class="py-lineno"> 659</tt>  <tt class="py-line">    <tt class="py-comment">#           if modname != None:</tt> </tt>
<a name="L660"></a><tt class="py-lineno"> 660</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#               exec "import " + modname</tt> </tt>
<a name="L661"></a><tt class="py-lineno"> 661</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#           else:</tt> </tt>
<a name="L662"></a><tt class="py-lineno"> 662</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#               print "DEBUG: modname is None  -- why !?"</tt> </tt>
<a name="L663"></a><tt class="py-lineno"> 663</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L664"></a><tt class="py-lineno"> 664</tt>  <tt class="py-line">    <tt class="py-keyword">global</tt> <tt class="py-name">gs</tt><tt class="py-op">,</tt> <tt id="link-120" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-120', 'k', 'link-99');">k</a></tt><tt class="py-op">,</tt> <tt class="py-name">o</tt><tt class="py-op">,</tt><tt class="py-name">f</tt><tt class="py-op">,</tt><tt class="py-name">fs</tt><tt class="py-op">,</tt> <tt class="py-name">arrs</tt><tt class="py-op">,</tt> <tt class="py-name">totsize</tt><tt class="py-op">,</tt> <tt class="py-name">totnum</tt> </tt>
<a name="L665"></a><tt class="py-lineno"> 665</tt>  <tt class="py-line">    <tt class="py-name">f</tt><tt class="py-op">=</tt><tt class="py-string">''</tt>   <tt class="py-comment"># RuntimeError: dictionary changed size during iteration</tt> </tt>
<a name="L666"></a><tt class="py-lineno"> 666</tt>  <tt class="py-line">    <tt class="py-name">fs</tt><tt class="py-op">=</tt><tt class="py-string">''</tt> </tt>
<a name="L667"></a><tt class="py-lineno"> 667</tt>  <tt class="py-line">    <tt class="py-name">o</tt><tt class="py-op">=</tt><tt class="py-string">''</tt> </tt>
<a name="L668"></a><tt class="py-lineno"> 668</tt>  <tt class="py-line">    <tt id="link-121" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-121', 'k', 'link-99');">k</a></tt><tt class="py-op">=</tt><tt class="py-string">''</tt> </tt>
<a name="L669"></a><tt class="py-lineno"> 669</tt>  <tt class="py-line">    <tt class="py-name">arrs</tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt> </tt>
<a name="L670"></a><tt class="py-lineno"> 670</tt>  <tt class="py-line">    <tt class="py-name">totsize</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L671"></a><tt class="py-lineno"> 671</tt>  <tt class="py-line">    <tt class="py-name">totnum</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L672"></a><tt class="py-lineno"> 672</tt>  <tt class="py-line">    <tt class="py-comment">#gs = fr.f_globals # .keys()</tt> </tt>
<a name="L673"></a><tt class="py-lineno"> 673</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">gs</tt> <tt class="py-op">=</tt> <tt class="py-name">fr</tt><tt class="py-op">.</tt><tt class="py-name">f_locals</tt> <tt class="py-comment"># .keys()</tt> </tt>
<a name="L674"></a><tt class="py-lineno"> 674</tt>  <tt class="py-line">    <tt class="py-name">kStringMaxLen</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L675"></a><tt class="py-lineno"> 675</tt>  <tt class="py-line">    <tt class="py-name">t_naa</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ndarray</tt> </tt>
<a name="L676"></a><tt class="py-lineno"> 676</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt id="link-122" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-122', 'string', 'link-14');">string</a></tt> </tt>
<a name="L677"></a><tt class="py-lineno"> 677</tt>  <tt class="py-line"> </tt>
<a name="L678"></a><tt class="py-lineno"> 678</tt>  <tt class="py-line"> </tt>
<a name="L679"></a><tt class="py-lineno"> 679</tt>  <tt class="py-line">    <tt class="py-name">gsF</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L680"></a><tt class="py-lineno"> 680</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-123" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-123', 'k', 'link-99');">k</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">gs</tt><tt class="py-op">:</tt> </tt>
<a name="L681"></a><tt class="py-lineno"> 681</tt>  <tt class="py-line">        <tt class="py-name">o</tt> <tt class="py-op">=</tt> <tt class="py-name">gs</tt><tt class="py-op">[</tt><tt id="link-124" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-124', 'k', 'link-99');">k</a></tt><tt class="py-op">]</tt> </tt>
<a name="L682"></a><tt class="py-lineno"> 682</tt>  <tt class="py-line">        <tt class="py-name">t</tt> <tt class="py-op">=</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">o</tt><tt class="py-op">)</tt> </tt>
<a name="L683"></a><tt class="py-lineno"> 683</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">t</tt> <tt class="py-op">==</tt> <tt class="py-name">t_naa</tt><tt class="py-op">:</tt> </tt>
<a name="L684"></a><tt class="py-lineno"> 684</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">inclSize</tt><tt class="py-op">:</tt> </tt>
<a name="L685"></a><tt class="py-lineno"> 685</tt>  <tt class="py-line">                <tt class="py-name">f</tt> <tt class="py-op">=</tt> <tt id="link-125" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-125', 'string', 'link-14');">string</a></tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt> <tt class="py-name">repr</tt><tt class="py-op">(</tt><tt class="py-name">o</tt><tt class="py-op">.</tt><tt class="py-name">_data</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L686"></a><tt class="py-lineno"> 686</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-string">'&lt;memory'</tt><tt class="py-op">:</tt> </tt>
<a name="L687"></a><tt class="py-lineno"> 687</tt>  <tt class="py-line">                    <tt class="py-name">fs</tt> <tt class="py-op">=</tt> <tt id="link-126" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-126', 'string', 'link-14');">string</a></tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt> <tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-number">4</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-string">':'</tt> <tt class="py-op">)</tt> </tt>
<a name="L688"></a><tt class="py-lineno"> 688</tt>  <tt class="py-line">                    <tt id="link-127" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-127', 'size', 'link-107');">size</a></tt>   <tt class="py-op">=</tt> <tt class="py-name">eval</tt><tt class="py-op">(</tt> <tt class="py-name">fs</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt> </tt>
<a name="L689"></a><tt class="py-lineno"> 689</tt>  <tt class="py-line">                    <tt class="py-name">memAt</tt>  <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt> </tt>
<a name="L690"></a><tt class="py-lineno"> 690</tt>  <tt class="py-line">                    <tt class="py-name">objNum</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-number">8</tt><tt class="py-op">]</tt> </tt>
<a name="L691"></a><tt class="py-lineno"> 691</tt>  <tt class="py-line">                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L692"></a><tt class="py-lineno"> 692</tt>  <tt class="py-line">                    <tt class="py-name">fs</tt> <tt class="py-op">=</tt> <tt id="link-128" class="py-name"><a title="Priithon.string" class="py-name" href="#" onclick="return doclink('link-128', 'string', 'link-14');">string</a></tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt> <tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-string">':'</tt> <tt class="py-op">)</tt> </tt>
<a name="L693"></a><tt class="py-lineno"> 693</tt>  <tt class="py-line">                    <tt id="link-129" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-129', 'size', 'link-107');">size</a></tt>   <tt class="py-op">=</tt> <tt class="py-name">eval</tt><tt class="py-op">(</tt> <tt class="py-name">fs</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt> </tt>
<a name="L694"></a><tt class="py-lineno"> 694</tt>  <tt class="py-line">                    <tt class="py-name">memAt</tt>  <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L695"></a><tt class="py-lineno"> 695</tt>  <tt class="py-line">                    <tt class="py-name">objNum</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L696"></a><tt class="py-lineno"> 696</tt>  <tt class="py-line">                    <tt class="py-name">gsF</tt> <tt class="py-op">+=</tt> <tt class="py-op">[</tt><tt class="py-op">(</tt><tt id="link-130" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-130', 'k', 'link-99');">k</a></tt><tt class="py-op">,</tt> <tt id="link-131" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-131', 'size', 'link-107');">size</a></tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L697"></a><tt class="py-lineno"> 697</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L698"></a><tt class="py-lineno"> 698</tt>  <tt class="py-line">                <tt class="py-name">gsF</tt> <tt class="py-op">+=</tt> <tt id="link-132" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-132', 'k', 'link-99');">k</a></tt> </tt>
<a name="L699"></a><tt class="py-lineno"> 699</tt>  <tt class="py-line">        <tt class="py-name">gsF</tt><tt class="py-op">.</tt><tt class="py-name">sort</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L700"></a><tt class="py-lineno"> 700</tt>  <tt class="py-line">        <tt class="py-keyword">print</tt> <tt class="py-name">gsF</tt> </tt>
<a name="L701"></a><tt class="py-lineno"> 701</tt>  <tt class="py-line">        <tt class="py-string">'''</tt> </tt>
<a name="L702"></a><tt class="py-lineno"> 702</tt>  <tt class="py-line"><tt class="py-string">    for k in gs:</tt> </tt>
<a name="L703"></a><tt class="py-lineno"> 703</tt>  <tt class="py-line"><tt class="py-string">        if len(k) &lt; kStringMaxLen:</tt> </tt>
<a name="L704"></a><tt class="py-lineno"> 704</tt>  <tt class="py-line"><tt class="py-string">            kStringMaxLen = len(k)</tt> </tt>
<a name="L705"></a><tt class="py-lineno"> 705</tt>  <tt class="py-line"><tt class="py-string">        o = gs[k]</tt> </tt>
<a name="L706"></a><tt class="py-lineno"> 706</tt>  <tt class="py-line"><tt class="py-string">        t = type(o)</tt> </tt>
<a name="L707"></a><tt class="py-lineno"> 707</tt>  <tt class="py-line"><tt class="py-string">        if t == t_naa:</tt> </tt>
<a name="L708"></a><tt class="py-lineno"> 708</tt>  <tt class="py-line"><tt class="py-string">            #print k # , t</tt> </tt>
<a name="L709"></a><tt class="py-lineno"> 709</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L710"></a><tt class="py-lineno"> 710</tt>  <tt class="py-line"><tt class="py-string">            #print repr(o._data)</tt> </tt>
<a name="L711"></a><tt class="py-lineno"> 711</tt>  <tt class="py-line"><tt class="py-string">            #print objNum, memAt, size</tt> </tt>
<a name="L712"></a><tt class="py-lineno"> 712</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L713"></a><tt class="py-lineno"> 713</tt>  <tt class="py-line"><tt class="py-string">            try:</tt> </tt>
<a name="L714"></a><tt class="py-lineno"> 714</tt>  <tt class="py-line"><tt class="py-string">                arrs[ memAt ][0] += 1</tt> </tt>
<a name="L715"></a><tt class="py-lineno"> 715</tt>  <tt class="py-line"><tt class="py-string">                arrs[ memAt ][2].append( size )</tt> </tt>
<a name="L716"></a><tt class="py-lineno"> 716</tt>  <tt class="py-line"><tt class="py-string">            except:</tt> </tt>
<a name="L717"></a><tt class="py-lineno"> 717</tt>  <tt class="py-line"><tt class="py-string">                arrs[ memAt ] = [ 1, k, [size] ]</tt> </tt>
<a name="L718"></a><tt class="py-lineno"> 718</tt>  <tt class="py-line"><tt class="py-string">                totsize += size</tt> </tt>
<a name="L719"></a><tt class="py-lineno"> 719</tt>  <tt class="py-line"><tt class="py-string">                totnum  += 1</tt> </tt>
<a name="L720"></a><tt class="py-lineno"> 720</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L721"></a><tt class="py-lineno"> 721</tt>  <tt class="py-line"><tt class="py-string">    def sebsort(m1,m2):</tt> </tt>
<a name="L722"></a><tt class="py-lineno"> 722</tt>  <tt class="py-line"><tt class="py-string">        global arrs</tt> </tt>
<a name="L723"></a><tt class="py-lineno"> 723</tt>  <tt class="py-line"><tt class="py-string">        import __builtin__</tt> </tt>
<a name="L724"></a><tt class="py-lineno"> 724</tt>  <tt class="py-line"><tt class="py-string">        k1 = arrs[ m1 ][1]</tt> </tt>
<a name="L725"></a><tt class="py-lineno"> 725</tt>  <tt class="py-line"><tt class="py-string">        k2 = arrs[ m2 ][1]</tt> </tt>
<a name="L726"></a><tt class="py-lineno"> 726</tt>  <tt class="py-line"><tt class="py-string">        return __builtin__.cmp(k1,    k2)</tt> </tt>
<a name="L727"></a><tt class="py-lineno"> 727</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L728"></a><tt class="py-lineno"> 728</tt>  <tt class="py-line"><tt class="py-string">    ms = arrs.keys()</tt> </tt>
<a name="L729"></a><tt class="py-lineno"> 729</tt>  <tt class="py-line"><tt class="py-string">    ms.sort( sebsort )</tt> </tt>
<a name="L730"></a><tt class="py-lineno"> 730</tt>  <tt class="py-line"><tt class="py-string">    for memAt in ms:</tt> </tt>
<a name="L731"></a><tt class="py-lineno"> 731</tt>  <tt class="py-line"><tt class="py-string">        k     = arrs[ memAt ][1]</tt> </tt>
<a name="L732"></a><tt class="py-lineno"> 732</tt>  <tt class="py-line"><tt class="py-string">        size = arrs[ memAt ][2][0]</tt> </tt>
<a name="L733"></a><tt class="py-lineno"> 733</tt>  <tt class="py-line"><tt class="py-string">        o = gs[k]</tt> </tt>
<a name="L734"></a><tt class="py-lineno"> 734</tt>  <tt class="py-line"><tt class="py-string">        </tt> </tt>
<a name="L735"></a><tt class="py-lineno"> 735</tt>  <tt class="py-line"><tt class="py-string">        print "%8.2fk %-*s %14s %15s %10s" %(size/1024., kStringMaxLen, k, o.type(), o.shape, memAt)</tt> </tt>
<a name="L736"></a><tt class="py-lineno"> 736</tt>  <tt class="py-line"><tt class="py-string">        '''</tt> </tt>
</div><a name="L737"></a><tt class="py-lineno"> 737</tt>  <tt class="py-line"> </tt>
<a name="deriv1D"></a><div id="deriv1D-def"><a name="L738"></a><tt class="py-lineno"> 738</tt> <a class="py-toggle" href="#" id="deriv1D-toggle" onclick="return toggle('deriv1D');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#deriv1D">deriv1D</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">reverse</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="deriv1D-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="deriv1D-expanded"><a name="L739"></a><tt class="py-lineno"> 739</tt>  <tt class="py-line">    <tt class="py-docstring">"""poor mans derivative:</tt> </tt>
<a name="L740"></a><tt class="py-lineno"> 740</tt>  <tt class="py-line"><tt class="py-docstring">    if reverse:</tt> </tt>
<a name="L741"></a><tt class="py-lineno"> 741</tt>  <tt class="py-line"><tt class="py-docstring">        returns arr[:-1] - arr[1:]</tt> </tt>
<a name="L742"></a><tt class="py-lineno"> 742</tt>  <tt class="py-line"><tt class="py-docstring">    else</tt> </tt>
<a name="L743"></a><tt class="py-lineno"> 743</tt>  <tt class="py-line"><tt class="py-docstring">        returns arr[1:] - arr[:-1]</tt> </tt>
<a name="L744"></a><tt class="py-lineno"> 744</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L745"></a><tt class="py-lineno"> 745</tt>  <tt class="py-line">    <tt id="link-133" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-133', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-134" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-134', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L746"></a><tt class="py-lineno"> 746</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">reverse</tt><tt class="py-op">:</tt> </tt>
<a name="L747"></a><tt class="py-lineno"> 747</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt id="link-135" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-135', 'arr', 'link-41');">arr</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt id="link-136" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-136', 'arr', 'link-41');">arr</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L748"></a><tt class="py-lineno"> 748</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L749"></a><tt class="py-lineno"> 749</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt id="link-137" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-137', 'arr', 'link-41');">arr</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt id="link-138" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-138', 'arr', 'link-41');">arr</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
</div><a name="L750"></a><tt class="py-lineno"> 750</tt>  <tt class="py-line"> </tt>
<a name="L751"></a><tt class="py-lineno"> 751</tt>  <tt class="py-line">    </tt>
<a name="L752"></a><tt class="py-lineno"> 752</tt>  <tt class="py-line"> </tt>
<a name="checkGoodArrayF"></a><div id="checkGoodArrayF-def"><a name="L753"></a><tt class="py-lineno"> 753</tt> <a class="py-toggle" href="#" id="checkGoodArrayF-toggle" onclick="return toggle('checkGoodArrayF');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#checkGoodArrayF">checkGoodArrayF</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">argnum</tt><tt class="py-op">,</tt> <tt class="py-param">shape</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="checkGoodArrayF-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="checkGoodArrayF-expanded"><a name="L754"></a><tt class="py-lineno"> 754</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt id="link-139" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-139', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt class="py-name">flags</tt><tt class="py-op">.</tt><tt class="py-name">carray</tt><tt class="py-op">:</tt> </tt>
<a name="L755"></a><tt class="py-lineno"> 755</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">RuntimeError</tt><tt class="py-op">,</tt> <tt class="py-string">"*** non contiguous arg %s ** maybe use zeroArrF"</tt> <tt class="py-op">%</tt> <tt class="py-name">argnum</tt> </tt>
<a name="L756"></a><tt class="py-lineno"> 756</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-140" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-140', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-141" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-141', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">type</tt> <tt class="py-op">!=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float32</tt><tt class="py-op">:</tt> </tt>
<a name="L757"></a><tt class="py-lineno"> 757</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">RuntimeError</tt><tt class="py-op">,</tt> <tt class="py-string">"*** non Float32 arg %s ** maybe use zeroArrF"</tt> <tt class="py-op">%</tt> <tt class="py-name">argnum</tt> </tt>
<a name="L758"></a><tt class="py-lineno"> 758</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt id="link-142" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-142', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-143" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-143', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">isnative</tt><tt class="py-op">:</tt> </tt>
<a name="L759"></a><tt class="py-lineno"> 759</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">RuntimeError</tt><tt class="py-op">,</tt> <tt class="py-string">"*** non native byteorder: arg %s ** maybe use zeroArrF"</tt> <tt class="py-op">%</tt> <tt class="py-name">argnum</tt> </tt>
<a name="L760"></a><tt class="py-lineno"> 760</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-144" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-144', 'shape', 'link-58');">shape</a></tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt> <tt class="py-keyword">and</tt> <tt id="link-145" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-145', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">!=</tt> <tt id="link-146" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-146', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-147" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-147', 'shape', 'link-58');">shape</a></tt><tt class="py-op">:</tt> </tt>
<a name="L761"></a><tt class="py-lineno"> 761</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">RuntimeError</tt><tt class="py-op">,</tt> <tt class="py-string">"*** arg %d should have shape %s, but has shape %s"</tt> \ </tt>
<a name="L762"></a><tt class="py-lineno"> 762</tt>  <tt class="py-line">                   <tt class="py-op">%</tt> <tt class="py-op">(</tt><tt class="py-name">argnum</tt><tt class="py-op">,</tt> <tt id="link-148" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-148', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt> <tt id="link-149" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-149', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-150" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-150', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> </tt>
</div><a name="L763"></a><tt class="py-lineno"> 763</tt>  <tt class="py-line"> </tt>
<a name="L764"></a><tt class="py-lineno"> 764</tt>  <tt class="py-line"> </tt>
<a name="arrSharedMemory"></a><div id="arrSharedMemory-def"><a name="L765"></a><tt class="py-lineno"> 765</tt> <a class="py-toggle" href="#" id="arrSharedMemory-toggle" onclick="return toggle('arrSharedMemory');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#arrSharedMemory">arrSharedMemory</a><tt class="py-op">(</tt><tt class="py-param">shape</tt><tt class="py-op">,</tt> <tt class="py-param">dtype</tt><tt class="py-op">,</tt> <tt class="py-param">tag</tt><tt class="py-op">=</tt><tt class="py-string">"PriithonSharedMemory"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="arrSharedMemory-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="arrSharedMemory-expanded"><a name="L766"></a><tt class="py-lineno"> 766</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L767"></a><tt class="py-lineno"> 767</tt>  <tt class="py-line"><tt class="py-docstring">    Windows only !</tt> </tt>
<a name="L768"></a><tt class="py-lineno"> 768</tt>  <tt class="py-line"><tt class="py-docstring">    share memory between different processes if same `tag` is used.</tt> </tt>
<a name="L769"></a><tt class="py-lineno"> 769</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L770"></a><tt class="py-lineno"> 770</tt>  <tt class="py-line">    <tt class="py-name">itemsize</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-151" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-151', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">(</tt><tt id="link-152" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-152', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">itemsize</tt> </tt>
<a name="L771"></a><tt class="py-lineno"> 771</tt>  <tt class="py-line">    <tt class="py-name">count</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">product</tt><tt class="py-op">(</tt><tt id="link-153" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-153', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> </tt>
<a name="L772"></a><tt class="py-lineno"> 772</tt>  <tt class="py-line">    <tt id="link-154" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-154', 'size', 'link-107');">size</a></tt> <tt class="py-op">=</tt>  <tt class="py-name">count</tt> <tt class="py-op">*</tt> <tt class="py-name">itemsize</tt> </tt>
<a name="L773"></a><tt class="py-lineno"> 773</tt>  <tt class="py-line">     </tt>
<a name="L774"></a><tt class="py-lineno"> 774</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">mmap</tt> </tt>
<a name="L775"></a><tt class="py-lineno"> 775</tt>  <tt class="py-line">    <tt class="py-name">sharedmem</tt> <tt class="py-op">=</tt> <tt class="py-name">mmap</tt><tt class="py-op">.</tt><tt class="py-name">mmap</tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt id="link-155" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-155', 'size', 'link-107');">size</a></tt><tt class="py-op">,</tt> <tt class="py-name">tag</tt><tt class="py-op">)</tt> </tt>
<a name="L776"></a><tt class="py-lineno"> 776</tt>  <tt class="py-line">    <tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">frombuffer</tt><tt class="py-op">(</tt><tt class="py-name">sharedmem</tt><tt class="py-op">,</tt> <tt id="link-156" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-156', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">,</tt> <tt class="py-name">count</tt><tt class="py-op">)</tt> </tt>
<a name="L777"></a><tt class="py-lineno"> 777</tt>  <tt class="py-line">    <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-157" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-157', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt id="link-158" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-158', 'shape', 'link-58');">shape</a></tt> </tt>
<a name="L778"></a><tt class="py-lineno"> 778</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">a</tt> </tt>
</div><a name="L779"></a><tt class="py-lineno"> 779</tt>  <tt class="py-line"> </tt>
<a name="L780"></a><tt class="py-lineno"> 780</tt>  <tt class="py-line"> </tt>
<a name="arr"></a><div id="arr-def"><a name="L781"></a><tt class="py-lineno"> 781</tt> <a class="py-toggle" href="#" id="arr-toggle" onclick="return toggle('arr');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#arr">arr</a><tt class="py-op">(</tt><tt class="py-param">dtype</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-op">*</tt><tt class="py-param">args</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="arr-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="arr-expanded"><a name="L782"></a><tt class="py-lineno"> 782</tt>  <tt class="py-line">    <tt class="py-docstring">"""return args tuple as array</tt> </tt>
<a name="L783"></a><tt class="py-lineno"> 783</tt>  <tt class="py-line"><tt class="py-docstring">    if dtype is None use "default/automatic" dtype</tt> </tt>
<a name="L784"></a><tt class="py-lineno"> 784</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L785"></a><tt class="py-lineno"> 785</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-name">args</tt><tt class="py-op">,</tt> <tt id="link-159" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-159', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt id="link-160" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-160', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">)</tt> </tt>
</div><a name="arrF"></a><div id="arrF-def"><a name="L786"></a><tt class="py-lineno"> 786</tt> <a class="py-toggle" href="#" id="arrF-toggle" onclick="return toggle('arrF');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#arrF">arrF</a><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-param">args</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="arrF-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="arrF-expanded"><a name="L787"></a><tt class="py-lineno"> 787</tt>  <tt class="py-line">    <tt class="py-docstring">"""return args tuple as array dtype=Float32</tt> </tt>
<a name="L788"></a><tt class="py-lineno"> 788</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L789"></a><tt class="py-lineno"> 789</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-name">args</tt><tt class="py-op">,</tt> <tt id="link-161" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-161', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float32</tt><tt class="py-op">)</tt> </tt>
</div><a name="arrD"></a><div id="arrD-def"><a name="L790"></a><tt class="py-lineno"> 790</tt> <a class="py-toggle" href="#" id="arrD-toggle" onclick="return toggle('arrD');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#arrD">arrD</a><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-param">args</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="arrD-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="arrD-expanded"><a name="L791"></a><tt class="py-lineno"> 791</tt>  <tt class="py-line">    <tt class="py-docstring">"""return args tuple as array dtype=Float64</tt> </tt>
<a name="L792"></a><tt class="py-lineno"> 792</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L793"></a><tt class="py-lineno"> 793</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-name">args</tt><tt class="py-op">,</tt> <tt id="link-162" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-162', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float64</tt><tt class="py-op">)</tt> </tt>
</div><a name="arrI"></a><div id="arrI-def"><a name="L794"></a><tt class="py-lineno"> 794</tt> <a class="py-toggle" href="#" id="arrI-toggle" onclick="return toggle('arrI');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#arrI">arrI</a><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-param">args</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="arrI-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="arrI-expanded"><a name="L795"></a><tt class="py-lineno"> 795</tt>  <tt class="py-line">    <tt class="py-docstring">"""return args tuple as array dtype=Int32</tt> </tt>
<a name="L796"></a><tt class="py-lineno"> 796</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L797"></a><tt class="py-lineno"> 797</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-name">args</tt><tt class="py-op">,</tt> <tt id="link-163" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-163', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">int32</tt><tt class="py-op">)</tt> </tt>
</div><a name="arrU"></a><div id="arrU-def"><a name="L798"></a><tt class="py-lineno"> 798</tt> <a class="py-toggle" href="#" id="arrU-toggle" onclick="return toggle('arrU');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#arrU">arrU</a><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-param">args</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="arrU-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="arrU-expanded"><a name="L799"></a><tt class="py-lineno"> 799</tt>  <tt class="py-line">    <tt class="py-docstring">"""return args tuple as array dtype=UInt16</tt> </tt>
<a name="L800"></a><tt class="py-lineno"> 800</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L801"></a><tt class="py-lineno"> 801</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-name">args</tt><tt class="py-op">,</tt> <tt id="link-164" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-164', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint16</tt><tt class="py-op">)</tt> </tt>
</div><a name="arrS"></a><div id="arrS-def"><a name="L802"></a><tt class="py-lineno"> 802</tt> <a class="py-toggle" href="#" id="arrS-toggle" onclick="return toggle('arrS');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#arrS">arrS</a><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-param">args</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="arrS-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="arrS-expanded"><a name="L803"></a><tt class="py-lineno"> 803</tt>  <tt class="py-line">    <tt class="py-docstring">"""return args tuple as array dtype=Int16</tt> </tt>
<a name="L804"></a><tt class="py-lineno"> 804</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L805"></a><tt class="py-lineno"> 805</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-name">args</tt><tt class="py-op">,</tt> <tt id="link-165" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-165', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">int16</tt><tt class="py-op">)</tt> </tt>
</div><a name="arrC"></a><div id="arrC-def"><a name="L806"></a><tt class="py-lineno"> 806</tt> <a class="py-toggle" href="#" id="arrC-toggle" onclick="return toggle('arrC');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#arrC">arrC</a><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-param">args</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="arrC-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="arrC-expanded"><a name="L807"></a><tt class="py-lineno"> 807</tt>  <tt class="py-line">    <tt class="py-docstring">"""return args tuple as array dtype=Complex64 (single prec)</tt> </tt>
<a name="L808"></a><tt class="py-lineno"> 808</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L809"></a><tt class="py-lineno"> 809</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-name">args</tt><tt class="py-op">,</tt> <tt id="link-166" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-166', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">complex64</tt><tt class="py-op">)</tt> </tt>
</div><a name="arrCC"></a><div id="arrCC-def"><a name="L810"></a><tt class="py-lineno"> 810</tt> <a class="py-toggle" href="#" id="arrCC-toggle" onclick="return toggle('arrCC');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#arrCC">arrCC</a><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-param">args</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="arrCC-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="arrCC-expanded"><a name="L811"></a><tt class="py-lineno"> 811</tt>  <tt class="py-line">    <tt class="py-docstring">"""return args tuple as array dtype=Complex128 (double prec)</tt> </tt>
<a name="L812"></a><tt class="py-lineno"> 812</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L813"></a><tt class="py-lineno"> 813</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-name">args</tt><tt class="py-op">,</tt> <tt id="link-167" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-167', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">complex128</tt><tt class="py-op">)</tt> </tt>
</div><a name="L814"></a><tt class="py-lineno"> 814</tt>  <tt class="py-line"> </tt>
<a name="asFloat32"></a><div id="asFloat32-def"><a name="L815"></a><tt class="py-lineno"> 815</tt> <a class="py-toggle" href="#" id="asFloat32-toggle" onclick="return toggle('asFloat32');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#asFloat32">asFloat32</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="asFloat32-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="asFloat32-expanded"><a name="L816"></a><tt class="py-lineno"> 816</tt>  <tt class="py-line">    <tt class="py-docstring">"""returns N.asarray(a, N.Float32)"""</tt> </tt>
<a name="L817"></a><tt class="py-lineno"> 817</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float32</tt><tt class="py-op">)</tt> </tt>
</div><a name="L818"></a><tt class="py-lineno"> 818</tt>  <tt class="py-line"> </tt>
<a name="asUInt16"></a><div id="asUInt16-def"><a name="L819"></a><tt class="py-lineno"> 819</tt> <a class="py-toggle" href="#" id="asUInt16-toggle" onclick="return toggle('asUInt16');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#asUInt16">asUInt16</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">round</tt><tt class="py-op">=</tt><tt id="link-168" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-168', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">setMinTo0</tt><tt class="py-op">=</tt><tt id="link-169" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-169', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">rescaleToMax</tt><tt class="py-op">=</tt><tt id="link-170" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-170', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="asUInt16-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="asUInt16-expanded"><a name="L820"></a><tt class="py-lineno"> 820</tt>  <tt class="py-line">    <tt class="py-docstring">"""returns N.asarray(a, N.uint16)</tt> </tt>
<a name="L821"></a><tt class="py-lineno"> 821</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L822"></a><tt class="py-lineno"> 822</tt>  <tt class="py-line"><tt class="py-docstring">    `setMinTo0`: if True, subtract (negative) minimum</tt> </tt>
<a name="L823"></a><tt class="py-lineno"> 823</tt>  <tt class="py-line"><tt class="py-docstring">    `rescaleToMax`: if True or 1 rescale data to min..65535</tt> </tt>
<a name="L824"></a><tt class="py-lineno"> 824</tt>  <tt class="py-line"><tt class="py-docstring">         if `rescaleToMax` is a number &gt; 1: rescale data to min..`rescaleToMax`</tt> </tt>
<a name="L825"></a><tt class="py-lineno"> 825</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L826"></a><tt class="py-lineno"> 826</tt>  <tt class="py-line"><tt class="py-docstring">    `round`: add +.5 before conversion to int</tt> </tt>
<a name="L827"></a><tt class="py-lineno"> 827</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L828"></a><tt class="py-lineno"> 828</tt>  <tt class="py-line"><tt class="py-docstring">    TODO/FIXME:  optimize memory usage of this function !!</tt> </tt>
<a name="L829"></a><tt class="py-lineno"> 829</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L830"></a><tt class="py-lineno"> 830</tt>  <tt class="py-line">     </tt>
<a name="L831"></a><tt class="py-lineno"> 831</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">setMinTo0</tt><tt class="py-op">:</tt> </tt>
<a name="L832"></a><tt class="py-lineno"> 832</tt>  <tt class="py-line">        <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">-</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-171" class="py-name" targets="Function Priithon.useful.min()=Priithon.useful-module.html#min"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-171', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L833"></a><tt class="py-lineno"> 833</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">rescaleToMax</tt><tt class="py-op">:</tt> </tt>
<a name="L834"></a><tt class="py-lineno"> 834</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">rescaleToMax</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt>  <tt class="py-comment"># this includes `True`</tt> </tt>
<a name="L835"></a><tt class="py-lineno"> 835</tt>  <tt class="py-line">            <tt class="py-name">rescaleToMax</tt> <tt class="py-op">=</tt> <tt class="py-number">65535</tt> </tt>
<a name="L836"></a><tt class="py-lineno"> 836</tt>  <tt class="py-line">        <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-number">65535.</tt><tt class="py-op">/</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-172" class="py-name" targets="Function Priithon.useful.max()=Priithon.useful-module.html#max"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-172', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L837"></a><tt class="py-lineno"> 837</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">round</tt><tt class="py-op">:</tt> </tt>
<a name="L838"></a><tt class="py-lineno"> 838</tt>  <tt class="py-line">        <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">+</tt><tt class="py-number">.5</tt> </tt>
<a name="L839"></a><tt class="py-lineno"> 839</tt>  <tt class="py-line"> </tt>
<a name="L840"></a><tt class="py-lineno"> 840</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint16</tt><tt class="py-op">)</tt> </tt>
</div><a name="L841"></a><tt class="py-lineno"> 841</tt>  <tt class="py-line"> </tt>
<a name="norm"></a><div id="norm-def"><a name="L842"></a><tt class="py-lineno"> 842</tt> <a class="py-toggle" href="#" id="norm-toggle" onclick="return toggle('norm');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#norm">norm</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">axis</tt><tt class="py-op">=</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="norm-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="norm-expanded"><a name="L843"></a><tt class="py-lineno"> 843</tt>  <tt class="py-line">    <tt class="py-docstring">"""return array with ndim arr.ndim-1</tt> </tt>
<a name="L844"></a><tt class="py-lineno"> 844</tt>  <tt class="py-line"><tt class="py-docstring">        return N.sqrt(N.sum(arr**2, axis)</tt> </tt>
<a name="L845"></a><tt class="py-lineno"> 845</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L846"></a><tt class="py-lineno"> 846</tt>  <tt class="py-line"><tt class="py-docstring">U.norm([3,4])</tt> </tt>
<a name="L847"></a><tt class="py-lineno"> 847</tt>  <tt class="py-line"><tt class="py-docstring">5.0</tt> </tt>
<a name="L848"></a><tt class="py-lineno"> 848</tt>  <tt class="py-line"><tt class="py-docstring">U.timeIt("U.norm([3,4])", 100000)</tt> </tt>
<a name="L849"></a><tt class="py-lineno"> 849</tt>  <tt class="py-line"><tt class="py-docstring">(0.0, 0.02, 0.000384, 0.00192211966329)</tt> </tt>
<a name="L850"></a><tt class="py-lineno"> 850</tt>  <tt class="py-line"><tt class="py-docstring">U.timeIt("U.norm([3])", 100000)</tt> </tt>
<a name="L851"></a><tt class="py-lineno"> 851</tt>  <tt class="py-line"><tt class="py-docstring">(0.0, 0.02, 0.0003597, 0.00186269050301)</tt> </tt>
<a name="L852"></a><tt class="py-lineno"> 852</tt>  <tt class="py-line"><tt class="py-docstring">a = na.asarray([3,4])</tt> </tt>
<a name="L853"></a><tt class="py-lineno"> 853</tt>  <tt class="py-line"><tt class="py-docstring">U.timeIt("U.norm(a)", 100000)</tt> </tt>
<a name="L854"></a><tt class="py-lineno"> 854</tt>  <tt class="py-line"><tt class="py-docstring">(0.0, 0.01, 0.0001728, 0.00130312706978)</tt> </tt>
<a name="L855"></a><tt class="py-lineno"> 855</tt>  <tt class="py-line"><tt class="py-docstring">a = na.asarray([3])</tt> </tt>
<a name="L856"></a><tt class="py-lineno"> 856</tt>  <tt class="py-line"><tt class="py-docstring">U.timeIt("U.norm(a)", 100000)</tt> </tt>
<a name="L857"></a><tt class="py-lineno"> 857</tt>  <tt class="py-line"><tt class="py-docstring">(0.0, 0.01, 0.0001689, 0.00128859333771)</tt> </tt>
<a name="L858"></a><tt class="py-lineno"> 858</tt>  <tt class="py-line"><tt class="py-docstring">U.timeIt("na.abs(a)", 100000)</tt> </tt>
<a name="L859"></a><tt class="py-lineno"> 859</tt>  <tt class="py-line"><tt class="py-docstring">(0.0, 0.02, 0.0001107, 0.00104725618165)</tt> </tt>
<a name="L860"></a><tt class="py-lineno"> 860</tt>  <tt class="py-line"><tt class="py-docstring">U.timeIt("abs(a)", 100000)</tt> </tt>
<a name="L861"></a><tt class="py-lineno"> 861</tt>  <tt class="py-line"><tt class="py-docstring">(0.0, 0.01, 0.0001092, 0.00103926674151)</tt> </tt>
<a name="L862"></a><tt class="py-lineno"> 862</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L863"></a><tt class="py-lineno"> 863</tt>  <tt class="py-line">    <tt id="link-173" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-173', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-174" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-174', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L864"></a><tt class="py-lineno"> 864</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-175" class="py-name" targets="Variable Priithon.mandel.sqrt=Priithon.mandel-module.html#sqrt,Variable Priithon.plt.interface.sqrt=Priithon.plt.interface-module.html#sqrt,Variable Priithon.plt.plot_objects.sqrt=Priithon.plt.plot_objects-module.html#sqrt,Variable Priithon.plt.plot_utility.sqrt=Priithon.plt.plot_utility-module.html#sqrt,Variable Priithon.plt.sqrt=Priithon.plt-module.html#sqrt,Variable Priithon.plt.wxplt.sqrt=Priithon.plt.wxplt-module.html#sqrt"><a title="Priithon.mandel.sqrt
Priithon.plt.interface.sqrt
Priithon.plt.plot_objects.sqrt
Priithon.plt.plot_utility.sqrt
Priithon.plt.sqrt
Priithon.plt.wxplt.sqrt" class="py-name" href="#" onclick="return doclink('link-175', 'sqrt', 'link-175');">sqrt</a></tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt id="link-176" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-176', 'arr', 'link-41');">arr</a></tt><tt class="py-op">**</tt><tt class="py-number">2</tt><tt class="py-op">,</tt> <tt id="link-177" class="py-name" targets="Function Priithon.plt.interface.axis()=Priithon.plt.interface-module.html#axis,Method Priithon.plt.wxplt.plot_canvas.axis()=Priithon.plt.wxplt.plot_canvas-class.html#axis"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-177', 'axis', 'link-177');">axis</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L865"></a><tt class="py-lineno"> 865</tt>  <tt class="py-line"> </tt>
<a name="clip"></a><div id="clip-def"><a name="L866"></a><tt class="py-lineno"> 866</tt> <a class="py-toggle" href="#" id="clip-toggle" onclick="return toggle('clip');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#clip">clip</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt><tt class="py-param">min</tt><tt class="py-op">,</tt><tt class="py-param">max</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="clip-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="clip-expanded"><a name="L867"></a><tt class="py-lineno"> 867</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L868"></a><tt class="py-lineno"> 868</tt>  <tt class="py-line"><tt class="py-docstring">    clips arr *inplace*</tt> </tt>
<a name="L869"></a><tt class="py-lineno"> 869</tt>  <tt class="py-line"><tt class="py-docstring">    returns arr</tt> </tt>
<a name="L870"></a><tt class="py-lineno"> 870</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L871"></a><tt class="py-lineno"> 871</tt>  <tt class="py-line">    <tt id="link-178" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-178', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-179" class="py-name" targets="Function Priithon.useful._getGoodifiedArray()=Priithon.useful-module.html#_getGoodifiedArray"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-179', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt id="link-180" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-180', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L872"></a><tt class="py-lineno"> 872</tt>  <tt class="py-line">    <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-181" class="py-name" targets="Function Priithon.useful.clip()=Priithon.useful-module.html#clip"><a title="Priithon.useful.clip" class="py-name" href="#" onclick="return doclink('link-181', 'clip', 'link-181');">clip</a></tt><tt class="py-op">(</tt> <tt id="link-182" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-182', 'arr', 'link-41');">arr</a></tt><tt class="py-op">,</tt> <tt id="link-183" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-183', 'min', 'link-171');">min</a></tt><tt class="py-op">,</tt> <tt id="link-184" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-184', 'max', 'link-172');">max</a></tt> <tt class="py-op">)</tt> </tt>
<a name="L873"></a><tt class="py-lineno"> 873</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-185" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-185', 'arr', 'link-41');">arr</a></tt> </tt>
</div><a name="L874"></a><tt class="py-lineno"> 874</tt>  <tt class="py-line"> </tt>
<a name="findMax"></a><div id="findMax-def"><a name="L875"></a><tt class="py-lineno"> 875</tt> <a class="py-toggle" href="#" id="findMax-toggle" onclick="return toggle('findMax');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#findMax">findMax</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="findMax-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="findMax-expanded"><a name="L876"></a><tt class="py-lineno"> 876</tt>  <tt class="py-line">    <tt class="py-docstring">"""returns value and position of maximum in arr</tt> </tt>
<a name="L877"></a><tt class="py-lineno"> 877</tt>  <tt class="py-line"><tt class="py-docstring">    assumes 3D array, so returned is a 4-tuple: [val,z,y,x]</tt> </tt>
<a name="L878"></a><tt class="py-lineno"> 878</tt>  <tt class="py-line"><tt class="py-docstring">    for 2D or 1D z,y would be respectively 0</tt> </tt>
<a name="L879"></a><tt class="py-lineno"> 879</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L880"></a><tt class="py-lineno"> 880</tt>  <tt class="py-line">    <tt id="link-186" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-186', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-187" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-187', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt id="link-188" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-188', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L881"></a><tt class="py-lineno"> 881</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-189" class="py-name" targets="Function Priithon.useful.findMax()=Priithon.useful-module.html#findMax"><a title="Priithon.useful.findMax" class="py-name" href="#" onclick="return doclink('link-189', 'findMax', 'link-189');">findMax</a></tt><tt class="py-op">(</tt> <tt id="link-190" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-190', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">)</tt> </tt>
</div><a name="findMin"></a><div id="findMin-def"><a name="L882"></a><tt class="py-lineno"> 882</tt> <a class="py-toggle" href="#" id="findMin-toggle" onclick="return toggle('findMin');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#findMin">findMin</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="findMin-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="findMin-expanded"><a name="L883"></a><tt class="py-lineno"> 883</tt>  <tt class="py-line">    <tt class="py-docstring">"""returns value and position of minimum in arr</tt> </tt>
<a name="L884"></a><tt class="py-lineno"> 884</tt>  <tt class="py-line"><tt class="py-docstring">    assumes 3D array, so returned is a 4-tuple: [val,z,y,x]</tt> </tt>
<a name="L885"></a><tt class="py-lineno"> 885</tt>  <tt class="py-line"><tt class="py-docstring">    for 2D or 1D z,y would be respectively 0</tt> </tt>
<a name="L886"></a><tt class="py-lineno"> 886</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L887"></a><tt class="py-lineno"> 887</tt>  <tt class="py-line">    <tt id="link-191" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-191', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-192" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-192', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt id="link-193" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-193', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L888"></a><tt class="py-lineno"> 888</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-194" class="py-name" targets="Function Priithon.useful.findMin()=Priithon.useful-module.html#findMin"><a title="Priithon.useful.findMin" class="py-name" href="#" onclick="return doclink('link-194', 'findMin', 'link-194');">findMin</a></tt><tt class="py-op">(</tt> <tt id="link-195" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-195', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">)</tt> </tt>
</div><a name="L889"></a><tt class="py-lineno"> 889</tt>  <tt class="py-line"> </tt>
<a name="min"></a><div id="min-def"><a name="L890"></a><tt class="py-lineno"> 890</tt> <a class="py-toggle" href="#" id="min-toggle" onclick="return toggle('min');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#min">min</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="min-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="min-expanded"><a name="L891"></a><tt class="py-lineno"> 891</tt>  <tt class="py-line">    <tt id="link-196" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-196', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-197" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-197', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L892"></a><tt class="py-lineno"> 892</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-198" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-198', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-199" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-199', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L893"></a><tt class="py-lineno"> 893</tt>  <tt class="py-line"> </tt>
<a name="max"></a><div id="max-def"><a name="L894"></a><tt class="py-lineno"> 894</tt> <a class="py-toggle" href="#" id="max-toggle" onclick="return toggle('max');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#max">max</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="max-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="max-expanded"><a name="L895"></a><tt class="py-lineno"> 895</tt>  <tt class="py-line">    <tt id="link-200" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-200', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-201" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-201', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L896"></a><tt class="py-lineno"> 896</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-202" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-202', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-203" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-203', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L897"></a><tt class="py-lineno"> 897</tt>  <tt class="py-line"> </tt>
<a name="median"></a><div id="median-def"><a name="L898"></a><tt class="py-lineno"> 898</tt> <a class="py-toggle" href="#" id="median-toggle" onclick="return toggle('median');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#median">median</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="median-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="median-expanded"><a name="L899"></a><tt class="py-lineno"> 899</tt>  <tt class="py-line">    <tt id="link-204" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-204', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-205" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-205', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt id="link-206" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-206', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L900"></a><tt class="py-lineno"> 900</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-207" class="py-name" targets="Function Priithon.useful.median()=Priithon.useful-module.html#median"><a title="Priithon.useful.median" class="py-name" href="#" onclick="return doclink('link-207', 'median', 'link-207');">median</a></tt><tt class="py-op">(</tt> <tt id="link-208" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-208', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">)</tt> </tt>
</div><a name="median2"></a><div id="median2-def"><a name="L901"></a><tt class="py-lineno"> 901</tt> <a class="py-toggle" href="#" id="median2-toggle" onclick="return toggle('median2');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#median2">median2</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="median2-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="median2-expanded"><a name="L902"></a><tt class="py-lineno"> 902</tt>  <tt class="py-line">    <tt class="py-docstring">"""returns both median and "median deviation" (tuple)</tt> </tt>
<a name="L903"></a><tt class="py-lineno"> 903</tt>  <tt class="py-line"><tt class="py-docstring">    (broken on windows !!! returns always -999, see 'seb1.cpp')</tt> </tt>
<a name="L904"></a><tt class="py-lineno"> 904</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L905"></a><tt class="py-lineno"> 905</tt>  <tt class="py-line">    <tt id="link-209" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-209', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-210" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-210', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt id="link-211" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-211', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L906"></a><tt class="py-lineno"> 906</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-212" class="py-name" targets="Function Priithon.useful.median2()=Priithon.useful-module.html#median2"><a title="Priithon.useful.median2" class="py-name" href="#" onclick="return doclink('link-212', 'median2', 'link-212');">median2</a></tt><tt class="py-op">(</tt> <tt id="link-213" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-213', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">)</tt> </tt>
</div><a name="L907"></a><tt class="py-lineno"> 907</tt>  <tt class="py-line"> </tt>
<a name="L908"></a><tt class="py-lineno"> 908</tt>  <tt class="py-line"> </tt>
<a name="mean"></a><div id="mean-def"><a name="L909"></a><tt class="py-lineno"> 909</tt> <a class="py-toggle" href="#" id="mean-toggle" onclick="return toggle('mean');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#mean">mean</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="mean-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="mean-expanded"><a name="L910"></a><tt class="py-lineno"> 910</tt>  <tt class="py-line">    <tt id="link-214" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-214', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-215" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-215', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt id="link-216" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-216', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L911"></a><tt class="py-lineno"> 911</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-217" class="py-name" targets="Function Priithon.useful.mean()=Priithon.useful-module.html#mean"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-217', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt> <tt id="link-218" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-218', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">)</tt>  <tt class="py-comment"># CHECK if should use ns.mean</tt> </tt>
</div><a name="L912"></a><tt class="py-lineno"> 912</tt>  <tt class="py-line"> </tt>
<a name="stddev"></a><div id="stddev-def"><a name="L913"></a><tt class="py-lineno"> 913</tt> <a class="py-toggle" href="#" id="stddev-toggle" onclick="return toggle('stddev');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#stddev">stddev</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="stddev-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="stddev-expanded"><a name="L914"></a><tt class="py-lineno"> 914</tt>  <tt class="py-line">    <tt id="link-219" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-219', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-220" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-220', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L915"></a><tt class="py-lineno"> 915</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">std</tt><tt class="py-op">(</tt><tt id="link-221" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-221', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt class="py-name">flat</tt><tt class="py-op">)</tt> </tt>
</div><a name="L916"></a><tt class="py-lineno"> 916</tt>  <tt class="py-line"> </tt>
<a name="L917"></a><tt class="py-lineno"> 917</tt>  <tt class="py-line"><tt id="link-222" class="py-name" targets="Variable Priithon.useful._FWHM_over_gaussStddev=Priithon.useful-module.html#_FWHM_over_gaussStddev"><a title="Priithon.useful._FWHM_over_gaussStddev" class="py-name" href="#" onclick="return doclink('link-222', '_FWHM_over_gaussStddev', 'link-222');">_FWHM_over_gaussStddev</a></tt> <tt class="py-op">=</tt> <tt class="py-number">2.</tt> <tt class="py-op">*</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-223" class="py-name"><a title="Priithon.mandel.sqrt
Priithon.plt.interface.sqrt
Priithon.plt.plot_objects.sqrt
Priithon.plt.plot_utility.sqrt
Priithon.plt.sqrt
Priithon.plt.wxplt.sqrt" class="py-name" href="#" onclick="return doclink('link-223', 'sqrt', 'link-175');">sqrt</a></tt><tt class="py-op">(</tt><tt class="py-number">2.</tt><tt class="py-op">*</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-224" class="py-name" targets="Variable Priithon.mandel.log=Priithon.mandel-module.html#log,Variable Priithon.plt.interface.log=Priithon.plt.interface-module.html#log,Variable Priithon.plt.log=Priithon.plt-module.html#log,Variable Priithon.plt.plot_objects.log=Priithon.plt.plot_objects-module.html#log,Variable Priithon.plt.plot_utility.log=Priithon.plt.plot_utility-module.html#log,Variable Priithon.plt.wxplt.log=Priithon.plt.wxplt-module.html#log,Method Priithon.wxAsyncDispatcher.DispatcherConnection.log()=Priithon.wxAsyncDispatcher.DispatcherConnection-class.html#log"><a title="Priithon.mandel.log
Priithon.plt.interface.log
Priithon.plt.log
Priithon.plt.plot_objects.log
Priithon.plt.plot_utility.log
Priithon.plt.wxplt.log
Priithon.wxAsyncDispatcher.DispatcherConnection.log" class="py-name" href="#" onclick="return doclink('link-224', 'log', 'link-224');">log</a></tt><tt class="py-op">(</tt><tt class="py-number">2.</tt><tt class="py-op">)</tt><tt class="py-op">)</tt>  </tt>
<a name="L918"></a><tt class="py-lineno"> 918</tt>  <tt class="py-line"> </tt>
<a name="FWHM"></a><div id="FWHM-def"><a name="L919"></a><tt class="py-lineno"> 919</tt> <a class="py-toggle" href="#" id="FWHM-toggle" onclick="return toggle('FWHM');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#FWHM">FWHM</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="FWHM-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="FWHM-expanded"><a name="L920"></a><tt class="py-lineno"> 920</tt>  <tt class="py-line">    <tt class="py-docstring">"""returns Full-Width-Half-Max for gaussian distributions"""</tt> </tt>
<a name="L921"></a><tt class="py-lineno"> 921</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-225" class="py-name"><a title="Priithon.useful._FWHM_over_gaussStddev" class="py-name" href="#" onclick="return doclink('link-225', '_FWHM_over_gaussStddev', 'link-222');">_FWHM_over_gaussStddev</a></tt> <tt class="py-op">*</tt> <tt id="link-226" class="py-name" targets="Function Priithon.useful.stddev()=Priithon.useful-module.html#stddev"><a title="Priithon.useful.stddev" class="py-name" href="#" onclick="return doclink('link-226', 'stddev', 'link-226');">stddev</a></tt><tt class="py-op">(</tt><tt id="link-227" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-227', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
</div><a name="L922"></a><tt class="py-lineno"> 922</tt>  <tt class="py-line"> </tt>
<a name="FWHM_s"></a><div id="FWHM_s-def"><a name="L923"></a><tt class="py-lineno"> 923</tt> <a class="py-toggle" href="#" id="FWHM_s-toggle" onclick="return toggle('FWHM_s');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#FWHM_s">FWHM_s</a><tt class="py-op">(</tt><tt class="py-param">gaussStddev</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="FWHM_s-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="FWHM_s-expanded"><a name="L924"></a><tt class="py-lineno"> 924</tt>  <tt class="py-line">    <tt class="py-docstring">"""returns Full-Width-Half-Max for gaussian distributions</tt> </tt>
<a name="L925"></a><tt class="py-lineno"> 925</tt>  <tt class="py-line"><tt class="py-docstring">    gaussStddev is the stddev of arr"""</tt> </tt>
<a name="L926"></a><tt class="py-lineno"> 926</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-228" class="py-name"><a title="Priithon.useful._FWHM_over_gaussStddev" class="py-name" href="#" onclick="return doclink('link-228', '_FWHM_over_gaussStddev', 'link-222');">_FWHM_over_gaussStddev</a></tt> <tt class="py-op">*</tt> <tt class="py-name">gaussStddev</tt> </tt>
</div><a name="L927"></a><tt class="py-lineno"> 927</tt>  <tt class="py-line"> </tt>
<a name="L928"></a><tt class="py-lineno"> 928</tt>  <tt class="py-line"><tt id="link-229" class="py-name" targets="Variable Priithon.useful._pi_over_180=Priithon.useful-module.html#_pi_over_180"><a title="Priithon.useful._pi_over_180" class="py-name" href="#" onclick="return doclink('link-229', '_pi_over_180', 'link-229');">_pi_over_180</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-230" class="py-name" targets="Variable Priithon.mandel.pi=Priithon.mandel-module.html#pi,Variable Priithon.plt.interface.pi=Priithon.plt.interface-module.html#pi,Variable Priithon.plt.pi=Priithon.plt-module.html#pi,Variable Priithon.plt.plot_objects.pi=Priithon.plt.plot_objects-module.html#pi,Variable Priithon.plt.plot_utility.pi=Priithon.plt.plot_utility-module.html#pi,Variable Priithon.plt.wxplt.pi=Priithon.plt.wxplt-module.html#pi"><a title="Priithon.mandel.pi
Priithon.plt.interface.pi
Priithon.plt.pi
Priithon.plt.plot_objects.pi
Priithon.plt.plot_utility.pi
Priithon.plt.wxplt.pi" class="py-name" href="#" onclick="return doclink('link-230', 'pi', 'link-230');">pi</a></tt><tt class="py-op">/</tt><tt class="py-number">180.</tt> </tt>
<a name="deg2rad"></a><div id="deg2rad-def"><a name="L929"></a><tt class="py-lineno"> 929</tt> <a class="py-toggle" href="#" id="deg2rad-toggle" onclick="return toggle('deg2rad');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#deg2rad">deg2rad</a><tt class="py-op">(</tt><tt class="py-param">angle</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="deg2rad-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="deg2rad-expanded"><a name="L930"></a><tt class="py-lineno"> 930</tt>  <tt class="py-line">    <tt class="py-docstring">"""return angle(given in degree) converted to randians"""</tt> </tt>
<a name="L931"></a><tt class="py-lineno"> 931</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">angle</tt> <tt class="py-op">*</tt> <tt id="link-231" class="py-name"><a title="Priithon.useful._pi_over_180" class="py-name" href="#" onclick="return doclink('link-231', '_pi_over_180', 'link-229');">_pi_over_180</a></tt> </tt>
</div><a name="rad2deg"></a><div id="rad2deg-def"><a name="L932"></a><tt class="py-lineno"> 932</tt> <a class="py-toggle" href="#" id="rad2deg-toggle" onclick="return toggle('rad2deg');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#rad2deg">rad2deg</a><tt class="py-op">(</tt><tt class="py-param">angle</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="rad2deg-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="rad2deg-expanded"><a name="L933"></a><tt class="py-lineno"> 933</tt>  <tt class="py-line">    <tt class="py-docstring">"""return angle(given in randians) converted to degree"""</tt> </tt>
<a name="L934"></a><tt class="py-lineno"> 934</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">angle</tt> <tt class="py-op">/</tt> <tt id="link-232" class="py-name"><a title="Priithon.useful._pi_over_180" class="py-name" href="#" onclick="return doclink('link-232', '_pi_over_180', 'link-229');">_pi_over_180</a></tt> </tt>
</div><a name="L935"></a><tt class="py-lineno"> 935</tt>  <tt class="py-line"> </tt>
<a name="L936"></a><tt class="py-lineno"> 936</tt>  <tt class="py-line"> </tt>
<a name="mm"></a><div id="mm-def"><a name="L937"></a><tt class="py-lineno"> 937</tt> <a class="py-toggle" href="#" id="mm-toggle" onclick="return toggle('mm');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#mm">mm</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="mm-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="mm-expanded"><a name="L938"></a><tt class="py-lineno"> 938</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L939"></a><tt class="py-lineno"> 939</tt>  <tt class="py-line"><tt class="py-docstring">    returns min,max of arr</tt> </tt>
<a name="L940"></a><tt class="py-lineno"> 940</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L941"></a><tt class="py-lineno"> 941</tt>  <tt class="py-line"> </tt>
<a name="L942"></a><tt class="py-lineno"> 942</tt>  <tt class="py-line">    <tt id="link-233" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-233', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-234" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-234', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L943"></a><tt class="py-lineno"> 943</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-235" class="py-name" targets="Variable Priithon.mandel.minimum=Priithon.mandel-module.html#minimum,Variable Priithon.plt.interface.minimum=Priithon.plt.interface-module.html#minimum,Variable Priithon.plt.minimum=Priithon.plt-module.html#minimum,Variable Priithon.plt.plot_objects.minimum=Priithon.plt.plot_objects-module.html#minimum,Variable Priithon.plt.plot_utility.minimum=Priithon.plt.plot_utility-module.html#minimum,Variable Priithon.plt.wxplt.minimum=Priithon.plt.wxplt-module.html#minimum"><a title="Priithon.mandel.minimum
Priithon.plt.interface.minimum
Priithon.plt.minimum
Priithon.plt.plot_objects.minimum
Priithon.plt.plot_utility.minimum
Priithon.plt.wxplt.minimum" class="py-name" href="#" onclick="return doclink('link-235', 'minimum', 'link-235');">minimum</a></tt><tt class="py-op">.</tt><tt class="py-name">reduce</tt><tt class="py-op">(</tt><tt id="link-236" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-236', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt class="py-name">flat</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-237" class="py-name" targets="Variable Priithon.mandel.maximum=Priithon.mandel-module.html#maximum,Variable Priithon.plt.interface.maximum=Priithon.plt.interface-module.html#maximum,Variable Priithon.plt.maximum=Priithon.plt-module.html#maximum,Variable Priithon.plt.plot_objects.maximum=Priithon.plt.plot_objects-module.html#maximum,Variable Priithon.plt.plot_utility.maximum=Priithon.plt.plot_utility-module.html#maximum,Variable Priithon.plt.wxplt.maximum=Priithon.plt.wxplt-module.html#maximum"><a title="Priithon.mandel.maximum
Priithon.plt.interface.maximum
Priithon.plt.maximum
Priithon.plt.plot_objects.maximum
Priithon.plt.plot_utility.maximum
Priithon.plt.wxplt.maximum" class="py-name" href="#" onclick="return doclink('link-237', 'maximum', 'link-237');">maximum</a></tt><tt class="py-op">.</tt><tt class="py-name">reduce</tt><tt class="py-op">(</tt><tt id="link-238" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-238', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt class="py-name">flat</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L944"></a><tt class="py-lineno"> 944</tt>  <tt class="py-line"> </tt>
<a name="mmm"></a><div id="mmm-def"><a name="L945"></a><tt class="py-lineno"> 945</tt> <a class="py-toggle" href="#" id="mmm-toggle" onclick="return toggle('mmm');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#mmm">mmm</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="mmm-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="mmm-expanded"><a name="L946"></a><tt class="py-lineno"> 946</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L947"></a><tt class="py-lineno"> 947</tt>  <tt class="py-line"><tt class="py-docstring">    returns min,max,mean of arr</tt> </tt>
<a name="L948"></a><tt class="py-lineno"> 948</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L949"></a><tt class="py-lineno"> 949</tt>  <tt class="py-line">    <tt id="link-239" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-239', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-240" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-240', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt id="link-241" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-241', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L950"></a><tt class="py-lineno"> 950</tt>  <tt class="py-line">    <tt class="py-comment">#TODO: make nice for memmap</tt> </tt>
<a name="L951"></a><tt class="py-lineno"> 951</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">m</tt> <tt class="py-op">=</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-242" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-242', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt><tt id="link-243" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-243', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L952"></a><tt class="py-lineno"> 952</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-244" class="py-name"><a title="Priithon.mandel.minimum
Priithon.plt.interface.minimum
Priithon.plt.minimum
Priithon.plt.plot_objects.minimum
Priithon.plt.plot_utility.minimum
Priithon.plt.wxplt.minimum" class="py-name" href="#" onclick="return doclink('link-244', 'minimum', 'link-235');">minimum</a></tt><tt class="py-op">.</tt><tt class="py-name">reduce</tt><tt class="py-op">(</tt><tt id="link-245" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-245', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt class="py-name">flat</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-246" class="py-name"><a title="Priithon.mandel.maximum
Priithon.plt.interface.maximum
Priithon.plt.maximum
Priithon.plt.plot_objects.maximum
Priithon.plt.plot_utility.maximum
Priithon.plt.wxplt.maximum" class="py-name" href="#" onclick="return doclink('link-246', 'maximum', 'link-237');">maximum</a></tt><tt class="py-op">.</tt><tt class="py-name">reduce</tt><tt class="py-op">(</tt><tt id="link-247" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-247', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt class="py-name">flat</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">m</tt><tt class="py-op">)</tt> </tt>
</div><a name="L953"></a><tt class="py-lineno"> 953</tt>  <tt class="py-line"> </tt>
<a name="mmms"></a><div id="mmms-def"><a name="L954"></a><tt class="py-lineno"> 954</tt> <a class="py-toggle" href="#" id="mmms-toggle" onclick="return toggle('mmms');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#mmms">mmms</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="mmms-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="mmms-expanded"><a name="L955"></a><tt class="py-lineno"> 955</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L956"></a><tt class="py-lineno"> 956</tt>  <tt class="py-line"><tt class="py-docstring">    returns min,max,mean,stddev of arr</tt> </tt>
<a name="L957"></a><tt class="py-lineno"> 957</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L958"></a><tt class="py-lineno"> 958</tt>  <tt class="py-line">    <tt id="link-248" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-248', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-249" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-249', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt id="link-250" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-250', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L959"></a><tt class="py-lineno"> 959</tt>  <tt class="py-line">    <tt class="py-comment">#TODO: make nice for memmap</tt> </tt>
<a name="L960"></a><tt class="py-lineno"> 960</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">mi</tt><tt class="py-op">,</tt><tt class="py-name">ma</tt><tt class="py-op">,</tt><tt class="py-name">me</tt><tt class="py-op">,</tt><tt class="py-name">st</tt> <tt class="py-op">=</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-251" class="py-name"><a title="Priithon.useful.mmms" class="py-name" href="#" onclick="return doclink('link-251', 'mmms', 'link-61');">mmms</a></tt><tt class="py-op">(</tt> <tt id="link-252" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-252', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">)</tt> </tt>
<a name="L961"></a><tt class="py-lineno"> 961</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">mi</tt><tt class="py-op">,</tt><tt class="py-name">ma</tt><tt class="py-op">,</tt><tt class="py-name">me</tt><tt class="py-op">,</tt><tt class="py-name">st</tt><tt class="py-op">)</tt> </tt>
</div><a name="L962"></a><tt class="py-lineno"> 962</tt>  <tt class="py-line"> </tt>
<a name="mean2d"></a><div id="mean2d-def"><a name="L963"></a><tt class="py-lineno"> 963</tt> <a class="py-toggle" href="#" id="mean2d-toggle" onclick="return toggle('mean2d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#mean2d">mean2d</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">outtype</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float32</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="mean2d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="mean2d-expanded"><a name="L964"></a><tt class="py-lineno"> 964</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L965"></a><tt class="py-lineno"> 965</tt>  <tt class="py-line"><tt class="py-docstring">    returns an array of shape arr.shape[:-2] and dtype outtype</tt> </tt>
<a name="L966"></a><tt class="py-lineno"> 966</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L967"></a><tt class="py-lineno"> 967</tt>  <tt class="py-line">    <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-253" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-253', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt id="link-254" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-254', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-255" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-255', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-256" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-256', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">outtype</tt><tt class="py-op">)</tt> </tt>
<a name="L968"></a><tt class="py-lineno"> 968</tt>  <tt class="py-line">    <tt class="py-name">bb</tt> <tt class="py-op">=</tt> <tt class="py-name">b</tt><tt class="py-op">.</tt><tt id="link-257" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-257', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L969"></a><tt class="py-lineno"> 969</tt>  <tt class="py-line">    <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-258" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-258', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> </tt>
<a name="L970"></a><tt class="py-lineno"> 970</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt> <tt class="py-op">=</tt> <tt id="link-259" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-259', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-260" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-260', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L971"></a><tt class="py-lineno"> 971</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt><tt class="py-op">.</tt><tt id="link-261" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-261', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt id="link-262" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-262', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-263" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-263', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L972"></a><tt class="py-lineno"> 972</tt>  <tt class="py-line"> </tt>
<a name="L973"></a><tt class="py-lineno"> 973</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-264" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-264', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-265" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-265', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt> <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-266" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-266', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L974"></a><tt class="py-lineno"> 974</tt>  <tt class="py-line">        <tt class="py-comment">#bb[i] = S.mean( aarr[i] )</tt> </tt>
<a name="L975"></a><tt class="py-lineno"> 975</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-name">bb</tt><tt class="py-op">[</tt><tt id="link-267" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-267', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt id="link-268" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-268', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-269" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-269', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L976"></a><tt class="py-lineno"> 976</tt>  <tt class="py-line"> </tt>
<a name="L977"></a><tt class="py-lineno"> 977</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt> </tt>
</div><a name="L978"></a><tt class="py-lineno"> 978</tt>  <tt class="py-line"> </tt>
<a name="max2d"></a><div id="max2d-def"><a name="L979"></a><tt class="py-lineno"> 979</tt> <a class="py-toggle" href="#" id="max2d-toggle" onclick="return toggle('max2d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#max2d">max2d</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">outtype</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="max2d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="max2d-expanded"><a name="L980"></a><tt class="py-lineno"> 980</tt>  <tt class="py-line">    <tt class="py-docstring">"""returns an array of shape arr.shape[:-2] and dtype outtype</tt> </tt>
<a name="L981"></a><tt class="py-lineno"> 981</tt>  <tt class="py-line"><tt class="py-docstring">    if outtype=None it uses arr.dtype</tt> </tt>
<a name="L982"></a><tt class="py-lineno"> 982</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L983"></a><tt class="py-lineno"> 983</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">outtype</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L984"></a><tt class="py-lineno"> 984</tt>  <tt class="py-line">        <tt class="py-name">outtype</tt> <tt class="py-op">=</tt> <tt id="link-270" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-270', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-271" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-271', 'dtype', 'link-19');">dtype</a></tt> </tt>
<a name="L985"></a><tt class="py-lineno"> 985</tt>  <tt class="py-line"> </tt>
<a name="L986"></a><tt class="py-lineno"> 986</tt>  <tt class="py-line">    <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-272" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-272', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt id="link-273" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-273', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-274" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-274', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-275" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-275', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">outtype</tt><tt class="py-op">)</tt> </tt>
<a name="L987"></a><tt class="py-lineno"> 987</tt>  <tt class="py-line">    <tt class="py-name">bb</tt> <tt class="py-op">=</tt> <tt class="py-name">b</tt><tt class="py-op">.</tt><tt id="link-276" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-276', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L988"></a><tt class="py-lineno"> 988</tt>  <tt class="py-line">    <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-277" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-277', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> </tt>
<a name="L989"></a><tt class="py-lineno"> 989</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt> <tt class="py-op">=</tt> <tt id="link-278" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-278', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-279" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-279', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L990"></a><tt class="py-lineno"> 990</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt><tt class="py-op">.</tt><tt id="link-280" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-280', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt id="link-281" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-281', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-282" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-282', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L991"></a><tt class="py-lineno"> 991</tt>  <tt class="py-line"> </tt>
<a name="L992"></a><tt class="py-lineno"> 992</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-283" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-283', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-284" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-284', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt> <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-285" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-285', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L993"></a><tt class="py-lineno"> 993</tt>  <tt class="py-line">        <tt class="py-name">bb</tt><tt class="py-op">[</tt><tt id="link-286" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-286', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt id="link-287" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-287', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-288" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-288', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L994"></a><tt class="py-lineno"> 994</tt>  <tt class="py-line"> </tt>
<a name="L995"></a><tt class="py-lineno"> 995</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt> </tt>
</div><a name="min2d"></a><div id="min2d-def"><a name="L996"></a><tt class="py-lineno"> 996</tt> <a class="py-toggle" href="#" id="min2d-toggle" onclick="return toggle('min2d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#min2d">min2d</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">outtype</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="min2d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="min2d-expanded"><a name="L997"></a><tt class="py-lineno"> 997</tt>  <tt class="py-line">    <tt class="py-docstring">"""returns an array of shape arr.shape[:-2] and dtype outtype</tt> </tt>
<a name="L998"></a><tt class="py-lineno"> 998</tt>  <tt class="py-line"><tt class="py-docstring">    if outtype=None it uses arr.dtype</tt> </tt>
<a name="L999"></a><tt class="py-lineno"> 999</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1000"></a><tt class="py-lineno">1000</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">outtype</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1001"></a><tt class="py-lineno">1001</tt>  <tt class="py-line">        <tt class="py-name">outtype</tt> <tt class="py-op">=</tt> <tt id="link-289" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-289', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-290" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-290', 'dtype', 'link-19');">dtype</a></tt> </tt>
<a name="L1002"></a><tt class="py-lineno">1002</tt>  <tt class="py-line"> </tt>
<a name="L1003"></a><tt class="py-lineno">1003</tt>  <tt class="py-line">    <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-291" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-291', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt id="link-292" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-292', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-293" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-293', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-294" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-294', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">outtype</tt><tt class="py-op">)</tt> </tt>
<a name="L1004"></a><tt class="py-lineno">1004</tt>  <tt class="py-line">    <tt class="py-name">bb</tt> <tt class="py-op">=</tt> <tt class="py-name">b</tt><tt class="py-op">.</tt><tt id="link-295" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-295', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1005"></a><tt class="py-lineno">1005</tt>  <tt class="py-line">    <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-296" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-296', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> </tt>
<a name="L1006"></a><tt class="py-lineno">1006</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt> <tt class="py-op">=</tt> <tt id="link-297" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-297', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-298" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-298', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1007"></a><tt class="py-lineno">1007</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt><tt class="py-op">.</tt><tt id="link-299" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-299', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt id="link-300" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-300', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-301" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-301', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L1008"></a><tt class="py-lineno">1008</tt>  <tt class="py-line"> </tt>
<a name="L1009"></a><tt class="py-lineno">1009</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-302" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-302', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-303" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-303', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt> <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-304" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-304', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1010"></a><tt class="py-lineno">1010</tt>  <tt class="py-line">        <tt class="py-name">bb</tt><tt class="py-op">[</tt><tt id="link-305" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-305', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt id="link-306" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-306', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-307" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-307', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1011"></a><tt class="py-lineno">1011</tt>  <tt class="py-line"> </tt>
<a name="L1012"></a><tt class="py-lineno">1012</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt> </tt>
</div><a name="L1013"></a><tt class="py-lineno">1013</tt>  <tt class="py-line"> </tt>
<a name="mmm2d"></a><div id="mmm2d-def"><a name="L1014"></a><tt class="py-lineno">1014</tt> <a class="py-toggle" href="#" id="mmm2d-toggle" onclick="return toggle('mmm2d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#mmm2d">mmm2d</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">outtype</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="mmm2d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="mmm2d-expanded"><a name="L1015"></a><tt class="py-lineno">1015</tt>  <tt class="py-line">    <tt class="py-docstring">"""min-max-mean: returns an array of shape (3,)+arr.shape[:-2] and dtype outtype</tt> </tt>
<a name="L1016"></a><tt class="py-lineno">1016</tt>  <tt class="py-line"><tt class="py-docstring">    if outtype=None it uses arr.dtype</tt> </tt>
<a name="L1017"></a><tt class="py-lineno">1017</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1018"></a><tt class="py-lineno">1018</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">outtype</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1019"></a><tt class="py-lineno">1019</tt>  <tt class="py-line">        <tt class="py-name">outtype</tt> <tt class="py-op">=</tt> <tt id="link-308" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-308', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-309" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-309', 'dtype', 'link-19');">dtype</a></tt> </tt>
<a name="L1020"></a><tt class="py-lineno">1020</tt>  <tt class="py-line"> </tt>
<a name="L1021"></a><tt class="py-lineno">1021</tt>  <tt class="py-line">    <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-310" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-310', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">3</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt id="link-311" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-311', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-312" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-312', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-313" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-313', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">outtype</tt><tt class="py-op">)</tt> </tt>
<a name="L1022"></a><tt class="py-lineno">1022</tt>  <tt class="py-line">    <tt class="py-name">bb</tt> <tt class="py-op">=</tt> <tt class="py-name">b</tt><tt class="py-op">.</tt><tt id="link-314" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-314', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1023"></a><tt class="py-lineno">1023</tt>  <tt class="py-line">    <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-315" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-315', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-number">3</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1024"></a><tt class="py-lineno">1024</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt> <tt class="py-op">=</tt> <tt id="link-316" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-316', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-317" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-317', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1025"></a><tt class="py-lineno">1025</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt><tt class="py-op">.</tt><tt id="link-318" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-318', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt id="link-319" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-319', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-320" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-320', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L1026"></a><tt class="py-lineno">1026</tt>  <tt class="py-line"> </tt>
<a name="L1027"></a><tt class="py-lineno">1027</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-321" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-321', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-322" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-322', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt> <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-323" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-323', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1028"></a><tt class="py-lineno">1028</tt>  <tt class="py-line">        <tt id="link-324" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-324', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-325" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-325', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt id="link-326" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-326', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1029"></a><tt class="py-lineno">1029</tt>  <tt class="py-line"> </tt>
<a name="L1030"></a><tt class="py-lineno">1030</tt>  <tt class="py-line">        <tt class="py-name">bb</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">,</tt> <tt id="link-327" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-327', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-328" class="py-name" targets="Function Priithon.useful.mmm()=Priithon.useful-module.html#mmm"><a title="Priithon.useful.mmm" class="py-name" href="#" onclick="return doclink('link-328', 'mmm', 'link-328');">mmm</a></tt><tt class="py-op">(</tt> <tt class="py-name">aar</tt> <tt class="py-op">)</tt> </tt>
<a name="L1031"></a><tt class="py-lineno">1031</tt>  <tt class="py-line"> </tt>
<a name="L1032"></a><tt class="py-lineno">1032</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt> </tt>
</div><a name="L1033"></a><tt class="py-lineno">1033</tt>  <tt class="py-line"> </tt>
<a name="mmms2d"></a><div id="mmms2d-def"><a name="L1034"></a><tt class="py-lineno">1034</tt> <a class="py-toggle" href="#" id="mmms2d-toggle" onclick="return toggle('mmms2d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#mmms2d">mmms2d</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">outtype</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float32</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="mmms2d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="mmms2d-expanded"><a name="L1035"></a><tt class="py-lineno">1035</tt>  <tt class="py-line">    <tt class="py-docstring">"""min-max-mean-stddev: returns an array of shape (4,)+arr.shape[:-2] and dtype outtype</tt> </tt>
<a name="L1036"></a><tt class="py-lineno">1036</tt>  <tt class="py-line"><tt class="py-docstring">    if outtype=None it uses arr.dtype</tt> </tt>
<a name="L1037"></a><tt class="py-lineno">1037</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1038"></a><tt class="py-lineno">1038</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">outtype</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1039"></a><tt class="py-lineno">1039</tt>  <tt class="py-line">        <tt class="py-name">outtype</tt> <tt class="py-op">=</tt> <tt id="link-329" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-329', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-330" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-330', 'dtype', 'link-19');">dtype</a></tt> </tt>
<a name="L1040"></a><tt class="py-lineno">1040</tt>  <tt class="py-line"> </tt>
<a name="L1041"></a><tt class="py-lineno">1041</tt>  <tt class="py-line">    <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-331" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-331', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">4</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt id="link-332" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-332', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-333" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-333', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-334" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-334', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">outtype</tt><tt class="py-op">)</tt> </tt>
<a name="L1042"></a><tt class="py-lineno">1042</tt>  <tt class="py-line">    <tt class="py-name">bb</tt> <tt class="py-op">=</tt> <tt class="py-name">b</tt><tt class="py-op">.</tt><tt id="link-335" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-335', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1043"></a><tt class="py-lineno">1043</tt>  <tt class="py-line">    <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-336" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-336', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-number">4</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1044"></a><tt class="py-lineno">1044</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt> <tt class="py-op">=</tt> <tt id="link-337" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-337', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-338" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-338', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1045"></a><tt class="py-lineno">1045</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt><tt class="py-op">.</tt><tt id="link-339" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-339', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt id="link-340" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-340', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-341" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-341', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L1046"></a><tt class="py-lineno">1046</tt>  <tt class="py-line"> </tt>
<a name="L1047"></a><tt class="py-lineno">1047</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-342" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-342', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-343" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-343', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt> <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-344" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-344', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1048"></a><tt class="py-lineno">1048</tt>  <tt class="py-line">        <tt id="link-345" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-345', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-346" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-346', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt id="link-347" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-347', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1049"></a><tt class="py-lineno">1049</tt>  <tt class="py-line">        <tt class="py-name">bb</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">,</tt> <tt id="link-348" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-348', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-349" class="py-name"><a title="Priithon.useful.mmms" class="py-name" href="#" onclick="return doclink('link-349', 'mmms', 'link-61');">mmms</a></tt><tt class="py-op">(</tt> <tt id="link-350" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-350', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">)</tt> </tt>
<a name="L1050"></a><tt class="py-lineno">1050</tt>  <tt class="py-line"> </tt>
<a name="L1051"></a><tt class="py-lineno">1051</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt> </tt>
</div><a name="L1052"></a><tt class="py-lineno">1052</tt>  <tt class="py-line"> </tt>
<a name="mm2d"></a><div id="mm2d-def"><a name="L1053"></a><tt class="py-lineno">1053</tt> <a class="py-toggle" href="#" id="mm2d-toggle" onclick="return toggle('mm2d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#mm2d">mm2d</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">outtype</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="mm2d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="mm2d-expanded"><a name="L1054"></a><tt class="py-lineno">1054</tt>  <tt class="py-line">    <tt class="py-docstring">"""min-max: returns an array of shape (2,)+arr.shape[:-2] and dtype outtype</tt> </tt>
<a name="L1055"></a><tt class="py-lineno">1055</tt>  <tt class="py-line"><tt class="py-docstring">    if outtype=None it uses arr.dtype</tt> </tt>
<a name="L1056"></a><tt class="py-lineno">1056</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1057"></a><tt class="py-lineno">1057</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">outtype</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1058"></a><tt class="py-lineno">1058</tt>  <tt class="py-line">        <tt class="py-name">outtype</tt> <tt class="py-op">=</tt> <tt id="link-351" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-351', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-352" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-352', 'dtype', 'link-19');">dtype</a></tt> </tt>
<a name="L1059"></a><tt class="py-lineno">1059</tt>  <tt class="py-line"> </tt>
<a name="L1060"></a><tt class="py-lineno">1060</tt>  <tt class="py-line">    <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-353" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-353', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt id="link-354" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-354', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-355" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-355', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-356" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-356', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">outtype</tt><tt class="py-op">)</tt> </tt>
<a name="L1061"></a><tt class="py-lineno">1061</tt>  <tt class="py-line">    <tt class="py-name">bb</tt> <tt class="py-op">=</tt> <tt class="py-name">b</tt><tt class="py-op">.</tt><tt id="link-357" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-357', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1062"></a><tt class="py-lineno">1062</tt>  <tt class="py-line">    <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-358" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-358', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-number">2</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1063"></a><tt class="py-lineno">1063</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt> <tt class="py-op">=</tt> <tt id="link-359" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-359', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-360" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-360', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1064"></a><tt class="py-lineno">1064</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt><tt class="py-op">.</tt><tt id="link-361" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-361', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt id="link-362" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-362', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-363" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-363', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L1065"></a><tt class="py-lineno">1065</tt>  <tt class="py-line"> </tt>
<a name="L1066"></a><tt class="py-lineno">1066</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-364" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-364', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-365" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-365', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt> <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-366" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-366', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1067"></a><tt class="py-lineno">1067</tt>  <tt class="py-line">        <tt class="py-name">bb</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt id="link-367" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-367', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt id="link-368" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-368', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-369" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-369', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1068"></a><tt class="py-lineno">1068</tt>  <tt class="py-line">        <tt class="py-name">bb</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt id="link-370" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-370', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt id="link-371" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-371', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-372" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-372', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1069"></a><tt class="py-lineno">1069</tt>  <tt class="py-line"> </tt>
<a name="L1070"></a><tt class="py-lineno">1070</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt> </tt>
</div><a name="median2d"></a><div id="median2d-def"><a name="L1071"></a><tt class="py-lineno">1071</tt> <a class="py-toggle" href="#" id="median2d-toggle" onclick="return toggle('median2d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#median2d">median2d</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">outtype</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="median2d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="median2d-expanded"><a name="L1072"></a><tt class="py-lineno">1072</tt>  <tt class="py-line">    <tt class="py-docstring">"""median per 2d section</tt> </tt>
<a name="L1073"></a><tt class="py-lineno">1073</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1074"></a><tt class="py-lineno">1074</tt>  <tt class="py-line"><tt class="py-docstring">    returns an array of shape arr.shape[:-2] and dtype outtype</tt> </tt>
<a name="L1075"></a><tt class="py-lineno">1075</tt>  <tt class="py-line"><tt class="py-docstring">    if outtype=None it uses arr.dtype</tt> </tt>
<a name="L1076"></a><tt class="py-lineno">1076</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1077"></a><tt class="py-lineno">1077</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">outtype</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1078"></a><tt class="py-lineno">1078</tt>  <tt class="py-line">        <tt class="py-name">outtype</tt> <tt class="py-op">=</tt> <tt id="link-373" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-373', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-374" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-374', 'dtype', 'link-19');">dtype</a></tt> </tt>
<a name="L1079"></a><tt class="py-lineno">1079</tt>  <tt class="py-line"> </tt>
<a name="L1080"></a><tt class="py-lineno">1080</tt>  <tt class="py-line">    <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-375" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-375', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt id="link-376" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-376', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-377" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-377', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-378" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-378', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">outtype</tt><tt class="py-op">)</tt> </tt>
<a name="L1081"></a><tt class="py-lineno">1081</tt>  <tt class="py-line">    <tt class="py-name">bb</tt> <tt class="py-op">=</tt> <tt class="py-name">b</tt><tt class="py-op">.</tt><tt id="link-379" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-379', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1082"></a><tt class="py-lineno">1082</tt>  <tt class="py-line">    <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-380" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-380', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> </tt>
<a name="L1083"></a><tt class="py-lineno">1083</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt> <tt class="py-op">=</tt> <tt id="link-381" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-381', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-382" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-382', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1084"></a><tt class="py-lineno">1084</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt><tt class="py-op">.</tt><tt id="link-383" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-383', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt id="link-384" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-384', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-385" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-385', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L1085"></a><tt class="py-lineno">1085</tt>  <tt class="py-line"> </tt>
<a name="L1086"></a><tt class="py-lineno">1086</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-386" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-386', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-387" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-387', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt> <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-388" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-388', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1087"></a><tt class="py-lineno">1087</tt>  <tt class="py-line">        <tt id="link-389" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-389', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-390" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-390', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt id="link-391" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-391', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1088"></a><tt class="py-lineno">1088</tt>  <tt class="py-line">        <tt class="py-name">bb</tt><tt class="py-op">[</tt><tt id="link-392" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-392', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-393" class="py-name"><a title="Priithon.useful.median" class="py-name" href="#" onclick="return doclink('link-393', 'median', 'link-207');">median</a></tt><tt class="py-op">(</tt> <tt id="link-394" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-394', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">)</tt> </tt>
<a name="L1089"></a><tt class="py-lineno">1089</tt>  <tt class="py-line"> </tt>
<a name="L1090"></a><tt class="py-lineno">1090</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt> </tt>
</div><a name="median22d"></a><div id="median22d-def"><a name="L1091"></a><tt class="py-lineno">1091</tt> <a class="py-toggle" href="#" id="median22d-toggle" onclick="return toggle('median22d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#median22d">median22d</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">outtype</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="median22d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="median22d-expanded"><a name="L1092"></a><tt class="py-lineno">1092</tt>  <tt class="py-line">    <tt class="py-docstring">"""median2 per 2d section [median is (median,meddev)]</tt> </tt>
<a name="L1093"></a><tt class="py-lineno">1093</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1094"></a><tt class="py-lineno">1094</tt>  <tt class="py-line"><tt class="py-docstring">    returns an array of shape (2,)+arr.shape[:-2] and dtype outtype</tt> </tt>
<a name="L1095"></a><tt class="py-lineno">1095</tt>  <tt class="py-line"><tt class="py-docstring">    if outtype=None it uses arr.dtype</tt> </tt>
<a name="L1096"></a><tt class="py-lineno">1096</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1097"></a><tt class="py-lineno">1097</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">outtype</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1098"></a><tt class="py-lineno">1098</tt>  <tt class="py-line">        <tt class="py-name">outtype</tt> <tt class="py-op">=</tt> <tt id="link-395" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-395', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-396" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-396', 'dtype', 'link-19');">dtype</a></tt> </tt>
<a name="L1099"></a><tt class="py-lineno">1099</tt>  <tt class="py-line"> </tt>
<a name="L1100"></a><tt class="py-lineno">1100</tt>  <tt class="py-line">    <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-397" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-397', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt id="link-398" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-398', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-399" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-399', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-400" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-400', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">outtype</tt><tt class="py-op">)</tt> </tt>
<a name="L1101"></a><tt class="py-lineno">1101</tt>  <tt class="py-line">    <tt class="py-name">bb</tt> <tt class="py-op">=</tt> <tt class="py-name">b</tt><tt class="py-op">.</tt><tt id="link-401" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-401', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1102"></a><tt class="py-lineno">1102</tt>  <tt class="py-line">    <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-402" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-402', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-number">2</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1103"></a><tt class="py-lineno">1103</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt> <tt class="py-op">=</tt> <tt id="link-403" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-403', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-404" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-404', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1104"></a><tt class="py-lineno">1104</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt><tt class="py-op">.</tt><tt id="link-405" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-405', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt id="link-406" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-406', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-407" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-407', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L1105"></a><tt class="py-lineno">1105</tt>  <tt class="py-line"> </tt>
<a name="L1106"></a><tt class="py-lineno">1106</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-408" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-408', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-409" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-409', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt> <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-410" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-410', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1107"></a><tt class="py-lineno">1107</tt>  <tt class="py-line">        <tt id="link-411" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-411', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-412" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-412', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt id="link-413" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-413', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1108"></a><tt class="py-lineno">1108</tt>  <tt class="py-line">        <tt class="py-name">bb</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">,</tt> <tt id="link-414" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-414', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-415" class="py-name"><a title="Priithon.useful.median2" class="py-name" href="#" onclick="return doclink('link-415', 'median2', 'link-212');">median2</a></tt><tt class="py-op">(</tt> <tt id="link-416" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-416', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">)</tt> </tt>
<a name="L1109"></a><tt class="py-lineno">1109</tt>  <tt class="py-line"> </tt>
<a name="L1110"></a><tt class="py-lineno">1110</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt> </tt>
</div><a name="L1111"></a><tt class="py-lineno">1111</tt>  <tt class="py-line"> </tt>
<a name="topPercentile2d"></a><div id="topPercentile2d-def"><a name="L1112"></a><tt class="py-lineno">1112</tt> <a class="py-toggle" href="#" id="topPercentile2d-toggle" onclick="return toggle('topPercentile2d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#topPercentile2d">topPercentile2d</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">percentile</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-param">outtype</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="topPercentile2d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="topPercentile2d-expanded"><a name="L1113"></a><tt class="py-lineno">1113</tt>  <tt class="py-line">    <tt class="py-docstring">"""find Intens. for highest percentile  per section</tt> </tt>
<a name="L1114"></a><tt class="py-lineno">1114</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1115"></a><tt class="py-lineno">1115</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1116"></a><tt class="py-lineno">1116</tt>  <tt class="py-line"><tt class="py-docstring">    returns an array of shape (2,)+arr.shape[:-2] and dtype outtype</tt> </tt>
<a name="L1117"></a><tt class="py-lineno">1117</tt>  <tt class="py-line"><tt class="py-docstring">    if outtype=None it uses arr.dtype</tt> </tt>
<a name="L1118"></a><tt class="py-lineno">1118</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1119"></a><tt class="py-lineno">1119</tt>  <tt class="py-line"><tt class="py-docstring">    slow!! ****** might only work for UInt16 arr *********</tt> </tt>
<a name="L1120"></a><tt class="py-lineno">1120</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1121"></a><tt class="py-lineno">1121</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">outtype</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1122"></a><tt class="py-lineno">1122</tt>  <tt class="py-line">        <tt class="py-name">outtype</tt> <tt class="py-op">=</tt> <tt id="link-417" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-417', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-418" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-418', 'dtype', 'link-19');">dtype</a></tt> </tt>
<a name="L1123"></a><tt class="py-lineno">1123</tt>  <tt class="py-line"> </tt>
<a name="L1124"></a><tt class="py-lineno">1124</tt>  <tt class="py-line">    <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-419" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-419', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt id="link-420" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-420', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-421" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-421', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-422" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-422', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">outtype</tt><tt class="py-op">)</tt> </tt>
<a name="L1125"></a><tt class="py-lineno">1125</tt>  <tt class="py-line">    <tt class="py-name">bb</tt> <tt class="py-op">=</tt> <tt class="py-name">b</tt><tt class="py-op">.</tt><tt id="link-423" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-423', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1126"></a><tt class="py-lineno">1126</tt>  <tt class="py-line">    <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-424" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-424', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> </tt>
<a name="L1127"></a><tt class="py-lineno">1127</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt> <tt class="py-op">=</tt> <tt id="link-425" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-425', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-426" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-426', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1128"></a><tt class="py-lineno">1128</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt><tt class="py-op">.</tt><tt id="link-427" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-427', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt id="link-428" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-428', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-429" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-429', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L1129"></a><tt class="py-lineno">1129</tt>  <tt class="py-line"> </tt>
<a name="L1130"></a><tt class="py-lineno">1130</tt>  <tt class="py-line">    <tt id="link-430" class="py-name" targets="Function Priithon.histogram.hist()=Priithon.histogram-module.html#hist"><a title="Priithon.histogram.hist" class="py-name" href="#" onclick="return doclink('link-430', 'hist', 'link-430');">hist</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt> <tt id="link-431" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-431', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">&lt;&lt;</tt><tt class="py-number">16</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-432" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-432', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">int32</tt> <tt class="py-op">)</tt> </tt>
<a name="L1131"></a><tt class="py-lineno">1131</tt>  <tt class="py-line">    <tt class="py-name">nPix</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">prod</tt><tt class="py-op">(</tt> <tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-433" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-433', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">)</tt> </tt>
<a name="L1132"></a><tt class="py-lineno">1132</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-434" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-434', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-435" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-435', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt> <tt class="py-name">bb</tt><tt class="py-op">.</tt><tt id="link-436" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-436', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1133"></a><tt class="py-lineno">1133</tt>  <tt class="py-line">        <tt id="link-437" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-437', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-438" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-438', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt id="link-439" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-439', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1134"></a><tt class="py-lineno">1134</tt>  <tt class="py-line"> </tt>
<a name="L1135"></a><tt class="py-lineno">1135</tt>  <tt class="py-line">        <tt class="py-op">(</tt><tt class="py-name">mi</tt><tt class="py-op">,</tt><tt class="py-name">ma</tt><tt class="py-op">,</tt><tt id="link-440" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-440', 'mean', 'link-217');">mean</a></tt><tt class="py-op">,</tt><tt id="link-441" class="py-name"><a title="Priithon.useful.stddev" class="py-name" href="#" onclick="return doclink('link-441', 'stddev', 'link-226');">stddev</a></tt><tt class="py-op">)</tt> <tt class="py-op">=</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt class="py-name">histogram2</tt><tt class="py-op">(</tt><tt id="link-442" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-442', 'arr', 'link-41');">arr</a></tt><tt class="py-op">,</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">&lt;&lt;</tt><tt class="py-number">16</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-443" class="py-name"><a title="Priithon.histogram.hist" class="py-name" href="#" onclick="return doclink('link-443', 'hist', 'link-430');">hist</a></tt><tt class="py-op">)</tt> </tt>
<a name="L1136"></a><tt class="py-lineno">1136</tt>  <tt class="py-line">        <tt class="py-name">ma</tt> <tt class="py-op">=</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">ma</tt><tt class="py-op">)</tt> </tt>
<a name="L1137"></a><tt class="py-lineno">1137</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">ma</tt> <tt class="py-op">&gt;=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-444" class="py-name"><a title="Priithon.histogram.hist" class="py-name" href="#" onclick="return doclink('link-444', 'hist', 'link-430');">hist</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1138"></a><tt class="py-lineno">1138</tt>  <tt class="py-line">            <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"U.topPercentile() works only for img values &lt; 65536"</tt> </tt>
<a name="L1139"></a><tt class="py-lineno">1139</tt>  <tt class="py-line">        <tt class="py-name">tp</tt> <tt class="py-op">=</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt class="py-name">toppercentile</tt><tt class="py-op">(</tt><tt id="link-445" class="py-name"><a title="Priithon.histogram.hist" class="py-name" href="#" onclick="return doclink('link-445', 'hist', 'link-430');">hist</a></tt><tt class="py-op">,</tt> <tt class="py-name">nPix</tt><tt class="py-op">,</tt> <tt class="py-name">ma</tt><tt class="py-op">,</tt> <tt class="py-name">percentile</tt><tt class="py-op">)</tt> </tt>
<a name="L1140"></a><tt class="py-lineno">1140</tt>  <tt class="py-line">        <tt class="py-name">bb</tt><tt class="py-op">[</tt><tt id="link-446" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-446', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">tp</tt> </tt>
<a name="L1141"></a><tt class="py-lineno">1141</tt>  <tt class="py-line"> </tt>
<a name="L1142"></a><tt class="py-lineno">1142</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt> </tt>
</div><a name="L1143"></a><tt class="py-lineno">1143</tt>  <tt class="py-line"> </tt>
<a name="L1144"></a><tt class="py-lineno">1144</tt>  <tt class="py-line"> </tt>
<a name="fitLine"></a><div id="fitLine-def"><a name="L1145"></a><tt class="py-lineno">1145</tt> <a class="py-toggle" href="#" id="fitLine-toggle" onclick="return toggle('fitLine');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#fitLine">fitLine</a><tt class="py-op">(</tt><tt class="py-param">yy</tt><tt class="py-op">,</tt><tt class="py-param">xx</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="fitLine-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="fitLine-expanded"><a name="L1146"></a><tt class="py-lineno">1146</tt>  <tt class="py-line">    <tt class="py-docstring">"""returns (a,b, yDeltaSumPerVal) for least-sqare-fit of axx(i) + b = yy(i)</tt> </tt>
<a name="L1147"></a><tt class="py-lineno">1147</tt>  <tt class="py-line"><tt class="py-docstring">    yDeltaSumPerVal= sum[(axx+ b - yy)**2] **.5 / numPoints</tt> </tt>
<a name="L1148"></a><tt class="py-lineno">1148</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1149"></a><tt class="py-lineno">1149</tt>  <tt class="py-line"><tt class="py-docstring">    if xx is None it defaults to 0,1,2,3,4,...</tt> </tt>
<a name="L1150"></a><tt class="py-lineno">1150</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1151"></a><tt class="py-lineno">1151</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">xx</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1152"></a><tt class="py-lineno">1152</tt>  <tt class="py-line">       <tt class="py-name">xx</tt><tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">arange</tt><tt class="py-op">(</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">yy</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L1153"></a><tt class="py-lineno">1153</tt>  <tt class="py-line">     </tt>
<a name="L1154"></a><tt class="py-lineno">1154</tt>  <tt class="py-line">    <tt class="py-name">xm</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-447" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-447', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt><tt class="py-name">xx</tt><tt class="py-op">)</tt> </tt>
<a name="L1155"></a><tt class="py-lineno">1155</tt>  <tt class="py-line">    <tt class="py-name">ym</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-448" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-448', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt><tt class="py-name">yy</tt><tt class="py-op">)</tt> </tt>
<a name="L1156"></a><tt class="py-lineno">1156</tt>  <tt class="py-line">    <tt class="py-name">xym</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-449" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-449', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt><tt class="py-name">xx</tt><tt class="py-op">*</tt><tt class="py-name">yy</tt><tt class="py-op">)</tt> </tt>
<a name="L1157"></a><tt class="py-lineno">1157</tt>  <tt class="py-line">    <tt class="py-name">xxm</tt><tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-450" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-450', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt><tt class="py-name">xx</tt><tt class="py-op">*</tt><tt class="py-name">xx</tt><tt class="py-op">)</tt> </tt>
<a name="L1158"></a><tt class="py-lineno">1158</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">xm</tt> <tt class="py-op">*</tt> <tt class="py-name">ym</tt> <tt class="py-op">-</tt> <tt class="py-name">xym</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-op">(</tt><tt class="py-name">xm</tt><tt class="py-op">*</tt><tt class="py-name">xm</tt> <tt class="py-op">-</tt> <tt class="py-name">xxm</tt><tt class="py-op">)</tt> </tt>
<a name="L1159"></a><tt class="py-lineno">1159</tt>  <tt class="py-line">    <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">ym</tt><tt class="py-op">-</tt><tt class="py-name">a</tt><tt class="py-op">*</tt><tt class="py-name">xm</tt> </tt>
<a name="L1160"></a><tt class="py-lineno">1160</tt>  <tt class="py-line"> </tt>
<a name="L1161"></a><tt class="py-lineno">1161</tt>  <tt class="py-line">    <tt class="py-name">deltaSumPerVal</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt> <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">*</tt><tt class="py-name">xx</tt><tt class="py-op">+</tt><tt class="py-name">b</tt> <tt class="py-op">-</tt> <tt class="py-name">yy</tt><tt class="py-op">)</tt> <tt class="py-op">**</tt> <tt class="py-number">2</tt> <tt class="py-op">)</tt> <tt class="py-op">**</tt><tt class="py-number">.5</tt>   <tt class="py-op">/</tt> <tt class="py-name">xx</tt><tt class="py-op">.</tt><tt id="link-451" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-451', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L1162"></a><tt class="py-lineno">1162</tt>  <tt class="py-line">     </tt>
<a name="L1163"></a><tt class="py-lineno">1163</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">b</tt><tt class="py-op">,</tt> <tt class="py-name">deltaSumPerVal</tt><tt class="py-op">)</tt> </tt>
</div><a name="L1164"></a><tt class="py-lineno">1164</tt>  <tt class="py-line"> </tt>
<a name="L1165"></a><tt class="py-lineno">1165</tt>  <tt class="py-line"><tt class="py-string">'''</tt> </tt>
<a name="L1166"></a><tt class="py-lineno">1166</tt>  <tt class="py-line"><tt class="py-string">def fitAnyND(f, parmTuple0, arr, max_iterations=None):</tt> </tt>
<a name="L1167"></a><tt class="py-lineno">1167</tt>  <tt class="py-line"><tt class="py-string">    """</tt> </tt>
<a name="L1168"></a><tt class="py-lineno">1168</tt>  <tt class="py-line"><tt class="py-string">    arr is an nd-array</tt> </tt>
<a name="L1169"></a><tt class="py-lineno">1169</tt>  <tt class="py-line"><tt class="py-string">    todo: optional "delta-Y"-array</tt> </tt>
<a name="L1170"></a><tt class="py-lineno">1170</tt>  <tt class="py-line"><tt class="py-string">    </tt> </tt>
<a name="L1171"></a><tt class="py-lineno">1171</tt>  <tt class="py-line"><tt class="py-string">    f is your 'model' function that takes two arguments:</tt> </tt>
<a name="L1172"></a><tt class="py-lineno">1172</tt>  <tt class="py-line"><tt class="py-string">    a tuple of parameters and x</tt> </tt>
<a name="L1173"></a><tt class="py-lineno">1173</tt>  <tt class="py-line"><tt class="py-string">    </tt> </tt>
<a name="L1174"></a><tt class="py-lineno">1174</tt>  <tt class="py-line"><tt class="py-string">    The function returns a list containing the optimal parameter values</tt> </tt>
<a name="L1175"></a><tt class="py-lineno">1175</tt>  <tt class="py-line"><tt class="py-string">    and the chi-squared value describing the quality of the fit.</tt> </tt>
<a name="L1176"></a><tt class="py-lineno">1176</tt>  <tt class="py-line"><tt class="py-string">    """</tt> </tt>
<a name="L1177"></a><tt class="py-lineno">1177</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1178"></a><tt class="py-lineno">1178</tt>  <tt class="py-line"><tt class="py-string">    from Scientific.Functions.LeastSquares import leastSquaresFit</tt> </tt>
<a name="L1179"></a><tt class="py-lineno">1179</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1180"></a><tt class="py-lineno">1180</tt>  <tt class="py-line"><tt class="py-string">    coords = N.transpose(N.indices(arr.shape), range(1,arr.ndim+1)+[0]).copy() # 'x' (tuples)</tt> </tt>
<a name="L1181"></a><tt class="py-lineno">1181</tt>  <tt class="py-line"><tt class="py-string">    coords.shape=(-1,arr.ndim)</tt> </tt>
<a name="L1182"></a><tt class="py-lineno">1182</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1183"></a><tt class="py-lineno">1183</tt>  <tt class="py-line"><tt class="py-string">    data = [(p, arr[tuple(p)]) for p in coords]</tt> </tt>
<a name="L1184"></a><tt class="py-lineno">1184</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1185"></a><tt class="py-lineno">1185</tt>  <tt class="py-line"><tt class="py-string">    return leastSquaresFit(f,parmTuple0,data, max_iterations)</tt> </tt>
<a name="L1186"></a><tt class="py-lineno">1186</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1187"></a><tt class="py-lineno">1187</tt>  <tt class="py-line"><tt class="py-string">def _gaussian2D_5_N(parms, coor_tuple):</tt> </tt>
<a name="L1188"></a><tt class="py-lineno">1188</tt>  <tt class="py-line"><tt class="py-string">    """parms: peakValue, sigmay,x,centery,x"""</tt> </tt>
<a name="L1189"></a><tt class="py-lineno">1189</tt>  <tt class="py-line"><tt class="py-string">    import Numeric as Num</tt> </tt>
<a name="L1190"></a><tt class="py-lineno">1190</tt>  <tt class="py-line"><tt class="py-string">    amp = parms[0]</tt> </tt>
<a name="L1191"></a><tt class="py-lineno">1191</tt>  <tt class="py-line"><tt class="py-string">    sig_y = parms[1]</tt> </tt>
<a name="L1192"></a><tt class="py-lineno">1192</tt>  <tt class="py-line"><tt class="py-string">    sig_x = parms[2]</tt> </tt>
<a name="L1193"></a><tt class="py-lineno">1193</tt>  <tt class="py-line"><tt class="py-string">    y0 = parms[3]</tt> </tt>
<a name="L1194"></a><tt class="py-lineno">1194</tt>  <tt class="py-line"><tt class="py-string">    x0 = parms[4]</tt> </tt>
<a name="L1195"></a><tt class="py-lineno">1195</tt>  <tt class="py-line"><tt class="py-string">    y = coor_tuple[-2]</tt> </tt>
<a name="L1196"></a><tt class="py-lineno">1196</tt>  <tt class="py-line"><tt class="py-string">    x = coor_tuple[-1]</tt> </tt>
<a name="L1197"></a><tt class="py-lineno">1197</tt>  <tt class="py-line"><tt class="py-string">    dy = (y-y0)/sig_y</tt> </tt>
<a name="L1198"></a><tt class="py-lineno">1198</tt>  <tt class="py-line"><tt class="py-string">    dx = (x-x0)/sig_x</tt> </tt>
<a name="L1199"></a><tt class="py-lineno">1199</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1200"></a><tt class="py-lineno">1200</tt>  <tt class="py-line"><tt class="py-string">    return amp*Num.exp(-0.5*( dy*dy + dx*dx) )</tt> </tt>
<a name="L1201"></a><tt class="py-lineno">1201</tt>  <tt class="py-line"><tt class="py-string">def _gaussian3D_7_N(parms, coor_tuple):</tt> </tt>
<a name="L1202"></a><tt class="py-lineno">1202</tt>  <tt class="py-line"><tt class="py-string">    """parms: peakValue, sigmaz,y,x,centerz,y,x"""</tt> </tt>
<a name="L1203"></a><tt class="py-lineno">1203</tt>  <tt class="py-line"><tt class="py-string">    import Numeric as Num</tt> </tt>
<a name="L1204"></a><tt class="py-lineno">1204</tt>  <tt class="py-line"><tt class="py-string">    amp = parms[0]</tt> </tt>
<a name="L1205"></a><tt class="py-lineno">1205</tt>  <tt class="py-line"><tt class="py-string">    sig_z = parms[1]</tt> </tt>
<a name="L1206"></a><tt class="py-lineno">1206</tt>  <tt class="py-line"><tt class="py-string">    sig_y = parms[2]</tt> </tt>
<a name="L1207"></a><tt class="py-lineno">1207</tt>  <tt class="py-line"><tt class="py-string">    sig_x = parms[3]</tt> </tt>
<a name="L1208"></a><tt class="py-lineno">1208</tt>  <tt class="py-line"><tt class="py-string">    z0 = parms[4]</tt> </tt>
<a name="L1209"></a><tt class="py-lineno">1209</tt>  <tt class="py-line"><tt class="py-string">    y0 = parms[5]</tt> </tt>
<a name="L1210"></a><tt class="py-lineno">1210</tt>  <tt class="py-line"><tt class="py-string">    x0 = parms[6]</tt> </tt>
<a name="L1211"></a><tt class="py-lineno">1211</tt>  <tt class="py-line"><tt class="py-string">    z = coor_tuple[-3]</tt> </tt>
<a name="L1212"></a><tt class="py-lineno">1212</tt>  <tt class="py-line"><tt class="py-string">    y = coor_tuple[-2]</tt> </tt>
<a name="L1213"></a><tt class="py-lineno">1213</tt>  <tt class="py-line"><tt class="py-string">    x = coor_tuple[-1]</tt> </tt>
<a name="L1214"></a><tt class="py-lineno">1214</tt>  <tt class="py-line"><tt class="py-string">    dz = (z-z0)/sig_z</tt> </tt>
<a name="L1215"></a><tt class="py-lineno">1215</tt>  <tt class="py-line"><tt class="py-string">    dy = (y-y0)/sig_y</tt> </tt>
<a name="L1216"></a><tt class="py-lineno">1216</tt>  <tt class="py-line"><tt class="py-string">    dx = (x-x0)/sig_x</tt> </tt>
<a name="L1217"></a><tt class="py-lineno">1217</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1218"></a><tt class="py-lineno">1218</tt>  <tt class="py-line"><tt class="py-string">    return amp*Num.exp(-0.5*( dz*dz + dy*dy + dx*dx) )</tt> </tt>
<a name="L1219"></a><tt class="py-lineno">1219</tt>  <tt class="py-line"><tt class="py-string">    </tt> </tt>
<a name="L1220"></a><tt class="py-lineno">1220</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1221"></a><tt class="py-lineno">1221</tt>  <tt class="py-line"><tt class="py-string">def fitGaussian2D(parmTuple0, arr, max_iterations=None):</tt> </tt>
<a name="L1222"></a><tt class="py-lineno">1222</tt>  <tt class="py-line"><tt class="py-string">    """parms: peakValue, sigmay,x,centery,x"""</tt> </tt>
<a name="L1223"></a><tt class="py-lineno">1223</tt>  <tt class="py-line"><tt class="py-string">    if arr.ndim != 2:</tt> </tt>
<a name="L1224"></a><tt class="py-lineno">1224</tt>  <tt class="py-line"><tt class="py-string">        raise ValueError, "arr must be of ndim 2"</tt> </tt>
<a name="L1225"></a><tt class="py-lineno">1225</tt>  <tt class="py-line"><tt class="py-string">    if len(parmTuple0) != 5:</tt> </tt>
<a name="L1226"></a><tt class="py-lineno">1226</tt>  <tt class="py-line"><tt class="py-string">        raise ValueError, "parmTuple0 must be a 5-tuple: peakValue, sigmay,x,centery,x"</tt> </tt>
<a name="L1227"></a><tt class="py-lineno">1227</tt>  <tt class="py-line"><tt class="py-string">    return fitAnyND(_gaussian2D_5_N, parmTuple0, arr, max_iterations)    </tt> </tt>
<a name="L1228"></a><tt class="py-lineno">1228</tt>  <tt class="py-line"><tt class="py-string">def fitGaussian3D(parmTuple0, arr, max_iterations=None):</tt> </tt>
<a name="L1229"></a><tt class="py-lineno">1229</tt>  <tt class="py-line"><tt class="py-string">    """parms: peakValue, sigmaz,y,x,centerz,y,x"""</tt> </tt>
<a name="L1230"></a><tt class="py-lineno">1230</tt>  <tt class="py-line"><tt class="py-string">    if arr.ndim != 3:</tt> </tt>
<a name="L1231"></a><tt class="py-lineno">1231</tt>  <tt class="py-line"><tt class="py-string">        raise ValueError, "arr must be of ndim 3"</tt> </tt>
<a name="L1232"></a><tt class="py-lineno">1232</tt>  <tt class="py-line"><tt class="py-string">    if len(parmTuple0) != 7:</tt> </tt>
<a name="L1233"></a><tt class="py-lineno">1233</tt>  <tt class="py-line"><tt class="py-string">        raise ValueError, "parmTuple0 must be a 7-tuple: peakValue, sigmaz,y,x,centerz,y,x"</tt> </tt>
<a name="L1234"></a><tt class="py-lineno">1234</tt>  <tt class="py-line"><tt class="py-string">    return fitAnyND(_gaussian3D_7_N, parmTuple0, arr, max_iterations)    </tt> </tt>
<a name="L1235"></a><tt class="py-lineno">1235</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1236"></a><tt class="py-lineno">1236</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1237"></a><tt class="py-lineno">1237</tt>  <tt class="py-line"><tt class="py-string">'''</tt> </tt>
<a name="L1238"></a><tt class="py-lineno">1238</tt>  <tt class="py-line"> </tt>
<a name="L1239"></a><tt class="py-lineno">1239</tt>  <tt class="py-line"> </tt>
<a name="L1240"></a><tt class="py-lineno">1240</tt>  <tt class="py-line"> </tt>
<a name="yGaussian"></a><div id="yGaussian-def"><a name="L1241"></a><tt class="py-lineno">1241</tt> <a class="py-toggle" href="#" id="yGaussian-toggle" onclick="return toggle('yGaussian');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#yGaussian">yGaussian</a><tt class="py-op">(</tt><tt class="py-param">parms</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">10</tt><tt class="py-op">,</tt><tt class="py-number">100</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-param">t</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="yGaussian-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="yGaussian-expanded"><a name="L1242"></a><tt class="py-lineno">1242</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1243"></a><tt class="py-lineno">1243</tt>  <tt class="py-line"><tt class="py-docstring">    t can be a scalar or a vector</tt> </tt>
<a name="L1244"></a><tt class="py-lineno">1244</tt>  <tt class="py-line"><tt class="py-docstring">    returns y value(s) of a 1D-gaussian model</tt> </tt>
<a name="L1245"></a><tt class="py-lineno">1245</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1246"></a><tt class="py-lineno">1246</tt>  <tt class="py-line"><tt class="py-docstring">    parms can be tuple of length 2,3 or 4, with</tt> </tt>
<a name="L1247"></a><tt class="py-lineno">1247</tt>  <tt class="py-line"><tt class="py-docstring">    2: tuple is [sigma, peakVal]</tt> </tt>
<a name="L1248"></a><tt class="py-lineno">1248</tt>  <tt class="py-line"><tt class="py-docstring">    3: tuple is [x0, sigma, peakVal]</tt> </tt>
<a name="L1249"></a><tt class="py-lineno">1249</tt>  <tt class="py-line"><tt class="py-docstring">    4: tuple is [y0, x0, sigma, peakVal]</tt> </tt>
<a name="L1250"></a><tt class="py-lineno">1250</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1251"></a><tt class="py-lineno">1251</tt>  <tt class="py-line"><tt class="py-docstring">    x0 is center of gaussian (default 0)</tt> </tt>
<a name="L1252"></a><tt class="py-lineno">1252</tt>  <tt class="py-line"><tt class="py-docstring">    y0 is baseline offset gaussian (default 0)</tt> </tt>
<a name="L1253"></a><tt class="py-lineno">1253</tt>  <tt class="py-line"><tt class="py-docstring">    sigma is sigma (stddev) of gaussian</tt> </tt>
<a name="L1254"></a><tt class="py-lineno">1254</tt>  <tt class="py-line"><tt class="py-docstring">    peakval is  "center height" above baseline</tt> </tt>
<a name="L1255"></a><tt class="py-lineno">1255</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1256"></a><tt class="py-lineno">1256</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-452" class="py-name" targets="Module Priithon.fftfuncs=Priithon.fftfuncs-module.html"><a title="Priithon.fftfuncs" class="py-name" href="#" onclick="return doclink('link-452', 'fftfuncs', 'link-452');">fftfuncs</a></tt> <tt class="py-keyword">as</tt> <tt class="py-name">F</tt> </tt>
<a name="L1257"></a><tt class="py-lineno">1257</tt>  <tt class="py-line"> </tt>
<a name="L1258"></a><tt class="py-lineno">1258</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">parms</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">4</tt><tt class="py-op">:</tt> </tt>
<a name="L1259"></a><tt class="py-lineno">1259</tt>  <tt class="py-line">        <tt class="py-name">y0</tt><tt class="py-op">,</tt><tt class="py-name">x0</tt> <tt class="py-op">=</tt> <tt class="py-name">parms</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">2</tt><tt class="py-op">]</tt> </tt>
<a name="L1260"></a><tt class="py-lineno">1260</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">parms</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">3</tt><tt class="py-op">:</tt> </tt>
<a name="L1261"></a><tt class="py-lineno">1261</tt>  <tt class="py-line">        <tt class="py-name">y0</tt><tt class="py-op">,</tt><tt class="py-name">x0</tt> <tt class="py-op">=</tt> <tt class="py-number">0.0</tt><tt class="py-op">,</tt> <tt class="py-name">parms</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L1262"></a><tt class="py-lineno">1262</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1263"></a><tt class="py-lineno">1263</tt>  <tt class="py-line">        <tt class="py-name">y0</tt><tt class="py-op">,</tt><tt class="py-name">x0</tt> <tt class="py-op">=</tt> <tt class="py-number">0.0</tt><tt class="py-op">,</tt> <tt class="py-number">0.0</tt> </tt>
<a name="L1264"></a><tt class="py-lineno">1264</tt>  <tt class="py-line">    <tt class="py-name">sigma</tt><tt class="py-op">,</tt> <tt class="py-name">peakVal</tt> <tt class="py-op">=</tt> <tt class="py-name">parms</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L1265"></a><tt class="py-lineno">1265</tt>  <tt class="py-line"> </tt>
<a name="L1266"></a><tt class="py-lineno">1266</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">y0</tt><tt class="py-op">+</tt><tt class="py-name">F</tt><tt class="py-op">.</tt><tt id="link-453" class="py-name" targets="Function Priithon.fftfuncs.gaussian()=Priithon.fftfuncs-module.html#gaussian"><a title="Priithon.fftfuncs.gaussian" class="py-name" href="#" onclick="return doclink('link-453', 'gaussian', 'link-453');">gaussian</a></tt><tt class="py-op">(</tt><tt class="py-name">t</tt><tt class="py-op">-</tt><tt class="py-name">x0</tt><tt class="py-op">,</tt> <tt class="py-name">dim</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">sigma</tt><tt class="py-op">=</tt><tt class="py-name">sigma</tt><tt class="py-op">,</tt> <tt class="py-name">peakVal</tt><tt class="py-op">=</tt><tt class="py-name">peakVal</tt><tt class="py-op">)</tt> </tt>
</div><a name="L1267"></a><tt class="py-lineno">1267</tt>  <tt class="py-line"> </tt>
<a name="yDecay"></a><div id="yDecay-def"><a name="L1268"></a><tt class="py-lineno">1268</tt> <a class="py-toggle" href="#" id="yDecay-toggle" onclick="return toggle('yDecay');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#yDecay">yDecay</a><tt class="py-op">(</tt><tt class="py-param">parms</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">1000</tt><tt class="py-op">,</tt><tt class="py-number">10000</tt><tt class="py-op">,</tt><tt class="py-number">10</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-param">t</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="yDecay-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="yDecay-expanded"><a name="L1269"></a><tt class="py-lineno">1269</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1270"></a><tt class="py-lineno">1270</tt>  <tt class="py-line"><tt class="py-docstring">    t can be a scalar or a vector</tt> </tt>
<a name="L1271"></a><tt class="py-lineno">1271</tt>  <tt class="py-line"><tt class="py-docstring">    returns y value(s) of a decay model</tt> </tt>
<a name="L1272"></a><tt class="py-lineno">1272</tt>  <tt class="py-line"><tt class="py-docstring">    parms:</tt> </tt>
<a name="L1273"></a><tt class="py-lineno">1273</tt>  <tt class="py-line"><tt class="py-docstring">        tuple of 1 or 3 or 5 or .. values</tt> </tt>
<a name="L1274"></a><tt class="py-lineno">1274</tt>  <tt class="py-line"><tt class="py-docstring">        first baseline = asymtote =y for t-&gt; inf</tt> </tt>
<a name="L1275"></a><tt class="py-lineno">1275</tt>  <tt class="py-line"><tt class="py-docstring">        then pairs:</tt> </tt>
<a name="L1276"></a><tt class="py-lineno">1276</tt>  <tt class="py-line"><tt class="py-docstring">          first:  intercept of an exponential decay</tt> </tt>
<a name="L1277"></a><tt class="py-lineno">1277</tt>  <tt class="py-line"><tt class="py-docstring">          second: half-time of an exponential decay</tt> </tt>
<a name="L1278"></a><tt class="py-lineno">1278</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1279"></a><tt class="py-lineno">1279</tt>  <tt class="py-line"><tt class="py-docstring">        for more than 3 parameters: sum multiple such decay terms</tt> </tt>
<a name="L1280"></a><tt class="py-lineno">1280</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1281"></a><tt class="py-lineno">1281</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">parms</tt><tt class="py-op">)</tt> <tt class="py-op">%</tt> <tt class="py-number">2</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L1282"></a><tt class="py-lineno">1282</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"number of parms must be odd: one offset and 2 more for each exponential"</tt> </tt>
<a name="L1283"></a><tt class="py-lineno">1283</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L1284"></a><tt class="py-lineno">1284</tt>  <tt class="py-line">        <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">t</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-name">parms</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L1285"></a><tt class="py-lineno">1285</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt><tt class="py-op">:</tt> <tt class="py-comment"># t has no len</tt> </tt>
<a name="L1286"></a><tt class="py-lineno">1286</tt>  <tt class="py-line">        <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">parms</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L1287"></a><tt class="py-lineno">1287</tt>  <tt class="py-line"> </tt>
<a name="L1288"></a><tt class="py-lineno">1288</tt>  <tt class="py-line">    <tt class="py-name">halfTimeScaler</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-454" class="py-name"><a title="Priithon.mandel.log
Priithon.plt.interface.log
Priithon.plt.log
Priithon.plt.plot_objects.log
Priithon.plt.plot_utility.log
Priithon.plt.wxplt.log
Priithon.wxAsyncDispatcher.DispatcherConnection.log" class="py-name" href="#" onclick="return doclink('link-454', 'log', 'link-224');">log</a></tt><tt class="py-op">(</tt><tt class="py-number">2.</tt><tt class="py-op">)</tt> </tt>
<a name="L1289"></a><tt class="py-lineno">1289</tt>  <tt class="py-line">    <tt class="py-name">n</tt> <tt class="py-op">=</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt> <tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">parms</tt><tt class="py-op">)</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-number">2</tt> <tt class="py-op">)</tt> </tt>
<a name="L1290"></a><tt class="py-lineno">1290</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-455" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-455', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-456" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-456', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1291"></a><tt class="py-lineno">1291</tt>  <tt class="py-line">        <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">r</tt> <tt class="py-op">+</tt> <tt class="py-name">parms</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">+</tt><tt class="py-number">2</tt><tt class="py-op">*</tt><tt id="link-457" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-457', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">*</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-458" class="py-name" targets="Variable Priithon.mandel.exp=Priithon.mandel-module.html#exp,Variable Priithon.plt.exp=Priithon.plt-module.html#exp,Variable Priithon.plt.interface.exp=Priithon.plt.interface-module.html#exp,Variable Priithon.plt.plot_objects.exp=Priithon.plt.plot_objects-module.html#exp,Variable Priithon.plt.plot_utility.exp=Priithon.plt.plot_utility-module.html#exp,Variable Priithon.plt.wxplt.exp=Priithon.plt.wxplt-module.html#exp"><a title="Priithon.mandel.exp
Priithon.plt.exp
Priithon.plt.interface.exp
Priithon.plt.plot_objects.exp
Priithon.plt.plot_utility.exp
Priithon.plt.wxplt.exp" class="py-name" href="#" onclick="return doclink('link-458', 'exp', 'link-458');">exp</a></tt><tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-name">t</tt> <tt class="py-op">*</tt><tt class="py-name">halfTimeScaler</tt><tt class="py-op">/</tt> <tt class="py-name">parms</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">+</tt><tt class="py-number">2</tt><tt class="py-op">*</tt><tt id="link-459" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-459', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1292"></a><tt class="py-lineno">1292</tt>  <tt class="py-line"><tt class="py-comment">#       r = r + parms[1+2*i] * N.exp(-t *halfTimeScaler/ float(parms[2+2*i]))</tt> </tt>
<a name="L1293"></a><tt class="py-lineno">1293</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
</div><a name="yPoly"></a><div id="yPoly-def"><a name="L1294"></a><tt class="py-lineno">1294</tt> <a class="py-toggle" href="#" id="yPoly-toggle" onclick="return toggle('yPoly');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#yPoly">yPoly</a><tt class="py-op">(</tt><tt class="py-param">parms</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-param">t</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="yPoly-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="yPoly-expanded"><a name="L1295"></a><tt class="py-lineno">1295</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1296"></a><tt class="py-lineno">1296</tt>  <tt class="py-line"><tt class="py-docstring">    t can be a scalar or a vector</tt> </tt>
<a name="L1297"></a><tt class="py-lineno">1297</tt>  <tt class="py-line"><tt class="py-docstring">    returns y value(s) of a polygon model</tt> </tt>
<a name="L1298"></a><tt class="py-lineno">1298</tt>  <tt class="py-line"><tt class="py-docstring">    parms:</tt> </tt>
<a name="L1299"></a><tt class="py-lineno">1299</tt>  <tt class="py-line"><tt class="py-docstring">      baseline, first-order coeff, 2nd, ...</tt> </tt>
<a name="L1300"></a><tt class="py-lineno">1300</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1301"></a><tt class="py-lineno">1301</tt>  <tt class="py-line">    <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-number">0.0</tt> </tt>
<a name="L1302"></a><tt class="py-lineno">1302</tt>  <tt class="py-line">    <tt class="py-name">tPow</tt> <tt class="py-op">=</tt> <tt class="py-number">1.</tt> </tt>
<a name="L1303"></a><tt class="py-lineno">1303</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-460" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-460', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-461" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-461', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">parms</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1304"></a><tt class="py-lineno">1304</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-462" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-462', 'i', 'link-65');">i</a></tt><tt class="py-op">:</tt> </tt>
<a name="L1305"></a><tt class="py-lineno">1305</tt>  <tt class="py-line">            <tt class="py-name">tPow</tt> <tt class="py-op">*=</tt> <tt class="py-name">t</tt> </tt>
<a name="L1306"></a><tt class="py-lineno">1306</tt>  <tt class="py-line">        <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">r</tt> <tt class="py-op">+</tt> <tt class="py-name">parms</tt><tt class="py-op">[</tt><tt id="link-463" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-463', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">*</tt><tt class="py-name">tPow</tt> <tt class="py-comment"># N.power(t, i)</tt> </tt>
<a name="L1307"></a><tt class="py-lineno">1307</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
</div><a name="L1308"></a><tt class="py-lineno">1308</tt>  <tt class="py-line"> </tt>
<a name="yLine"></a><div id="yLine-def"><a name="L1309"></a><tt class="py-lineno">1309</tt> <a class="py-toggle" href="#" id="yLine-toggle" onclick="return toggle('yLine');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#yLine">yLine</a><tt class="py-op">(</tt><tt class="py-param">abTuple</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-param">t</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="yLine-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="yLine-expanded"><a name="L1310"></a><tt class="py-lineno">1310</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1311"></a><tt class="py-lineno">1311</tt>  <tt class="py-line"><tt class="py-docstring">    t can be a scalar or a vector</tt> </tt>
<a name="L1312"></a><tt class="py-lineno">1312</tt>  <tt class="py-line"><tt class="py-docstring">    returns y value(s) of a line model</tt> </tt>
<a name="L1313"></a><tt class="py-lineno">1313</tt>  <tt class="py-line"><tt class="py-docstring">    parms:</tt> </tt>
<a name="L1314"></a><tt class="py-lineno">1314</tt>  <tt class="py-line"><tt class="py-docstring">      abTuple: a,b  - as in y= ax + b</tt> </tt>
<a name="L1315"></a><tt class="py-lineno">1315</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1316"></a><tt class="py-lineno">1316</tt>  <tt class="py-line">    <tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">abTuple</tt> </tt>
<a name="L1317"></a><tt class="py-lineno">1317</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt><tt class="py-op">+</tt><tt class="py-name">a</tt><tt class="py-op">*</tt><tt class="py-name">t</tt> </tt>
</div><a name="L1318"></a><tt class="py-lineno">1318</tt>  <tt class="py-line"> </tt>
<a name="L1319"></a><tt class="py-lineno">1319</tt>  <tt class="py-line"> </tt>
<a name="L1320"></a><tt class="py-lineno">1320</tt>  <tt class="py-line"> </tt>
<a name="L1321"></a><tt class="py-lineno">1321</tt>  <tt class="py-line"> </tt>
<a name="L1322"></a><tt class="py-lineno">1322</tt>  <tt class="py-line"> </tt>
<a name="fitAny"></a><div id="fitAny-def"><a name="L1323"></a><tt class="py-lineno">1323</tt> <a class="py-toggle" href="#" id="fitAny-toggle" onclick="return toggle('fitAny');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#fitAny">fitAny</a><tt class="py-op">(</tt><tt class="py-param">f</tt><tt class="py-op">,</tt> <tt class="py-param">parmTuple0</tt><tt class="py-op">,</tt> <tt class="py-param">data</tt><tt class="py-op">,</tt> <tt class="py-param">fixed_mask</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-param">leastsq_kwargs</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="fitAny-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="fitAny-expanded"><a name="L1324"></a><tt class="py-lineno">1324</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1325"></a><tt class="py-lineno">1325</tt>  <tt class="py-line"><tt class="py-docstring">    data should be list of (x,y)  tuples</tt> </tt>
<a name="L1326"></a><tt class="py-lineno">1326</tt>  <tt class="py-line"><tt class="py-docstring">    or (x,y,deltaY) [ weighted fitting: minimize (y(x)-x)/deltaY ]</tt> </tt>
<a name="L1327"></a><tt class="py-lineno">1327</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1328"></a><tt class="py-lineno">1328</tt>  <tt class="py-line"><tt class="py-docstring">    (instead of 'list' you can of course have an array w/</tt> </tt>
<a name="L1329"></a><tt class="py-lineno">1329</tt>  <tt class="py-line"><tt class="py-docstring">    shape=(n,2) or shape=(n,3), n beeing the number of data points</tt> </tt>
<a name="L1330"></a><tt class="py-lineno">1330</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1331"></a><tt class="py-lineno">1331</tt>  <tt class="py-line"><tt class="py-docstring">    if data.ndim == 1 or data.shape = (n,1) it fits assuming x=0,1,2,3,...n-1</tt> </tt>
<a name="L1332"></a><tt class="py-lineno">1332</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1333"></a><tt class="py-lineno">1333</tt>  <tt class="py-line"><tt class="py-docstring">    f is your 'model' function that takes two arguments:</tt> </tt>
<a name="L1334"></a><tt class="py-lineno">1334</tt>  <tt class="py-line"><tt class="py-docstring">       a tuple of parameters and x</tt> </tt>
<a name="L1335"></a><tt class="py-lineno">1335</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L1336"></a><tt class="py-lineno">1336</tt>  <tt class="py-line"><tt class="py-docstring">    The function returns a list containing the optimal parameter values</tt> </tt>
<a name="L1337"></a><tt class="py-lineno">1337</tt>  <tt class="py-line"><tt class="py-docstring">    and the chi-squared value describing the quality of the fit. (CHECK if this is true)</tt> </tt>
<a name="L1338"></a><tt class="py-lineno">1338</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1339"></a><tt class="py-lineno">1339</tt>  <tt class="py-line"><tt class="py-docstring">    fixed_mask: if not None: </tt> </tt>
<a name="L1340"></a><tt class="py-lineno">1340</tt>  <tt class="py-line"><tt class="py-docstring">       this sequence of bool values determinces if the respective parameter</tt> </tt>
<a name="L1341"></a><tt class="py-lineno">1341</tt>  <tt class="py-line"><tt class="py-docstring">       shall be fixed or free to be adjusted</tt> </tt>
<a name="L1342"></a><tt class="py-lineno">1342</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1343"></a><tt class="py-lineno">1343</tt>  <tt class="py-line"><tt class="py-docstring">    leastsq_kwargs: optional arguments feed to scipy.optimize.leastsq:</tt> </tt>
<a name="L1344"></a><tt class="py-lineno">1344</tt>  <tt class="py-line"><tt class="py-docstring">       useful might be e.g.: </tt> </tt>
<a name="L1345"></a><tt class="py-lineno">1345</tt>  <tt class="py-line"><tt class="py-docstring">        * maxfev -- The maximum number of calls to the function. If zero,</tt> </tt>
<a name="L1346"></a><tt class="py-lineno">1346</tt>  <tt class="py-line"><tt class="py-docstring">           then 100*(N+1) is the maximum where N is the number</tt> </tt>
<a name="L1347"></a><tt class="py-lineno">1347</tt>  <tt class="py-line"><tt class="py-docstring">           of elements in x0.</tt> </tt>
<a name="L1348"></a><tt class="py-lineno">1348</tt>  <tt class="py-line"><tt class="py-docstring">        * full_output -- non-zero to return all optional outputs.</tt> </tt>
<a name="L1349"></a><tt class="py-lineno">1349</tt>  <tt class="py-line"><tt class="py-docstring">        * warning -- True to print a warning message when the call is</tt> </tt>
<a name="L1350"></a><tt class="py-lineno">1350</tt>  <tt class="py-line"><tt class="py-docstring">             unsuccessful; False to suppress the warning message.</tt> </tt>
<a name="L1351"></a><tt class="py-lineno">1351</tt>  <tt class="py-line"><tt class="py-docstring">        for more see scipy.optimize.leastsq</tt> </tt>
<a name="L1352"></a><tt class="py-lineno">1352</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1353"></a><tt class="py-lineno">1353</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-name">scipy</tt><tt class="py-op">.</tt><tt class="py-name">optimize</tt> <tt class="py-keyword">import</tt> <tt class="py-name">leastsq</tt> </tt>
<a name="L1354"></a><tt class="py-lineno">1354</tt>  <tt class="py-line"> </tt>
<a name="L1355"></a><tt class="py-lineno">1355</tt>  <tt class="py-line">    <tt id="link-464" class="py-name" targets="Variable Priithon.viewerRubberbandMode.viewerRubberbandMode.data=Priithon.viewerRubberbandMode.viewerRubberbandMode-class.html#data"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-464', 'data', 'link-464');">data</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-465" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-465', 'data', 'link-464');">data</a></tt><tt class="py-op">,</tt> <tt id="link-466" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-466', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float64</tt><tt class="py-op">)</tt> </tt>
<a name="L1356"></a><tt class="py-lineno">1356</tt>  <tt class="py-line"> </tt>
<a name="L1357"></a><tt class="py-lineno">1357</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-467" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-467', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt id="link-468" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-468', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L1358"></a><tt class="py-lineno">1358</tt>  <tt class="py-line">        <tt id="link-469" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-469', 'data', 'link-464');">data</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-470" class="py-name" targets="Method Priithon.mockNDarray.mockNDarray.transpose()=Priithon.mockNDarray.mockNDarray-class.html#transpose"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-470', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">arange</tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-471" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-471', 'data', 'link-464');">data</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-472" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-472', 'data', 'link-464');">data</a></tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L1359"></a><tt class="py-lineno">1359</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt id="link-473" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-473', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt id="link-474" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-474', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L1360"></a><tt class="py-lineno">1360</tt>  <tt class="py-line">        <tt id="link-475" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-475', 'data', 'link-464');">data</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-476" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-476', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">arange</tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-477" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-477', 'data', 'link-464');">data</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-478" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-478', 'data', 'link-464');">data</a></tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L1361"></a><tt class="py-lineno">1361</tt>  <tt class="py-line"> </tt>
<a name="L1362"></a><tt class="py-lineno">1362</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-479" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-479', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt id="link-480" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-480', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">2</tt><tt class="py-op">:</tt>   <tt class="py-comment"># x,y tuples</tt> </tt>
<a name="L1363"></a><tt class="py-lineno">1363</tt>  <tt class="py-line">        <tt id="link-481" class="py-name" targets="Variable Priithon.viewer.x=Priithon.viewer-module.html#x,Variable Priithon.viewer2.x=Priithon.viewer2-module.html#x,Variable Priithon.viewerCommon.x=Priithon.viewerCommon-module.html#x"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-481', 'x', 'link-481');">x</a></tt><tt class="py-op">,</tt><tt class="py-name">y</tt> <tt class="py-op">=</tt> <tt id="link-482" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-482', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt class="py-name">T</tt> </tt>
<a name="L1364"></a><tt class="py-lineno">1364</tt>  <tt class="py-line">        <tt class="py-name">yErr</tt> <tt class="py-op">=</tt> <tt class="py-number">1</tt> </tt>
<a name="L1365"></a><tt class="py-lineno">1365</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt id="link-483" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-483', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt id="link-484" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-484', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">3</tt><tt class="py-op">:</tt> <tt class="py-comment"># x,y,err tuples (weigthed fitting)</tt> </tt>
<a name="L1366"></a><tt class="py-lineno">1366</tt>  <tt class="py-line">        <tt id="link-485" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-485', 'x', 'link-481');">x</a></tt><tt class="py-op">,</tt><tt class="py-name">y</tt><tt class="py-op">,</tt><tt class="py-name">yErr</tt> <tt class="py-op">=</tt> <tt id="link-486" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-486', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt class="py-name">T</tt> </tt>
<a name="L1367"></a><tt class="py-lineno">1367</tt>  <tt class="py-line"> </tt>
<a name="L1368"></a><tt class="py-lineno">1368</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">fixed_mask</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1369"></a><tt class="py-lineno">1369</tt>  <tt class="py-line">        <tt class="py-comment"># just in case fixed_mask is too long for parmTuple</tt> </tt>
<a name="L1370"></a><tt class="py-lineno">1370</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-name">fixed_mask</tt> <tt class="py-op">=</tt> <tt class="py-name">fixed_mask</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">parmTuple0</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L1371"></a><tt class="py-lineno">1371</tt>  <tt class="py-line"> </tt>
<a name="L1372"></a><tt class="py-lineno">1372</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">fixed_mask</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">or</tt> <tt class="py-keyword">not</tt> <tt class="py-name">any</tt><tt class="py-op">(</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1373"></a><tt class="py-lineno">1373</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">yErr</tt> <tt class="py-keyword">is</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L1374"></a><tt class="py-lineno">1374</tt>  <tt class="py-line">            <tt class="py-keyword">def</tt> <tt class="py-def-name">func</tt><tt class="py-op">(</tt><tt class="py-param">p</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1375"></a><tt class="py-lineno">1375</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">f</tt><tt class="py-op">(</tt><tt class="py-name">p</tt><tt class="py-op">,</tt> <tt id="link-487" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-487', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt><tt class="py-op">-</tt><tt class="py-name">y</tt> </tt>
</div><a name="L1376"></a><tt class="py-lineno">1376</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1377"></a><tt class="py-lineno">1377</tt>  <tt class="py-line">            <tt class="py-keyword">def</tt> <tt class="py-def-name">func</tt><tt class="py-op">(</tt><tt class="py-param">p</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1378"></a><tt class="py-lineno">1378</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">(</tt><tt class="py-name">p</tt><tt class="py-op">,</tt> <tt id="link-488" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-488', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt><tt class="py-op">-</tt><tt class="py-name">y</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">yErr</tt> </tt>
</div><a name="L1379"></a><tt class="py-lineno">1379</tt>  <tt class="py-line"> </tt>
<a name="L1380"></a><tt class="py-lineno">1380</tt>  <tt class="py-line">        <tt class="py-name">x0</tt> <tt class="py-op">=</tt> <tt class="py-name">parmTuple0</tt> </tt>
<a name="L1381"></a><tt class="py-lineno">1381</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">leastsq</tt><tt class="py-op">(</tt><tt class="py-name">func</tt><tt class="py-op">,</tt> <tt class="py-name">x0</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-name">leastsq_kwargs</tt><tt class="py-op">)</tt> </tt>
<a name="L1382"></a><tt class="py-lineno">1382</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt id="link-489" class="py-name" targets="Module Priithon.all=Priithon.all-module.html"><a title="Priithon.all" class="py-name" href="#" onclick="return doclink('link-489', 'all', 'link-489');">all</a></tt><tt class="py-op">(</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1383"></a><tt class="py-lineno">1383</tt>  <tt class="py-line">        <tt class="py-comment"># all parameters are fixed -- we don't need to fit anything here.</tt> </tt>
<a name="L1384"></a><tt class="py-lineno">1384</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-keyword">return</tt> <tt class="py-name">parmTuple0</tt><tt class="py-op">,</tt> <tt class="py-number">999</tt> </tt>
<a name="L1385"></a><tt class="py-lineno">1385</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1386"></a><tt class="py-lineno">1386</tt>  <tt class="py-line">        <tt class="py-keyword">def</tt> <tt class="py-def-name">func</tt><tt class="py-op">(</tt><tt class="py-param">p</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1387"></a><tt class="py-lineno">1387</tt>  <tt class="py-line">            <tt class="py-name">par_iHere</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L1388"></a><tt class="py-lineno">1388</tt>  <tt class="py-line">            <tt class="py-name">pp</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-name">None</tt><tt class="py-op">]</tt><tt class="py-op">*</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">parmTuple0</tt><tt class="py-op">)</tt> </tt>
<a name="L1389"></a><tt class="py-lineno">1389</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt class="py-name">par_i</tt><tt class="py-op">,</tt><tt class="py-name">par_fixed</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1390"></a><tt class="py-lineno">1390</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">par_fixed</tt><tt class="py-op">:</tt> </tt>
<a name="L1391"></a><tt class="py-lineno">1391</tt>  <tt class="py-line">                    <tt class="py-name">pp</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">parmTuple0</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> </tt>
<a name="L1392"></a><tt class="py-lineno">1392</tt>  <tt class="py-line">                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1393"></a><tt class="py-lineno">1393</tt>  <tt class="py-line">                    <tt class="py-name">pp</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-name">par_iHere</tt><tt class="py-op">]</tt> </tt>
<a name="L1394"></a><tt class="py-lineno">1394</tt>  <tt class="py-line">                    <tt class="py-name">par_iHere</tt><tt class="py-op">+=</tt><tt class="py-number">1</tt> </tt>
<a name="L1395"></a><tt class="py-lineno">1395</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">(</tt><tt class="py-name">pp</tt><tt class="py-op">,</tt> <tt id="link-490" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-490', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt><tt class="py-op">-</tt><tt class="py-name">y</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">yErr</tt> </tt>
</div><a name="L1396"></a><tt class="py-lineno">1396</tt>  <tt class="py-line">     </tt>
<a name="L1397"></a><tt class="py-lineno">1397</tt>  <tt class="py-line">        <tt class="py-name">x0</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L1398"></a><tt class="py-lineno">1398</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">par_i</tt><tt class="py-op">,</tt><tt class="py-name">par_fixed</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1399"></a><tt class="py-lineno">1399</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">par_fixed</tt><tt class="py-op">:</tt> </tt>
<a name="L1400"></a><tt class="py-lineno">1400</tt>  <tt class="py-line">                <tt class="py-name">x0</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">parmTuple0</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1401"></a><tt class="py-lineno">1401</tt>  <tt class="py-line">        <tt class="py-name">x0</tt><tt class="py-op">=</tt><tt class="py-name">tuple</tt><tt class="py-op">(</tt><tt class="py-name">x0</tt><tt class="py-op">)</tt> </tt>
<a name="L1402"></a><tt class="py-lineno">1402</tt>  <tt class="py-line"> </tt>
<a name="L1403"></a><tt class="py-lineno">1403</tt>  <tt class="py-line">        <tt class="py-name">p</tt><tt class="py-op">,</tt> <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">leastsq</tt><tt class="py-op">(</tt><tt class="py-name">func</tt><tt class="py-op">,</tt> <tt class="py-name">x0</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-name">leastsq_kwargs</tt><tt class="py-op">)</tt> </tt>
<a name="L1404"></a><tt class="py-lineno">1404</tt>  <tt class="py-line">        <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L1405"></a><tt class="py-lineno">1405</tt>  <tt class="py-line">            <tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L1406"></a><tt class="py-lineno">1406</tt>  <tt class="py-line">        <tt class="py-keyword">except</tt> <tt class="py-name">IndexError</tt><tt class="py-op">:</tt> </tt>
<a name="L1407"></a><tt class="py-lineno">1407</tt>  <tt class="py-line">            <tt class="py-name">p</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">p</tt><tt class="py-op">,</tt><tt class="py-op">)</tt>         <tt class="py-comment"># put single value (scalar) back into a tuple ...</tt> </tt>
<a name="L1408"></a><tt class="py-lineno">1408</tt>  <tt class="py-line"> </tt>
<a name="L1409"></a><tt class="py-lineno">1409</tt>  <tt class="py-line">        <tt class="py-name">par_iHere</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L1410"></a><tt class="py-lineno">1410</tt>  <tt class="py-line">        <tt class="py-name">pp</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">parmTuple0</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">float</tt><tt class="py-op">)</tt> </tt>
<a name="L1411"></a><tt class="py-lineno">1411</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">par_i</tt><tt class="py-op">,</tt><tt class="py-name">par_fixed</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1412"></a><tt class="py-lineno">1412</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">par_fixed</tt><tt class="py-op">:</tt> </tt>
<a name="L1413"></a><tt class="py-lineno">1413</tt>  <tt class="py-line">                <tt class="py-name">pp</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">parmTuple0</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> </tt>
<a name="L1414"></a><tt class="py-lineno">1414</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1415"></a><tt class="py-lineno">1415</tt>  <tt class="py-line">                <tt class="py-name">pp</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-name">par_iHere</tt><tt class="py-op">]</tt> </tt>
<a name="L1416"></a><tt class="py-lineno">1416</tt>  <tt class="py-line">                <tt class="py-name">par_iHere</tt><tt class="py-op">+=</tt><tt class="py-number">1</tt> </tt>
<a name="L1417"></a><tt class="py-lineno">1417</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">pp</tt><tt class="py-op">,</tt><tt class="py-name">r</tt>  <tt class="py-comment"># pp is N.array, like what  leastsq seems to return</tt> </tt>
</div><a name="L1418"></a><tt class="py-lineno">1418</tt>  <tt class="py-line">             </tt>
<a name="L1419"></a><tt class="py-lineno">1419</tt>  <tt class="py-line">    <tt class="py-comment">#return leastsq(func, x0)#, args=(), Dfun=None,</tt> </tt>
<a name="L1420"></a><tt class="py-lineno">1420</tt>  <tt class="py-line"><tt class="py-comment"></tt>                   <tt class="py-comment">#full_output=0, col_deriv=0,</tt> </tt>
<a name="L1421"></a><tt class="py-lineno">1421</tt>  <tt class="py-line"><tt class="py-comment"></tt>                   <tt class="py-comment">#ftol=1.49012e-08, xtol=1.49012e-08, gtol=0.0, maxfev=0, epsfcn=0.0, factor=100, diag=None)</tt> </tt>
<a name="L1422"></a><tt class="py-lineno">1422</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L1423"></a><tt class="py-lineno">1423</tt>  <tt class="py-line"> </tt>
<a name="fitAny_leftSided"></a><div id="fitAny_leftSided-def"><a name="L1424"></a><tt class="py-lineno">1424</tt> <a class="py-toggle" href="#" id="fitAny_leftSided-toggle" onclick="return toggle('fitAny_leftSided');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#fitAny_leftSided">fitAny_leftSided</a><tt class="py-op">(</tt><tt class="py-param">f</tt><tt class="py-op">,</tt> <tt class="py-param">parmTuple0</tt><tt class="py-op">,</tt> <tt class="py-param">data</tt><tt class="py-op">,</tt> <tt class="py-param">xLeftSidedOfParm</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-param">fixed_mask</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-param">leastsq_kwargs</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="fitAny_leftSided-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="fitAny_leftSided-expanded"><a name="L1425"></a><tt class="py-lineno">1425</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1426"></a><tt class="py-lineno">1426</tt>  <tt class="py-line"><tt class="py-docstring">    data should be list of (x,y)  tuples</tt> </tt>
<a name="L1427"></a><tt class="py-lineno">1427</tt>  <tt class="py-line"><tt class="py-docstring">    or (x,y,deltaY) [ weighted fitting: minimize (y(x)-x)/deltaY ]</tt> </tt>
<a name="L1428"></a><tt class="py-lineno">1428</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1429"></a><tt class="py-lineno">1429</tt>  <tt class="py-line"><tt class="py-docstring">    (instead of 'list' you can of course have an array w/</tt> </tt>
<a name="L1430"></a><tt class="py-lineno">1430</tt>  <tt class="py-line"><tt class="py-docstring">    shape=(n,2) or shape=(n,3), n beeing the number of data points</tt> </tt>
<a name="L1431"></a><tt class="py-lineno">1431</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1432"></a><tt class="py-lineno">1432</tt>  <tt class="py-line"><tt class="py-docstring">    if data.ndim == 1 or data.shape = (n,1) it fits assuming x=0,1,2,3,...n-1</tt> </tt>
<a name="L1433"></a><tt class="py-lineno">1433</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1434"></a><tt class="py-lineno">1434</tt>  <tt class="py-line"><tt class="py-docstring">    f is your 'model' function that takes two arguments:</tt> </tt>
<a name="L1435"></a><tt class="py-lineno">1435</tt>  <tt class="py-line"><tt class="py-docstring">       a tuple of parameters and x</tt> </tt>
<a name="L1436"></a><tt class="py-lineno">1436</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1437"></a><tt class="py-lineno">1437</tt>  <tt class="py-line"><tt class="py-docstring">    !!! MODEL IS ONLY OPTIMIZED FOR X&lt;`parmTuple0[xLeftSidedOfParm]` !!!</tt> </tt>
<a name="L1438"></a><tt class="py-lineno">1438</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L1439"></a><tt class="py-lineno">1439</tt>  <tt class="py-line"><tt class="py-docstring">    The function returns a list containing the optimal parameter values</tt> </tt>
<a name="L1440"></a><tt class="py-lineno">1440</tt>  <tt class="py-line"><tt class="py-docstring">    and the chi-squared value describing the quality of the fit. (CHECK if this is true)</tt> </tt>
<a name="L1441"></a><tt class="py-lineno">1441</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1442"></a><tt class="py-lineno">1442</tt>  <tt class="py-line"><tt class="py-docstring">    fixed_mask: if not None: </tt> </tt>
<a name="L1443"></a><tt class="py-lineno">1443</tt>  <tt class="py-line"><tt class="py-docstring">       this sequence of bool values determinces if the respective parameter</tt> </tt>
<a name="L1444"></a><tt class="py-lineno">1444</tt>  <tt class="py-line"><tt class="py-docstring">       shall be fixed or free to be adjusted</tt> </tt>
<a name="L1445"></a><tt class="py-lineno">1445</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1446"></a><tt class="py-lineno">1446</tt>  <tt class="py-line"><tt class="py-docstring">    leastsq_kwargs: optional arguments feed to scipy.optimize.leastsq:</tt> </tt>
<a name="L1447"></a><tt class="py-lineno">1447</tt>  <tt class="py-line"><tt class="py-docstring">       useful might be e.g.: </tt> </tt>
<a name="L1448"></a><tt class="py-lineno">1448</tt>  <tt class="py-line"><tt class="py-docstring">        * maxfev -- The maximum number of calls to the function. If zero,</tt> </tt>
<a name="L1449"></a><tt class="py-lineno">1449</tt>  <tt class="py-line"><tt class="py-docstring">           then 100*(N+1) is the maximum where N is the number</tt> </tt>
<a name="L1450"></a><tt class="py-lineno">1450</tt>  <tt class="py-line"><tt class="py-docstring">           of elements in x0.</tt> </tt>
<a name="L1451"></a><tt class="py-lineno">1451</tt>  <tt class="py-line"><tt class="py-docstring">        * full_output -- non-zero to return all optional outputs.</tt> </tt>
<a name="L1452"></a><tt class="py-lineno">1452</tt>  <tt class="py-line"><tt class="py-docstring">        * warning -- True to print a warning message when the call is</tt> </tt>
<a name="L1453"></a><tt class="py-lineno">1453</tt>  <tt class="py-line"><tt class="py-docstring">             unsuccessful; False to suppress the warning message.</tt> </tt>
<a name="L1454"></a><tt class="py-lineno">1454</tt>  <tt class="py-line"><tt class="py-docstring">        for more see scipy.optimize.leastsq</tt> </tt>
<a name="L1455"></a><tt class="py-lineno">1455</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1456"></a><tt class="py-lineno">1456</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-name">scipy</tt><tt class="py-op">.</tt><tt class="py-name">optimize</tt> <tt class="py-keyword">import</tt> <tt class="py-name">leastsq</tt> </tt>
<a name="L1457"></a><tt class="py-lineno">1457</tt>  <tt class="py-line"> </tt>
<a name="L1458"></a><tt class="py-lineno">1458</tt>  <tt class="py-line">    <tt id="link-491" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-491', 'data', 'link-464');">data</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-492" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-492', 'data', 'link-464');">data</a></tt><tt class="py-op">,</tt> <tt id="link-493" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-493', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float64</tt><tt class="py-op">)</tt> </tt>
<a name="L1459"></a><tt class="py-lineno">1459</tt>  <tt class="py-line"> </tt>
<a name="L1460"></a><tt class="py-lineno">1460</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-494" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-494', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt id="link-495" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-495', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L1461"></a><tt class="py-lineno">1461</tt>  <tt class="py-line">        <tt id="link-496" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-496', 'data', 'link-464');">data</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-497" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-497', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">arange</tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-498" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-498', 'data', 'link-464');">data</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-499" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-499', 'data', 'link-464');">data</a></tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L1462"></a><tt class="py-lineno">1462</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt id="link-500" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-500', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt id="link-501" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-501', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L1463"></a><tt class="py-lineno">1463</tt>  <tt class="py-line">        <tt id="link-502" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-502', 'data', 'link-464');">data</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-503" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-503', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">arange</tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-504" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-504', 'data', 'link-464');">data</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-505" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-505', 'data', 'link-464');">data</a></tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L1464"></a><tt class="py-lineno">1464</tt>  <tt class="py-line"> </tt>
<a name="L1465"></a><tt class="py-lineno">1465</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-506" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-506', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt id="link-507" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-507', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">2</tt><tt class="py-op">:</tt>   <tt class="py-comment"># x,y tuples</tt> </tt>
<a name="L1466"></a><tt class="py-lineno">1466</tt>  <tt class="py-line">        <tt id="link-508" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-508', 'x', 'link-481');">x</a></tt><tt class="py-op">,</tt><tt class="py-name">y</tt> <tt class="py-op">=</tt> <tt id="link-509" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-509', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt class="py-name">T</tt> </tt>
<a name="L1467"></a><tt class="py-lineno">1467</tt>  <tt class="py-line">        <tt class="py-name">yErr</tt> <tt class="py-op">=</tt> <tt class="py-number">1</tt> </tt>
<a name="L1468"></a><tt class="py-lineno">1468</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt id="link-510" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-510', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt id="link-511" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-511', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">3</tt><tt class="py-op">:</tt> <tt class="py-comment"># x,y,err tuples (weigthed fitting)</tt> </tt>
<a name="L1469"></a><tt class="py-lineno">1469</tt>  <tt class="py-line">        <tt id="link-512" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-512', 'x', 'link-481');">x</a></tt><tt class="py-op">,</tt><tt class="py-name">y</tt><tt class="py-op">,</tt><tt class="py-name">yErr</tt> <tt class="py-op">=</tt> <tt id="link-513" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-513', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt class="py-name">T</tt> </tt>
<a name="L1470"></a><tt class="py-lineno">1470</tt>  <tt class="py-line"> </tt>
<a name="L1471"></a><tt class="py-lineno">1471</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">fixed_mask</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1472"></a><tt class="py-lineno">1472</tt>  <tt class="py-line">        <tt class="py-comment"># just in case fixed_mask is too long for parmTuple</tt> </tt>
<a name="L1473"></a><tt class="py-lineno">1473</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-name">fixed_mask</tt> <tt class="py-op">=</tt> <tt class="py-name">fixed_mask</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">parmTuple0</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L1474"></a><tt class="py-lineno">1474</tt>  <tt class="py-line"> </tt>
<a name="L1475"></a><tt class="py-lineno">1475</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">fixed_mask</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">or</tt> <tt class="py-keyword">not</tt> <tt class="py-name">any</tt><tt class="py-op">(</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1476"></a><tt class="py-lineno">1476</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">yErr</tt> <tt class="py-keyword">is</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L1477"></a><tt class="py-lineno">1477</tt>  <tt class="py-line">            <tt class="py-keyword">def</tt> <tt class="py-def-name">func</tt><tt class="py-op">(</tt><tt class="py-param">p</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1478"></a><tt class="py-lineno">1478</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt id="link-514" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-514', 'x', 'link-481');">x</a></tt><tt class="py-op">&lt;=</tt><tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-name">xLeftSidedOfParm</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">(</tt><tt class="py-name">p</tt><tt class="py-op">,</tt> <tt id="link-515" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-515', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt><tt class="py-op">-</tt><tt class="py-name">y</tt><tt class="py-op">)</tt> </tt>
</div><a name="L1479"></a><tt class="py-lineno">1479</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1480"></a><tt class="py-lineno">1480</tt>  <tt class="py-line">            <tt class="py-keyword">def</tt> <tt class="py-def-name">func</tt><tt class="py-op">(</tt><tt class="py-param">p</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1481"></a><tt class="py-lineno">1481</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt id="link-516" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-516', 'x', 'link-481');">x</a></tt><tt class="py-op">&lt;=</tt><tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-name">xLeftSidedOfParm</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">(</tt><tt class="py-name">p</tt><tt class="py-op">,</tt> <tt id="link-517" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-517', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt><tt class="py-op">-</tt><tt class="py-name">y</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">yErr</tt><tt class="py-op">)</tt> </tt>
</div><a name="L1482"></a><tt class="py-lineno">1482</tt>  <tt class="py-line"> </tt>
<a name="L1483"></a><tt class="py-lineno">1483</tt>  <tt class="py-line">        <tt class="py-name">x0</tt> <tt class="py-op">=</tt> <tt class="py-name">parmTuple0</tt> </tt>
<a name="L1484"></a><tt class="py-lineno">1484</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">leastsq</tt><tt class="py-op">(</tt><tt class="py-name">func</tt><tt class="py-op">,</tt> <tt class="py-name">x0</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-name">leastsq_kwargs</tt><tt class="py-op">)</tt> </tt>
<a name="L1485"></a><tt class="py-lineno">1485</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt id="link-518" class="py-name"><a title="Priithon.all" class="py-name" href="#" onclick="return doclink('link-518', 'all', 'link-489');">all</a></tt><tt class="py-op">(</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1486"></a><tt class="py-lineno">1486</tt>  <tt class="py-line">        <tt class="py-comment"># all parameters are fixed -- we don't need to fit anything here.</tt> </tt>
<a name="L1487"></a><tt class="py-lineno">1487</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-keyword">return</tt> <tt class="py-name">parmTuple0</tt><tt class="py-op">,</tt> <tt class="py-number">999</tt> </tt>
<a name="L1488"></a><tt class="py-lineno">1488</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1489"></a><tt class="py-lineno">1489</tt>  <tt class="py-line">        <tt class="py-keyword">def</tt> <tt class="py-def-name">func</tt><tt class="py-op">(</tt><tt class="py-param">p</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1490"></a><tt class="py-lineno">1490</tt>  <tt class="py-line">            <tt class="py-name">par_iHere</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L1491"></a><tt class="py-lineno">1491</tt>  <tt class="py-line">            <tt class="py-name">pp</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-name">None</tt><tt class="py-op">]</tt><tt class="py-op">*</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">parmTuple0</tt><tt class="py-op">)</tt> </tt>
<a name="L1492"></a><tt class="py-lineno">1492</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt class="py-name">par_i</tt><tt class="py-op">,</tt><tt class="py-name">par_fixed</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1493"></a><tt class="py-lineno">1493</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">par_fixed</tt><tt class="py-op">:</tt> </tt>
<a name="L1494"></a><tt class="py-lineno">1494</tt>  <tt class="py-line">                    <tt class="py-name">pp</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">parmTuple0</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> </tt>
<a name="L1495"></a><tt class="py-lineno">1495</tt>  <tt class="py-line">                <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1496"></a><tt class="py-lineno">1496</tt>  <tt class="py-line">                    <tt class="py-name">pp</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-name">par_iHere</tt><tt class="py-op">]</tt> </tt>
<a name="L1497"></a><tt class="py-lineno">1497</tt>  <tt class="py-line">                    <tt class="py-name">par_iHere</tt><tt class="py-op">+=</tt><tt class="py-number">1</tt> </tt>
<a name="L1498"></a><tt class="py-lineno">1498</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt id="link-519" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-519', 'x', 'link-481');">x</a></tt><tt class="py-op">&lt;=</tt><tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-name">xLeftSidedOfParm</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">(</tt><tt class="py-name">pp</tt><tt class="py-op">,</tt> <tt id="link-520" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-520', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt><tt class="py-op">-</tt><tt class="py-name">y</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">yErr</tt><tt class="py-op">)</tt> </tt>
</div><a name="L1499"></a><tt class="py-lineno">1499</tt>  <tt class="py-line">     </tt>
<a name="L1500"></a><tt class="py-lineno">1500</tt>  <tt class="py-line">        <tt class="py-name">x0</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L1501"></a><tt class="py-lineno">1501</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">par_i</tt><tt class="py-op">,</tt><tt class="py-name">par_fixed</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1502"></a><tt class="py-lineno">1502</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">par_fixed</tt><tt class="py-op">:</tt> </tt>
<a name="L1503"></a><tt class="py-lineno">1503</tt>  <tt class="py-line">                <tt class="py-name">x0</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">parmTuple0</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1504"></a><tt class="py-lineno">1504</tt>  <tt class="py-line">        <tt class="py-name">x0</tt><tt class="py-op">=</tt><tt class="py-name">tuple</tt><tt class="py-op">(</tt><tt class="py-name">x0</tt><tt class="py-op">)</tt> </tt>
<a name="L1505"></a><tt class="py-lineno">1505</tt>  <tt class="py-line"> </tt>
<a name="L1506"></a><tt class="py-lineno">1506</tt>  <tt class="py-line">        <tt class="py-name">p</tt><tt class="py-op">,</tt> <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">leastsq</tt><tt class="py-op">(</tt><tt class="py-name">func</tt><tt class="py-op">,</tt> <tt class="py-name">x0</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-name">leastsq_kwargs</tt><tt class="py-op">)</tt> </tt>
<a name="L1507"></a><tt class="py-lineno">1507</tt>  <tt class="py-line">        <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L1508"></a><tt class="py-lineno">1508</tt>  <tt class="py-line">            <tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L1509"></a><tt class="py-lineno">1509</tt>  <tt class="py-line">        <tt class="py-keyword">except</tt> <tt class="py-name">IndexError</tt><tt class="py-op">:</tt> </tt>
<a name="L1510"></a><tt class="py-lineno">1510</tt>  <tt class="py-line">            <tt class="py-name">p</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">p</tt><tt class="py-op">,</tt><tt class="py-op">)</tt>         <tt class="py-comment"># put single value (scalar) back into a tuple ...</tt> </tt>
<a name="L1511"></a><tt class="py-lineno">1511</tt>  <tt class="py-line"> </tt>
<a name="L1512"></a><tt class="py-lineno">1512</tt>  <tt class="py-line">        <tt class="py-name">par_iHere</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L1513"></a><tt class="py-lineno">1513</tt>  <tt class="py-line">        <tt class="py-name">pp</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">parmTuple0</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">float</tt><tt class="py-op">)</tt> </tt>
<a name="L1514"></a><tt class="py-lineno">1514</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">par_i</tt><tt class="py-op">,</tt><tt class="py-name">par_fixed</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1515"></a><tt class="py-lineno">1515</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">par_fixed</tt><tt class="py-op">:</tt> </tt>
<a name="L1516"></a><tt class="py-lineno">1516</tt>  <tt class="py-line">                <tt class="py-name">pp</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">parmTuple0</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> </tt>
<a name="L1517"></a><tt class="py-lineno">1517</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1518"></a><tt class="py-lineno">1518</tt>  <tt class="py-line">                <tt class="py-name">pp</tt><tt class="py-op">[</tt><tt class="py-name">par_i</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-name">par_iHere</tt><tt class="py-op">]</tt> </tt>
<a name="L1519"></a><tt class="py-lineno">1519</tt>  <tt class="py-line">                <tt class="py-name">par_iHere</tt><tt class="py-op">+=</tt><tt class="py-number">1</tt> </tt>
<a name="L1520"></a><tt class="py-lineno">1520</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">pp</tt><tt class="py-op">,</tt><tt class="py-name">r</tt>  <tt class="py-comment"># pp is N.array, like what  leastsq seems to return</tt> </tt>
</div><a name="L1521"></a><tt class="py-lineno">1521</tt>  <tt class="py-line"> </tt>
<a name="L1522"></a><tt class="py-lineno">1522</tt>  <tt class="py-line"> </tt>
<a name="L1523"></a><tt class="py-lineno">1523</tt>  <tt class="py-line"> </tt>
<a name="L1524"></a><tt class="py-lineno">1524</tt>  <tt class="py-line"> </tt>
<a name="L1525"></a><tt class="py-lineno">1525</tt>  <tt class="py-line"> </tt>
<a name="L1526"></a><tt class="py-lineno">1526</tt>  <tt class="py-line">     </tt>
<a name="fitDecay"></a><div id="fitDecay-def"><a name="L1527"></a><tt class="py-lineno">1527</tt> <a class="py-toggle" href="#" id="fitDecay-toggle" onclick="return toggle('fitDecay');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#fitDecay">fitDecay</a><tt class="py-op">(</tt><tt class="py-param">data</tt><tt class="py-op">,</tt> <tt class="py-param">p</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">1000</tt><tt class="py-op">,</tt><tt class="py-number">10000</tt><tt class="py-op">,</tt><tt class="py-number">10</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-param">fixed_mask</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-param">leastsq_kwargs</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="fitDecay-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="fitDecay-expanded"><a name="L1528"></a><tt class="py-lineno">1528</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1529"></a><tt class="py-lineno">1529</tt>  <tt class="py-line"><tt class="py-docstring">    see yDecay.</tt> </tt>
<a name="L1530"></a><tt class="py-lineno">1530</tt>  <tt class="py-line"><tt class="py-docstring">    p: initial guess</tt> </tt>
<a name="L1531"></a><tt class="py-lineno">1531</tt>  <tt class="py-line"><tt class="py-docstring">    data: vector of data points to be fit</tt> </tt>
<a name="L1532"></a><tt class="py-lineno">1532</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1533"></a><tt class="py-lineno">1533</tt>  <tt class="py-line"><tt class="py-docstring">    if fixed_mask is not None: </tt> </tt>
<a name="L1534"></a><tt class="py-lineno">1534</tt>  <tt class="py-line"><tt class="py-docstring">       this sequence of bool values determinces if the respective parameter</tt> </tt>
<a name="L1535"></a><tt class="py-lineno">1535</tt>  <tt class="py-line"><tt class="py-docstring">       shall be fixed or free to be adjusted</tt> </tt>
<a name="L1536"></a><tt class="py-lineno">1536</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1537"></a><tt class="py-lineno">1537</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-521" class="py-name" targets="Function Priithon.useful.fitAny()=Priithon.useful-module.html#fitAny"><a title="Priithon.useful.fitAny" class="py-name" href="#" onclick="return doclink('link-521', 'fitAny', 'link-521');">fitAny</a></tt><tt class="py-op">(</tt><tt id="link-522" class="py-name" targets="Function Priithon.useful.yDecay()=Priithon.useful-module.html#yDecay"><a title="Priithon.useful.yDecay" class="py-name" href="#" onclick="return doclink('link-522', 'yDecay', 'link-522');">yDecay</a></tt><tt class="py-op">,</tt> <tt class="py-name">p</tt><tt class="py-op">,</tt> <tt id="link-523" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-523', 'data', 'link-464');">data</a></tt><tt class="py-op">,</tt> <tt class="py-name">fixed_mask</tt><tt class="py-op">=</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-name">leastsq_kwargs</tt><tt class="py-op">)</tt> </tt>
</div><a name="L1538"></a><tt class="py-lineno">1538</tt>  <tt class="py-line"> </tt>
<a name="fitGaussian"></a><div id="fitGaussian-def"><a name="L1539"></a><tt class="py-lineno">1539</tt> <a class="py-toggle" href="#" id="fitGaussian-toggle" onclick="return toggle('fitGaussian');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#fitGaussian">fitGaussian</a><tt class="py-op">(</tt><tt class="py-param">data</tt><tt class="py-op">,</tt> <tt class="py-param">p</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">10</tt><tt class="py-op">,</tt><tt class="py-number">100</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-param">fixed_mask</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-param">leastsq_kwargs</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="fitGaussian-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="fitGaussian-expanded"><a name="L1540"></a><tt class="py-lineno">1540</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1541"></a><tt class="py-lineno">1541</tt>  <tt class="py-line"><tt class="py-docstring">    see yGaussian.</tt> </tt>
<a name="L1542"></a><tt class="py-lineno">1542</tt>  <tt class="py-line"><tt class="py-docstring">    p: initial guess</tt> </tt>
<a name="L1543"></a><tt class="py-lineno">1543</tt>  <tt class="py-line"><tt class="py-docstring">    data: vector of data points to be fit</tt> </tt>
<a name="L1544"></a><tt class="py-lineno">1544</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1545"></a><tt class="py-lineno">1545</tt>  <tt class="py-line"><tt class="py-docstring">    if fixed_mask is not None: </tt> </tt>
<a name="L1546"></a><tt class="py-lineno">1546</tt>  <tt class="py-line"><tt class="py-docstring">       this sequence of bool values determinces if the respective parameter</tt> </tt>
<a name="L1547"></a><tt class="py-lineno">1547</tt>  <tt class="py-line"><tt class="py-docstring">       shall be fixed or free to be adjusted</tt> </tt>
<a name="L1548"></a><tt class="py-lineno">1548</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1549"></a><tt class="py-lineno">1549</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-524" class="py-name"><a title="Priithon.useful.fitAny" class="py-name" href="#" onclick="return doclink('link-524', 'fitAny', 'link-521');">fitAny</a></tt><tt class="py-op">(</tt><tt id="link-525" class="py-name" targets="Function Priithon.useful.yGaussian()=Priithon.useful-module.html#yGaussian"><a title="Priithon.useful.yGaussian" class="py-name" href="#" onclick="return doclink('link-525', 'yGaussian', 'link-525');">yGaussian</a></tt><tt class="py-op">,</tt> <tt class="py-name">p</tt><tt class="py-op">,</tt> <tt id="link-526" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-526', 'data', 'link-464');">data</a></tt><tt class="py-op">,</tt> <tt class="py-name">fixed_mask</tt><tt class="py-op">=</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-name">leastsq_kwargs</tt><tt class="py-op">)</tt> </tt>
</div><a name="L1550"></a><tt class="py-lineno">1550</tt>  <tt class="py-line"><tt class="py-comment">#     from scipy.optimize import leastsq</tt> </tt>
<a name="L1551"></a><tt class="py-lineno">1551</tt>  <tt class="py-line"><tt class="py-comment"></tt>     </tt>
<a name="L1552"></a><tt class="py-lineno">1552</tt>  <tt class="py-line"><tt class="py-comment">#     n = len(y)</tt> </tt>
<a name="L1553"></a><tt class="py-lineno">1553</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#     x = N.arange(n)</tt> </tt>
<a name="L1554"></a><tt class="py-lineno">1554</tt>  <tt class="py-line"><tt class="py-comment"></tt>     </tt>
<a name="L1555"></a><tt class="py-lineno">1555</tt>  <tt class="py-line"><tt class="py-comment">#     def func(p):</tt> </tt>
<a name="L1556"></a><tt class="py-lineno">1556</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#         return yDecay(p, x)-y</tt> </tt>
<a name="L1557"></a><tt class="py-lineno">1557</tt>  <tt class="py-line"><tt class="py-comment"></tt>     </tt>
<a name="L1558"></a><tt class="py-lineno">1558</tt>  <tt class="py-line"><tt class="py-comment">#     x0 = p</tt> </tt>
<a name="L1559"></a><tt class="py-lineno">1559</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#     return leastsq(func, x0)#, args=(), Dfun=None,</tt> </tt>
<a name="L1560"></a><tt class="py-lineno">1560</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#                    #full_output=0, col_deriv=0,</tt> </tt>
<a name="L1561"></a><tt class="py-lineno">1561</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#                    #ftol=1.49012e-08, xtol=1.49012e-08, gtol=0.0, maxfev=0, epsfcn=0.0, factor=100, diag=None)</tt> </tt>
<a name="L1562"></a><tt class="py-lineno">1562</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L1563"></a><tt class="py-lineno">1563</tt>  <tt class="py-line"> </tt>
<a name="fitPoly"></a><div id="fitPoly-def"><a name="L1564"></a><tt class="py-lineno">1564</tt> <a class="py-toggle" href="#" id="fitPoly-toggle" onclick="return toggle('fitPoly');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#fitPoly">fitPoly</a><tt class="py-op">(</tt><tt class="py-param">data</tt><tt class="py-op">,</tt> <tt class="py-param">p</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-param">fixed_mask</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-param">leastsq_kwargs</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="fitPoly-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="fitPoly-expanded"><a name="L1565"></a><tt class="py-lineno">1565</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1566"></a><tt class="py-lineno">1566</tt>  <tt class="py-line"><tt class="py-docstring">    see yPoly</tt> </tt>
<a name="L1567"></a><tt class="py-lineno">1567</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1568"></a><tt class="py-lineno">1568</tt>  <tt class="py-line"><tt class="py-docstring">    data should be list of y or (x,y)- or (x,y,deltaY)-tuples</tt> </tt>
<a name="L1569"></a><tt class="py-lineno">1569</tt>  <tt class="py-line"><tt class="py-docstring">    (instead of 'list' you can of course have an array w/</tt> </tt>
<a name="L1570"></a><tt class="py-lineno">1570</tt>  <tt class="py-line"><tt class="py-docstring">    shape=(n,2) or shape=(n,3), n beeing the number of data points</tt> </tt>
<a name="L1571"></a><tt class="py-lineno">1571</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1572"></a><tt class="py-lineno">1572</tt>  <tt class="py-line"><tt class="py-docstring">    uses polynomial 'model' ( U.yPoly )</tt> </tt>
<a name="L1573"></a><tt class="py-lineno">1573</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L1574"></a><tt class="py-lineno">1574</tt>  <tt class="py-line"><tt class="py-docstring">    The function returns a list containing the optimal parameter values</tt> </tt>
<a name="L1575"></a><tt class="py-lineno">1575</tt>  <tt class="py-line"><tt class="py-docstring">    and the chi-squared value describing the quality of the fit.</tt> </tt>
<a name="L1576"></a><tt class="py-lineno">1576</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1577"></a><tt class="py-lineno">1577</tt>  <tt class="py-line"><tt class="py-docstring">    if fixed_mask is not None: </tt> </tt>
<a name="L1578"></a><tt class="py-lineno">1578</tt>  <tt class="py-line"><tt class="py-docstring">       this sequence of bool values determinces if the respective parameter</tt> </tt>
<a name="L1579"></a><tt class="py-lineno">1579</tt>  <tt class="py-line"><tt class="py-docstring">       shall be fixed or free to be adjusted</tt> </tt>
<a name="L1580"></a><tt class="py-lineno">1580</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1581"></a><tt class="py-lineno">1581</tt>  <tt class="py-line"> </tt>
<a name="L1582"></a><tt class="py-lineno">1582</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-527" class="py-name"><a title="Priithon.useful.fitAny" class="py-name" href="#" onclick="return doclink('link-527', 'fitAny', 'link-521');">fitAny</a></tt><tt class="py-op">(</tt><tt id="link-528" class="py-name" targets="Function Priithon.useful.yPoly()=Priithon.useful-module.html#yPoly"><a title="Priithon.useful.yPoly" class="py-name" href="#" onclick="return doclink('link-528', 'yPoly', 'link-528');">yPoly</a></tt><tt class="py-op">,</tt> <tt class="py-name">p</tt><tt class="py-op">,</tt> <tt id="link-529" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-529', 'data', 'link-464');">data</a></tt><tt class="py-op">,</tt> <tt class="py-name">fixed_mask</tt><tt class="py-op">=</tt><tt class="py-name">fixed_mask</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-name">leastsq_kwargs</tt><tt class="py-op">)</tt> </tt>
</div><a name="L1583"></a><tt class="py-lineno">1583</tt>  <tt class="py-line"> </tt>
<a name="L1584"></a><tt class="py-lineno">1584</tt>  <tt class="py-line"> </tt>
<a name="L1585"></a><tt class="py-lineno">1585</tt>  <tt class="py-line"> </tt>
<a name="L1586"></a><tt class="py-lineno">1586</tt>  <tt class="py-line"> </tt>
<a name="L1587"></a><tt class="py-lineno">1587</tt>  <tt class="py-line"> </tt>
<a name="L1588"></a><tt class="py-lineno">1588</tt>  <tt class="py-line"> </tt>
<a name="L1589"></a><tt class="py-lineno">1589</tt>  <tt class="py-line"> </tt>
<a name="L1590"></a><tt class="py-lineno">1590</tt>  <tt class="py-line"> </tt>
<a name="L1591"></a><tt class="py-lineno">1591</tt>  <tt class="py-line"> </tt>
<a name="L1592"></a><tt class="py-lineno">1592</tt>  <tt class="py-line"> </tt>
<a name="L1593"></a><tt class="py-lineno">1593</tt>  <tt class="py-line"> </tt>
<a name="L1594"></a><tt class="py-lineno">1594</tt>  <tt class="py-line"> </tt>
<a name="L1595"></a><tt class="py-lineno">1595</tt>  <tt class="py-line"> </tt>
<a name="L1596"></a><tt class="py-lineno">1596</tt>  <tt class="py-line"> </tt>
<a name="L1597"></a><tt class="py-lineno">1597</tt>  <tt class="py-line"> </tt>
<a name="L1598"></a><tt class="py-lineno">1598</tt>  <tt class="py-line"> </tt>
<a name="L1599"></a><tt class="py-lineno">1599</tt>  <tt class="py-line"> </tt>
<a name="L1600"></a><tt class="py-lineno">1600</tt>  <tt class="py-line"> </tt>
<a name="L1601"></a><tt class="py-lineno">1601</tt>  <tt class="py-line"> </tt>
<a name="L1602"></a><tt class="py-lineno">1602</tt>  <tt class="py-line"> </tt>
<a name="L1603"></a><tt class="py-lineno">1603</tt>  <tt class="py-line"> </tt>
<a name="L1604"></a><tt class="py-lineno">1604</tt>  <tt class="py-line"> </tt>
<a name="L1605"></a><tt class="py-lineno">1605</tt>  <tt class="py-line"> </tt>
<a name="L1606"></a><tt class="py-lineno">1606</tt>  <tt class="py-line"><tt id="link-530" class="py-name" targets="Variable Priithon.useful._U_nd_extra_doc_=Priithon.useful-module.html#_U_nd_extra_doc_"><a title="Priithon.useful._U_nd_extra_doc_" class="py-name" href="#" onclick="return doclink('link-530', '_U_nd_extra_doc_', 'link-530');">_U_nd_extra_doc_</a></tt> <tt class="py-op">=</tt><tt class="py-string">"""</tt> </tt>
<a name="L1607"></a><tt class="py-lineno">1607</tt>  <tt class="py-line"><tt class="py-string">Seb: this is from scipy.ndimage, but returns ndarray and</tt> </tt>
<a name="L1608"></a><tt class="py-lineno">1608</tt>  <tt class="py-line"><tt class="py-string">fixes return value type &amp; shape</tt> </tt>
<a name="L1609"></a><tt class="py-lineno">1609</tt>  <tt class="py-line"><tt class="py-string">for the cases  len(index) == 1 and len(index) == 0</tt> </tt>
<a name="L1610"></a><tt class="py-lineno">1610</tt>  <tt class="py-line"><tt class="py-string">"""</tt> </tt>
<a name="L1611"></a><tt class="py-lineno">1611</tt>  <tt class="py-line"> </tt>
<a name="L1612"></a><tt class="py-lineno">1612</tt>  <tt class="py-line"> </tt>
<a name="nd__center_of_mass"></a><div id="nd__center_of_mass-def"><a name="L1613"></a><tt class="py-lineno">1613</tt> <a class="py-toggle" href="#" id="nd__center_of_mass-toggle" onclick="return toggle('nd__center_of_mass');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#nd__center_of_mass">nd__center_of_mass</a><tt class="py-op">(</tt><tt class="py-param">input</tt><tt class="py-op">,</tt> <tt class="py-param">labels</tt> <tt class="py-op">=</tt> <tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">index</tt> <tt class="py-op">=</tt> <tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="nd__center_of_mass-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="nd__center_of_mass-expanded"><a name="L1614"></a><tt class="py-lineno">1614</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1615"></a><tt class="py-lineno">1615</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1616"></a><tt class="py-lineno">1616</tt>  <tt class="py-line">    <tt class="py-name">ll</tt> <tt class="py-op">=</tt> <tt class="py-name">hasattr</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">,</tt> <tt class="py-string">"__len__"</tt><tt class="py-op">)</tt> </tt>
<a name="L1617"></a><tt class="py-lineno">1617</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ll</tt> <tt class="py-keyword">and</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L1618"></a><tt class="py-lineno">1618</tt>  <tt class="py-line">        <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1619"></a><tt class="py-lineno">1619</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">.</tt><tt id="link-531" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-531', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-name">input</tt><tt class="py-op">.</tt><tt id="link-532" class="py-name" targets="Variable Priithon.mockNDarray.mockNDarray.ndim=Priithon.mockNDarray.mockNDarray-class.html#ndim"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-532', 'ndim', 'link-532');">ndim</a></tt> </tt>
<a name="L1620"></a><tt class="py-lineno">1620</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
<a name="L1621"></a><tt class="py-lineno">1621</tt>  <tt class="py-line">    <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt class="py-name">center_of_mass</tt><tt class="py-op">(</tt><tt class="py-name">input</tt><tt class="py-op">,</tt> <tt class="py-name">labels</tt><tt class="py-op">,</tt> <tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L1622"></a><tt class="py-lineno">1622</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ll</tt> <tt class="py-keyword">and</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L1623"></a><tt class="py-lineno">1623</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">.</tt><tt id="link-533" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-533', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1624"></a><tt class="py-lineno">1624</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
</div><a name="L1625"></a><tt class="py-lineno">1625</tt>  <tt class="py-line"><tt id="link-534" class="py-name" targets="Function Priithon.useful.nd__center_of_mass()=Priithon.useful-module.html#nd__center_of_mass"><a title="Priithon.useful.nd__center_of_mass" class="py-name" href="#" onclick="return doclink('link-534', 'nd__center_of_mass', 'link-534');">nd__center_of_mass</a></tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">=</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt class="py-name">center_of_mass</tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">+</tt> <tt id="link-535" class="py-name"><a title="Priithon.useful._U_nd_extra_doc_" class="py-name" href="#" onclick="return doclink('link-535', '_U_nd_extra_doc_', 'link-530');">_U_nd_extra_doc_</a></tt> </tt>
<a name="L1626"></a><tt class="py-lineno">1626</tt>  <tt class="py-line"> </tt>
<a name="L1627"></a><tt class="py-lineno">1627</tt>  <tt class="py-line"> </tt>
<a name="L1628"></a><tt class="py-lineno">1628</tt>  <tt class="py-line"><tt class="py-comment">#         r = [ r ]</tt> </tt>
<a name="L1629"></a><tt class="py-lineno">1629</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#     return N.array( r )</tt> </tt>
<a name="nd__maximum_position"></a><div id="nd__maximum_position-def"><a name="L1630"></a><tt class="py-lineno">1630</tt> <a class="py-toggle" href="#" id="nd__maximum_position-toggle" onclick="return toggle('nd__maximum_position');">-</a><tt class="py-line"><tt class="py-comment"></tt><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#nd__maximum_position">nd__maximum_position</a><tt class="py-op">(</tt><tt class="py-param">input</tt><tt class="py-op">,</tt> <tt class="py-param">labels</tt> <tt class="py-op">=</tt> <tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">index</tt> <tt class="py-op">=</tt> <tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="nd__maximum_position-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="nd__maximum_position-expanded"><a name="L1631"></a><tt class="py-lineno">1631</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1632"></a><tt class="py-lineno">1632</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1633"></a><tt class="py-lineno">1633</tt>  <tt class="py-line">    <tt class="py-name">ll</tt> <tt class="py-op">=</tt> <tt class="py-name">hasattr</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">,</tt> <tt class="py-string">"__len__"</tt><tt class="py-op">)</tt> </tt>
<a name="L1634"></a><tt class="py-lineno">1634</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ll</tt> <tt class="py-keyword">and</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L1635"></a><tt class="py-lineno">1635</tt>  <tt class="py-line">        <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1636"></a><tt class="py-lineno">1636</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">.</tt><tt id="link-536" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-536', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-name">input</tt><tt class="py-op">.</tt><tt id="link-537" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-537', 'ndim', 'link-532');">ndim</a></tt> </tt>
<a name="L1637"></a><tt class="py-lineno">1637</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
<a name="L1638"></a><tt class="py-lineno">1638</tt>  <tt class="py-line">    <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt class="py-name">maximum_position</tt><tt class="py-op">(</tt><tt class="py-name">input</tt><tt class="py-op">,</tt> <tt class="py-name">labels</tt><tt class="py-op">,</tt> <tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L1639"></a><tt class="py-lineno">1639</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ll</tt> <tt class="py-keyword">and</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L1640"></a><tt class="py-lineno">1640</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">.</tt><tt id="link-538" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-538', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1641"></a><tt class="py-lineno">1641</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
</div><a name="L1642"></a><tt class="py-lineno">1642</tt>  <tt class="py-line"><tt class="py-comment">#         r = [ r ]</tt> </tt>
<a name="L1643"></a><tt class="py-lineno">1643</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#     return N.array( r )</tt> </tt>
<a name="L1644"></a><tt class="py-lineno">1644</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt id="link-539" class="py-name" targets="Function Priithon.useful.nd__maximum_position()=Priithon.useful-module.html#nd__maximum_position"><a title="Priithon.useful.nd__maximum_position" class="py-name" href="#" onclick="return doclink('link-539', 'nd__maximum_position', 'link-539');">nd__maximum_position</a></tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">=</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt class="py-name">maximum_position</tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">+</tt> <tt id="link-540" class="py-name"><a title="Priithon.useful._U_nd_extra_doc_" class="py-name" href="#" onclick="return doclink('link-540', '_U_nd_extra_doc_', 'link-530');">_U_nd_extra_doc_</a></tt> </tt>
<a name="L1645"></a><tt class="py-lineno">1645</tt>  <tt class="py-line"> </tt>
<a name="nd__minimum_position"></a><div id="nd__minimum_position-def"><a name="L1646"></a><tt class="py-lineno">1646</tt> <a class="py-toggle" href="#" id="nd__minimum_position-toggle" onclick="return toggle('nd__minimum_position');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#nd__minimum_position">nd__minimum_position</a><tt class="py-op">(</tt><tt class="py-param">input</tt><tt class="py-op">,</tt> <tt class="py-param">labels</tt> <tt class="py-op">=</tt> <tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">index</tt> <tt class="py-op">=</tt> <tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="nd__minimum_position-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="nd__minimum_position-expanded"><a name="L1647"></a><tt class="py-lineno">1647</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1648"></a><tt class="py-lineno">1648</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1649"></a><tt class="py-lineno">1649</tt>  <tt class="py-line">    <tt class="py-name">ll</tt> <tt class="py-op">=</tt> <tt class="py-name">hasattr</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">,</tt> <tt class="py-string">"__len__"</tt><tt class="py-op">)</tt> </tt>
<a name="L1650"></a><tt class="py-lineno">1650</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ll</tt> <tt class="py-keyword">and</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L1651"></a><tt class="py-lineno">1651</tt>  <tt class="py-line">        <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1652"></a><tt class="py-lineno">1652</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">.</tt><tt id="link-541" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-541', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-name">input</tt><tt class="py-op">.</tt><tt id="link-542" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-542', 'ndim', 'link-532');">ndim</a></tt> </tt>
<a name="L1653"></a><tt class="py-lineno">1653</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
<a name="L1654"></a><tt class="py-lineno">1654</tt>  <tt class="py-line">    <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt class="py-name">minimum_position</tt><tt class="py-op">(</tt><tt class="py-name">input</tt><tt class="py-op">,</tt> <tt class="py-name">labels</tt><tt class="py-op">,</tt> <tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L1655"></a><tt class="py-lineno">1655</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ll</tt> <tt class="py-keyword">and</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L1656"></a><tt class="py-lineno">1656</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">.</tt><tt id="link-543" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-543', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1657"></a><tt class="py-lineno">1657</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
</div><a name="L1658"></a><tt class="py-lineno">1658</tt>  <tt class="py-line"><tt class="py-comment">#         r = [ r ]</tt> </tt>
<a name="L1659"></a><tt class="py-lineno">1659</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#     return N.array( r )</tt> </tt>
<a name="L1660"></a><tt class="py-lineno">1660</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt id="link-544" class="py-name" targets="Function Priithon.useful.nd__minimum_position()=Priithon.useful-module.html#nd__minimum_position"><a title="Priithon.useful.nd__minimum_position" class="py-name" href="#" onclick="return doclink('link-544', 'nd__minimum_position', 'link-544');">nd__minimum_position</a></tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">=</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt class="py-name">minimum_position</tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">+</tt> <tt id="link-545" class="py-name"><a title="Priithon.useful._U_nd_extra_doc_" class="py-name" href="#" onclick="return doclink('link-545', '_U_nd_extra_doc_', 'link-530');">_U_nd_extra_doc_</a></tt> </tt>
<a name="L1661"></a><tt class="py-lineno">1661</tt>  <tt class="py-line"> </tt>
<a name="nd__sum"></a><div id="nd__sum-def"><a name="L1662"></a><tt class="py-lineno">1662</tt> <a class="py-toggle" href="#" id="nd__sum-toggle" onclick="return toggle('nd__sum');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#nd__sum">nd__sum</a><tt class="py-op">(</tt><tt class="py-param">input</tt><tt class="py-op">,</tt> <tt class="py-param">labels</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">index</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="nd__sum-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="nd__sum-expanded"><a name="L1663"></a><tt class="py-lineno">1663</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1664"></a><tt class="py-lineno">1664</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1665"></a><tt class="py-lineno">1665</tt>  <tt class="py-line">    <tt class="py-name">ll</tt> <tt class="py-op">=</tt> <tt class="py-name">hasattr</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">,</tt> <tt class="py-string">"__len__"</tt><tt class="py-op">)</tt> </tt>
<a name="L1666"></a><tt class="py-lineno">1666</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ll</tt> <tt class="py-keyword">and</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L1667"></a><tt class="py-lineno">1667</tt>  <tt class="py-line">        <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L1668"></a><tt class="py-lineno">1668</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">.</tt><tt id="link-546" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-546', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L1669"></a><tt class="py-lineno">1669</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
<a name="L1670"></a><tt class="py-lineno">1670</tt>  <tt class="py-line">    <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-name">input</tt><tt class="py-op">,</tt> <tt class="py-name">labels</tt><tt class="py-op">,</tt> <tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L1671"></a><tt class="py-lineno">1671</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ll</tt> <tt class="py-keyword">and</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L1672"></a><tt class="py-lineno">1672</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">.</tt><tt id="link-547" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-547', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1673"></a><tt class="py-lineno">1673</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
</div><a name="L1674"></a><tt class="py-lineno">1674</tt>  <tt class="py-line"><tt class="py-comment">#         r = [ r ]</tt> </tt>
<a name="L1675"></a><tt class="py-lineno">1675</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#     return N.array( r )</tt> </tt>
<a name="L1676"></a><tt class="py-lineno">1676</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt id="link-548" class="py-name" targets="Function Priithon.useful.nd__sum()=Priithon.useful-module.html#nd__sum"><a title="Priithon.useful.nd__sum" class="py-name" href="#" onclick="return doclink('link-548', 'nd__sum', 'link-548');">nd__sum</a></tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">=</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">+</tt> <tt id="link-549" class="py-name"><a title="Priithon.useful._U_nd_extra_doc_" class="py-name" href="#" onclick="return doclink('link-549', '_U_nd_extra_doc_', 'link-530');">_U_nd_extra_doc_</a></tt> </tt>
<a name="L1677"></a><tt class="py-lineno">1677</tt>  <tt class="py-line"> </tt>
<a name="L1678"></a><tt class="py-lineno">1678</tt>  <tt class="py-line"> </tt>
<a name="L1679"></a><tt class="py-lineno">1679</tt>  <tt class="py-line"> </tt>
<a name="L1680"></a><tt class="py-lineno">1680</tt>  <tt class="py-line"> </tt>
<a name="noiseSigma"></a><div id="noiseSigma-def"><a name="L1681"></a><tt class="py-lineno">1681</tt> <a class="py-toggle" href="#" id="noiseSigma-toggle" onclick="return toggle('noiseSigma');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#noiseSigma">noiseSigma</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">backgroundMean</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="noiseSigma-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="noiseSigma-expanded"><a name="L1682"></a><tt class="py-lineno">1682</tt>  <tt class="py-line">    <tt class="py-docstring">"""ask Erik"""</tt> </tt>
<a name="L1683"></a><tt class="py-lineno">1683</tt>  <tt class="py-line">    <tt class="py-comment"># from numpy import nd_image as nd</tt> </tt>
<a name="L1684"></a><tt class="py-lineno">1684</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">if</tt> <tt class="py-name">backgroundMean</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1685"></a><tt class="py-lineno">1685</tt>  <tt class="py-line">        <tt class="py-name">m</tt> <tt class="py-op">=</tt> <tt id="link-550" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-550', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-551" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-551', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-comment">#20040707 nd.mean(arr)</tt> </tt>
<a name="L1686"></a><tt class="py-lineno">1686</tt>  <tt class="py-line">        <tt class="py-comment">#       s = nd.standard_deviation(arr)</tt> </tt>
<a name="L1687"></a><tt class="py-lineno">1687</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#       nd.standard_deviation(d, d&lt;m+s)</tt> </tt>
<a name="L1688"></a><tt class="py-lineno">1688</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1689"></a><tt class="py-lineno">1689</tt>  <tt class="py-line">        <tt class="py-name">m</tt><tt class="py-op">=</tt><tt class="py-name">backgroundMean</tt> </tt>
<a name="L1690"></a><tt class="py-lineno">1690</tt>  <tt class="py-line">    <tt id="link-552" class="py-name"><a title="Priithon.useful.mm" class="py-name" href="#" onclick="return doclink('link-552', 'mm', 'link-67');">mm</a></tt> <tt class="py-op">=</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt id="link-553" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-553', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt><tt id="link-554" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-554', 'arr', 'link-41');">arr</a></tt><tt class="py-op">,</tt> <tt class="py-name">labels</tt><tt class="py-op">=</tt><tt id="link-555" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-555', 'arr', 'link-41');">arr</a></tt><tt class="py-op">&lt;</tt><tt class="py-name">m</tt><tt class="py-op">,</tt> <tt class="py-name">index</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt> <tt class="py-op">-</tt> <tt class="py-name">m</tt> </tt>
<a name="L1691"></a><tt class="py-lineno">1691</tt>  <tt class="py-line"> </tt>
<a name="L1692"></a><tt class="py-lineno">1692</tt>  <tt class="py-line">    <tt class="py-comment">#ask Erik:</tt> </tt>
<a name="L1693"></a><tt class="py-lineno">1693</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-556" class="py-name"><a title="Priithon.mandel.sqrt
Priithon.plt.interface.sqrt
Priithon.plt.plot_objects.sqrt
Priithon.plt.plot_utility.sqrt
Priithon.plt.sqrt
Priithon.plt.wxplt.sqrt" class="py-name" href="#" onclick="return doclink('link-556', 'sqrt', 'link-175');">sqrt</a></tt><tt class="py-op">(</tt> <tt class="py-op">(</tt><tt id="link-557" class="py-name"><a title="Priithon.useful.mm" class="py-name" href="#" onclick="return doclink('link-557', 'mm', 'link-67');">mm</a></tt><tt class="py-op">**</tt><tt class="py-number">2</tt><tt class="py-op">)</tt> <tt class="py-op">*</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-558" class="py-name"><a title="Priithon.mandel.pi
Priithon.plt.interface.pi
Priithon.plt.pi
Priithon.plt.plot_objects.pi
Priithon.plt.plot_utility.pi
Priithon.plt.wxplt.pi" class="py-name" href="#" onclick="return doclink('link-558', 'pi', 'link-230');">pi</a></tt> <tt class="py-op">*</tt> <tt class="py-number">.5</tt> <tt class="py-op">)</tt> </tt>
</div><a name="L1694"></a><tt class="py-lineno">1694</tt>  <tt class="py-line"> </tt>
<a name="signal2noise"></a><div id="signal2noise-def"><a name="L1695"></a><tt class="py-lineno">1695</tt> <a class="py-toggle" href="#" id="signal2noise-toggle" onclick="return toggle('signal2noise');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#signal2noise">signal2noise</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="signal2noise-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="signal2noise-expanded"><a name="L1696"></a><tt class="py-lineno">1696</tt>  <tt class="py-line">    <tt class="py-comment"># from numarray import nd_image as nd</tt> </tt>
<a name="L1697"></a><tt class="py-lineno">1697</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">ma</tt> <tt class="py-op">=</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt id="link-559" class="py-name"><a title="Priithon.mandel.maximum
Priithon.plt.interface.maximum
Priithon.plt.maximum
Priithon.plt.plot_objects.maximum
Priithon.plt.plot_utility.maximum
Priithon.plt.wxplt.maximum" class="py-name" href="#" onclick="return doclink('link-559', 'maximum', 'link-237');">maximum</a></tt><tt class="py-op">(</tt><tt id="link-560" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-560', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L1698"></a><tt class="py-lineno">1698</tt>  <tt class="py-line"> </tt>
<a name="L1699"></a><tt class="py-lineno">1699</tt>  <tt class="py-line">    <tt class="py-name">m</tt> <tt class="py-op">=</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt id="link-561" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-561', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt><tt id="link-562" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-562', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L1700"></a><tt class="py-lineno">1700</tt>  <tt class="py-line">    <tt class="py-comment">#       s = nd.standard_deviation(arr)</tt> </tt>
<a name="L1701"></a><tt class="py-lineno">1701</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#       nd.standard_deviation(d, d&lt;m+s)</tt> </tt>
<a name="L1702"></a><tt class="py-lineno">1702</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt id="link-563" class="py-name"><a title="Priithon.useful.mm" class="py-name" href="#" onclick="return doclink('link-563', 'mm', 'link-67');">mm</a></tt> <tt class="py-op">=</tt> <tt class="py-name">nd</tt><tt class="py-op">.</tt><tt id="link-564" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-564', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt><tt id="link-565" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-565', 'arr', 'link-41');">arr</a></tt><tt class="py-op">,</tt> <tt class="py-name">labels</tt><tt class="py-op">=</tt><tt id="link-566" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-566', 'arr', 'link-41');">arr</a></tt><tt class="py-op">&lt;</tt><tt class="py-name">m</tt><tt class="py-op">,</tt> <tt class="py-name">index</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt> <tt class="py-op">-</tt> <tt class="py-name">m</tt> </tt>
<a name="L1703"></a><tt class="py-lineno">1703</tt>  <tt class="py-line"> </tt>
<a name="L1704"></a><tt class="py-lineno">1704</tt>  <tt class="py-line">    <tt class="py-name">sigma</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-567" class="py-name"><a title="Priithon.mandel.sqrt
Priithon.plt.interface.sqrt
Priithon.plt.plot_objects.sqrt
Priithon.plt.plot_utility.sqrt
Priithon.plt.sqrt
Priithon.plt.wxplt.sqrt" class="py-name" href="#" onclick="return doclink('link-567', 'sqrt', 'link-175');">sqrt</a></tt><tt class="py-op">(</tt> <tt class="py-op">(</tt><tt id="link-568" class="py-name"><a title="Priithon.useful.mm" class="py-name" href="#" onclick="return doclink('link-568', 'mm', 'link-67');">mm</a></tt><tt class="py-op">**</tt><tt class="py-number">2</tt><tt class="py-op">)</tt> <tt class="py-op">*</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-569" class="py-name"><a title="Priithon.mandel.pi
Priithon.plt.interface.pi
Priithon.plt.pi
Priithon.plt.plot_objects.pi
Priithon.plt.plot_utility.pi
Priithon.plt.wxplt.pi" class="py-name" href="#" onclick="return doclink('link-569', 'pi', 'link-230');">pi</a></tt> <tt class="py-op">*</tt> <tt class="py-number">.5</tt> <tt class="py-op">)</tt> </tt>
<a name="L1705"></a><tt class="py-lineno">1705</tt>  <tt class="py-line">    <tt class="py-comment">#from Priithon import seb as S</tt> </tt>
<a name="L1706"></a><tt class="py-lineno">1706</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#print "debug:", S.median(arr)</tt> </tt>
<a name="L1707"></a><tt class="py-lineno">1707</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#from numarray import image</tt> </tt>
<a name="L1708"></a><tt class="py-lineno">1708</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#global med</tt> </tt>
<a name="L1709"></a><tt class="py-lineno">1709</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#med = arr</tt> </tt>
<a name="L1710"></a><tt class="py-lineno">1710</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#while not type(med) == type(1) or med.ndim &gt; 0:</tt> </tt>
<a name="L1711"></a><tt class="py-lineno">1711</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     med = image.median(med)</tt> </tt>
<a name="L1712"></a><tt class="py-lineno">1712</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#med = image.median(N.ravel(arr))</tt> </tt>
<a name="L1713"></a><tt class="py-lineno">1713</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#print "debug:", med</tt> </tt>
<a name="L1714"></a><tt class="py-lineno">1714</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">print</tt> <tt class="py-string">"debug - mean: %s      max: %s  meanLeft: %d     sigma: %s"</tt> <tt class="py-op">%</tt><tt class="py-op">(</tt> <tt class="py-name">m</tt><tt class="py-op">,</tt> <tt class="py-name">ma</tt><tt class="py-op">,</tt> <tt id="link-570" class="py-name"><a title="Priithon.useful.mm" class="py-name" href="#" onclick="return doclink('link-570', 'mm', 'link-67');">mm</a></tt><tt class="py-op">,</tt> <tt class="py-name">sigma</tt><tt class="py-op">)</tt> </tt>
<a name="L1715"></a><tt class="py-lineno">1715</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">ma</tt><tt class="py-op">-</tt><tt class="py-name">m</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">sigma</tt> </tt>
</div><a name="L1716"></a><tt class="py-lineno">1716</tt>  <tt class="py-line"> </tt>
<a name="L1717"></a><tt class="py-lineno">1717</tt>  <tt class="py-line"> </tt>
<a name="interpolate1d"></a><div id="interpolate1d-def"><a name="L1718"></a><tt class="py-lineno">1718</tt> <a class="py-toggle" href="#" id="interpolate1d-toggle" onclick="return toggle('interpolate1d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#interpolate1d">interpolate1d</a><tt class="py-op">(</tt><tt class="py-param">x0</tt><tt class="py-op">,</tt> <tt class="py-param">y</tt><tt class="py-op">,</tt> <tt class="py-param">x</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="interpolate1d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="interpolate1d-expanded"><a name="L1719"></a><tt class="py-lineno">1719</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1720"></a><tt class="py-lineno">1720</tt>  <tt class="py-line"><tt class="py-docstring">    assume a function f(x) = y</tt> </tt>
<a name="L1721"></a><tt class="py-lineno">1721</tt>  <tt class="py-line"><tt class="py-docstring">    defined by value-pairs in y,x</tt> </tt>
<a name="L1722"></a><tt class="py-lineno">1722</tt>  <tt class="py-line"><tt class="py-docstring">    evaluate this at x=x0</tt> </tt>
<a name="L1723"></a><tt class="py-lineno">1723</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1724"></a><tt class="py-lineno">1724</tt>  <tt class="py-line"><tt class="py-docstring">    uses order 3 spline to do interpolation</tt> </tt>
<a name="L1725"></a><tt class="py-lineno">1725</tt>  <tt class="py-line"><tt class="py-docstring">    [scipy.interpolate.splrep(...k=3...)</tt> </tt>
<a name="L1726"></a><tt class="py-lineno">1726</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1727"></a><tt class="py-lineno">1727</tt>  <tt class="py-line"><tt class="py-docstring">    note: x0 does not need to be one of the given values in x</tt> </tt>
<a name="L1728"></a><tt class="py-lineno">1728</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1729"></a><tt class="py-lineno">1729</tt>  <tt class="py-line"><tt class="py-docstring">    if x is None: use N.arange(len(y))</tt> </tt>
<a name="L1730"></a><tt class="py-lineno">1730</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1731"></a><tt class="py-lineno">1731</tt>  <tt class="py-line"><tt class="py-docstring">    more repeated evaluations </tt> </tt>
<a name="L1732"></a><tt class="py-lineno">1732</tt>  <tt class="py-line"><tt class="py-docstring">    this is slow - because it remakes the spline fit every time</tt> </tt>
<a name="L1733"></a><tt class="py-lineno">1733</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1734"></a><tt class="py-lineno">1734</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">scipy</tt><tt class="py-op">.</tt><tt class="py-name">interpolate</tt> </tt>
<a name="L1735"></a><tt class="py-lineno">1735</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-571" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-571', 'x', 'link-481');">x</a></tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1736"></a><tt class="py-lineno">1736</tt>  <tt class="py-line">        <tt id="link-572" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-572', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">arange</tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">y</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L1737"></a><tt class="py-lineno">1737</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1738"></a><tt class="py-lineno">1738</tt>  <tt class="py-line">        <tt class="py-name">ii</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">argsort</tt><tt class="py-op">(</tt><tt id="link-573" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-573', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt> </tt>
<a name="L1739"></a><tt class="py-lineno">1739</tt>  <tt class="py-line">        <tt id="link-574" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-574', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt id="link-575" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-575', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">ii</tt><tt class="py-op">]</tt> </tt>
<a name="L1740"></a><tt class="py-lineno">1740</tt>  <tt class="py-line">        <tt class="py-name">y</tt> <tt class="py-op">=</tt> <tt class="py-name">y</tt><tt class="py-op">[</tt><tt class="py-name">ii</tt><tt class="py-op">]</tt> </tt>
<a name="L1741"></a><tt class="py-lineno">1741</tt>  <tt class="py-line"> </tt>
<a name="L1742"></a><tt class="py-lineno">1742</tt>  <tt class="py-line">    <tt class="py-name">rep</tt> <tt class="py-op">=</tt> <tt class="py-name">scipy</tt><tt class="py-op">.</tt><tt class="py-name">interpolate</tt><tt class="py-op">.</tt><tt class="py-name">splrep</tt><tt class="py-op">(</tt><tt id="link-576" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-576', 'x', 'link-481');">x</a></tt><tt class="py-op">,</tt> <tt class="py-name">y</tt><tt class="py-op">,</tt>  </tt>
<a name="L1743"></a><tt class="py-lineno">1743</tt>  <tt class="py-line">                                   <tt class="py-name">w</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-name">xb</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-name">xe</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt>  </tt>
<a name="L1744"></a><tt class="py-lineno">1744</tt>  <tt class="py-line">                                   <tt id="link-577" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-577', 'k', 'link-99');">k</a></tt><tt class="py-op">=</tt><tt class="py-number">3</tt><tt class="py-op">,</tt> <tt class="py-name">task</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-name">s</tt><tt class="py-op">=</tt><tt class="py-number">0.001</tt><tt class="py-op">,</tt> <tt class="py-name">t</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt>  </tt>
<a name="L1745"></a><tt class="py-lineno">1745</tt>  <tt class="py-line">                                   <tt class="py-name">full_output</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-name">per</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-name">quiet</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1746"></a><tt class="py-lineno">1746</tt>  <tt class="py-line"> </tt>
<a name="L1747"></a><tt class="py-lineno">1747</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">scipy</tt><tt class="py-op">.</tt><tt class="py-name">interpolate</tt><tt class="py-op">.</tt><tt class="py-name">splev</tt><tt class="py-op">(</tt><tt class="py-name">x0</tt><tt class="py-op">,</tt><tt class="py-name">rep</tt><tt class="py-op">)</tt> </tt>
</div><a name="L1748"></a><tt class="py-lineno">1748</tt>  <tt class="py-line">         </tt>
<a name="L1749"></a><tt class="py-lineno">1749</tt>  <tt class="py-line"> </tt>
<a name="L1750"></a><tt class="py-lineno">1750</tt>  <tt class="py-line"> </tt>
<a name="L1751"></a><tt class="py-lineno">1751</tt>  <tt class="py-line"> </tt>
<a name="L1752"></a><tt class="py-lineno">1752</tt>  <tt class="py-line"> </tt>
<a name="L1753"></a><tt class="py-lineno">1753</tt>  <tt class="py-line"> </tt>
<a name="histogram"></a><div id="histogram-def"><a name="L1754"></a><tt class="py-lineno">1754</tt> <a class="py-toggle" href="#" id="histogram-toggle" onclick="return toggle('histogram');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#histogram">histogram</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">nBins</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">amin</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt><tt class="py-param">amax</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">histArr</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">norm</tt><tt class="py-op">=</tt><tt id="link-578" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-578', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">cumsum</tt><tt class="py-op">=</tt><tt id="link-579" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-579', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">returnTuple</tt><tt class="py-op">=</tt><tt id="link-580" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-580', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">exclude_amax</tt><tt class="py-op">=</tt><tt id="link-581" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-581', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="histogram-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="histogram-expanded"><a name="L1755"></a><tt class="py-lineno">1755</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1756"></a><tt class="py-lineno">1756</tt>  <tt class="py-line"><tt class="py-docstring">    creates/returns  array with nBins int32 entries</tt> </tt>
<a name="L1757"></a><tt class="py-lineno">1757</tt>  <tt class="py-line"><tt class="py-docstring">       fills it with histogram of 'a'</tt> </tt>
<a name="L1758"></a><tt class="py-lineno">1758</tt>  <tt class="py-line"><tt class="py-docstring">    if amin and/or amax is None it calculates the min/max of a and uses that</tt> </tt>
<a name="L1759"></a><tt class="py-lineno">1759</tt>  <tt class="py-line"><tt class="py-docstring">    if nBins is None:</tt> </tt>
<a name="L1760"></a><tt class="py-lineno">1760</tt>  <tt class="py-line"><tt class="py-docstring">        nBins = int(amax-amin+1)</tt> </tt>
<a name="L1761"></a><tt class="py-lineno">1761</tt>  <tt class="py-line"><tt class="py-docstring">        if narr is of float dtype and nBins &lt; 100:</tt> </tt>
<a name="L1762"></a><tt class="py-lineno">1762</tt>  <tt class="py-line"><tt class="py-docstring">            nBins = 100</tt> </tt>
<a name="L1763"></a><tt class="py-lineno">1763</tt>  <tt class="py-line"><tt class="py-docstring">    if histArr is given it is used to fill in the histogram values</tt> </tt>
<a name="L1764"></a><tt class="py-lineno">1764</tt>  <tt class="py-line"><tt class="py-docstring">        then nBins must be None and histArr of dtype N.int32</tt> </tt>
<a name="L1765"></a><tt class="py-lineno">1765</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L1766"></a><tt class="py-lineno">1766</tt>  <tt class="py-line"><tt class="py-docstring">    if norm:</tt> </tt>
<a name="L1767"></a><tt class="py-lineno">1767</tt>  <tt class="py-line"><tt class="py-docstring">       divide bins (=histArr) by sum of bins and convert to float64</tt> </tt>
<a name="L1768"></a><tt class="py-lineno">1768</tt>  <tt class="py-line"><tt class="py-docstring">    if cumsum:</tt> </tt>
<a name="L1769"></a><tt class="py-lineno">1769</tt>  <tt class="py-line"><tt class="py-docstring">       calculate cumulative histogram (apply N.cumsum)</tt> </tt>
<a name="L1770"></a><tt class="py-lineno">1770</tt>  <tt class="py-line"><tt class="py-docstring">       if norm: normalize so that rightmost bin will be 1</tt> </tt>
<a name="L1771"></a><tt class="py-lineno">1771</tt>  <tt class="py-line"><tt class="py-docstring">    if returnTuple:</tt> </tt>
<a name="L1772"></a><tt class="py-lineno">1772</tt>  <tt class="py-line"><tt class="py-docstring">        return (histArr, nBins, amin, amax)</tt> </tt>
<a name="L1773"></a><tt class="py-lineno">1773</tt>  <tt class="py-line"><tt class="py-docstring">    if exclude_amax:</tt> </tt>
<a name="L1774"></a><tt class="py-lineno">1774</tt>  <tt class="py-line"><tt class="py-docstring">        last bin starts at amax</tt> </tt>
<a name="L1775"></a><tt class="py-lineno">1775</tt>  <tt class="py-line"><tt class="py-docstring">    else:  last bin ends at amax, values equal amax are NOT counted</tt> </tt>
<a name="L1776"></a><tt class="py-lineno">1776</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1777"></a><tt class="py-lineno">1777</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L1778"></a><tt class="py-lineno">1778</tt>  <tt class="py-line">     </tt>
<a name="L1779"></a><tt class="py-lineno">1779</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">amin</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">and</tt> <tt class="py-name">amax</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1780"></a><tt class="py-lineno">1780</tt>  <tt class="py-line">        <tt class="py-name">amin</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-582" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-582', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt>   </tt>
<a name="L1781"></a><tt class="py-lineno">1781</tt>  <tt class="py-line">        <tt class="py-name">amax</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-583" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-583', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1782"></a><tt class="py-lineno">1782</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">amin</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1783"></a><tt class="py-lineno">1783</tt>  <tt class="py-line">        <tt class="py-name">amin</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-584" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-584', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1784"></a><tt class="py-lineno">1784</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">amax</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1785"></a><tt class="py-lineno">1785</tt>  <tt class="py-line">        <tt class="py-name">amax</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-585" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-585', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1786"></a><tt class="py-lineno">1786</tt>  <tt class="py-line"> </tt>
<a name="L1787"></a><tt class="py-lineno">1787</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">histArr</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1788"></a><tt class="py-lineno">1788</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">nBins</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1789"></a><tt class="py-lineno">1789</tt>  <tt class="py-line">            <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">(</tt><tt class="py-string">"only one of histArr and nBins can be given"</tt><tt class="py-op">)</tt> </tt>
<a name="L1790"></a><tt class="py-lineno">1790</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">histArr</tt><tt class="py-op">.</tt><tt id="link-586" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-586', 'dtype', 'link-19');">dtype</a></tt> <tt class="py-op">!=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">int32</tt><tt class="py-op">:</tt> </tt>
<a name="L1791"></a><tt class="py-lineno">1791</tt>  <tt class="py-line">            <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">(</tt><tt class="py-string">"histArr must of dtype N.int32"</tt><tt class="py-op">)</tt> </tt>
<a name="L1792"></a><tt class="py-lineno">1792</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">histArr</tt><tt class="py-op">.</tt><tt class="py-name">flags</tt><tt class="py-op">.</tt><tt class="py-name">carray</tt> <tt class="py-keyword">or</tt>  <tt class="py-keyword">not</tt> <tt class="py-name">histArr</tt><tt class="py-op">.</tt><tt id="link-587" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-587', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">isnative</tt><tt class="py-op">:</tt> </tt>
<a name="L1793"></a><tt class="py-lineno">1793</tt>  <tt class="py-line">            <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">(</tt><tt class="py-string">"histArr must be a 'native c(ordered)-array'"</tt><tt class="py-op">)</tt> </tt>
<a name="L1794"></a><tt class="py-lineno">1794</tt>  <tt class="py-line">        <tt class="py-name">nBins</tt> <tt class="py-op">=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">histArr</tt><tt class="py-op">)</tt> </tt>
<a name="L1795"></a><tt class="py-lineno">1795</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1796"></a><tt class="py-lineno">1796</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">nBins</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1797"></a><tt class="py-lineno">1797</tt>  <tt class="py-line">            <tt class="py-name">nBins</tt> <tt class="py-op">=</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">amax</tt><tt class="py-op">-</tt><tt class="py-name">amin</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1798"></a><tt class="py-lineno">1798</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">issubdtype</tt><tt class="py-op">(</tt><tt class="py-name">float</tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-588" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-588', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">)</tt> <tt class="py-keyword">and</tt> <tt class="py-name">nBins</tt> <tt class="py-op">&lt;</tt> <tt class="py-number">100</tt><tt class="py-op">:</tt> </tt>
<a name="L1799"></a><tt class="py-lineno">1799</tt>  <tt class="py-line">                <tt class="py-name">nBins</tt> <tt class="py-op">=</tt> <tt class="py-number">100</tt> </tt>
<a name="L1800"></a><tt class="py-lineno">1800</tt>  <tt class="py-line"> </tt>
<a name="L1801"></a><tt class="py-lineno">1801</tt>  <tt class="py-line">        <tt class="py-name">histArr</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt> <tt id="link-589" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-589', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">nBins</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-590" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-590', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">int32</tt> <tt class="py-op">)</tt> </tt>
<a name="L1802"></a><tt class="py-lineno">1802</tt>  <tt class="py-line"> </tt>
<a name="L1803"></a><tt class="py-lineno">1803</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt id="link-591" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-591', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L1804"></a><tt class="py-lineno">1804</tt>  <tt class="py-line"> </tt>
<a name="L1805"></a><tt class="py-lineno">1805</tt>  <tt class="py-line">    <tt class="py-comment"># NOTE: S.histogram *ignores* all values outside range (it does not count amax !!)</tt> </tt>
<a name="L1806"></a><tt class="py-lineno">1806</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#       it only count amin&lt;= val &lt; amax</tt> </tt>
<a name="L1807"></a><tt class="py-lineno">1807</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L1808"></a><tt class="py-lineno">1808</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">exclude_amax</tt><tt class="py-op">:</tt> </tt>
<a name="L1809"></a><tt class="py-lineno">1809</tt>  <tt class="py-line">        <tt class="py-name">amaxTweaked</tt> <tt class="py-op">=</tt> <tt class="py-name">amax</tt> </tt>
<a name="L1810"></a><tt class="py-lineno">1810</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1811"></a><tt class="py-lineno">1811</tt>  <tt class="py-line">        <tt class="py-name">amaxTweaked</tt> <tt class="py-op">=</tt> <tt class="py-name">amin</tt><tt class="py-op">+</tt><tt class="py-name">nBins</tt><tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-name">amax</tt><tt class="py-op">-</tt><tt class="py-name">amin</tt><tt class="py-op">)</tt><tt class="py-op">/</tt><tt class="py-op">(</tt><tt class="py-name">nBins</tt><tt class="py-op">-</tt><tt class="py-number">1.</tt><tt class="py-op">)</tt> </tt>
<a name="L1812"></a><tt class="py-lineno">1812</tt>  <tt class="py-line">    <tt class="py-comment"># CHECK numpy - why type(a.min())=numpy.float32 not SWIG compatible to float!</tt> </tt>
<a name="L1813"></a><tt class="py-lineno">1813</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-592" class="py-name" targets="Module Priithon.histogram=Priithon.histogram-module.html,Function Priithon.useful.histogram()=Priithon.useful-module.html#histogram"><a title="Priithon.histogram
Priithon.useful.histogram" class="py-name" href="#" onclick="return doclink('link-592', 'histogram', 'link-592');">histogram</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">amin</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">amaxTweaked</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">histArr</tt><tt class="py-op">)</tt> </tt>
<a name="L1814"></a><tt class="py-lineno">1814</tt>  <tt class="py-line"> </tt>
<a name="L1815"></a><tt class="py-lineno">1815</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-593" class="py-name" targets="Function Priithon.useful.norm()=Priithon.useful-module.html#norm"><a title="Priithon.useful.norm" class="py-name" href="#" onclick="return doclink('link-593', 'norm', 'link-593');">norm</a></tt><tt class="py-op">:</tt> </tt>
<a name="L1816"></a><tt class="py-lineno">1816</tt>  <tt class="py-line">        <tt class="py-name">histArrNormed</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt> <tt id="link-594" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-594', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">nBins</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-595" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-595', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float64</tt> <tt class="py-op">)</tt> </tt>
<a name="L1817"></a><tt class="py-lineno">1817</tt>  <tt class="py-line">        <tt class="py-name">histArrNormed</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">histArr</tt> </tt>
<a name="L1818"></a><tt class="py-lineno">1818</tt>  <tt class="py-line">        <tt class="py-comment"># if cumsum:</tt> </tt>
<a name="L1819"></a><tt class="py-lineno">1819</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#     binWidth = (float(amaxTweaked)-float(amin))/nBins</tt> </tt>
<a name="L1820"></a><tt class="py-lineno">1820</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#    normFac = binWidth / histArr.sum()</tt> </tt>
<a name="L1821"></a><tt class="py-lineno">1821</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#else:</tt> </tt>
<a name="L1822"></a><tt class="py-lineno">1822</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#    normFac = 1./ histArr.sum()</tt> </tt>
<a name="L1823"></a><tt class="py-lineno">1823</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#histArrNormed *= normFac</tt> </tt>
<a name="L1824"></a><tt class="py-lineno">1824</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-name">histArrNormed</tt> <tt class="py-op">/=</tt> <tt class="py-name">histArrNormed</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1825"></a><tt class="py-lineno">1825</tt>  <tt class="py-line">        <tt class="py-name">histArr</tt> <tt class="py-op">=</tt> <tt class="py-name">histArrNormed</tt> </tt>
<a name="L1826"></a><tt class="py-lineno">1826</tt>  <tt class="py-line"> </tt>
<a name="L1827"></a><tt class="py-lineno">1827</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">cumsum</tt><tt class="py-op">:</tt> </tt>
<a name="L1828"></a><tt class="py-lineno">1828</tt>  <tt class="py-line">        <tt class="py-name">histArr</tt><tt class="py-op">.</tt><tt class="py-name">cumsum</tt><tt class="py-op">(</tt><tt class="py-name">out</tt><tt class="py-op">=</tt><tt class="py-name">histArr</tt><tt class="py-op">)</tt> </tt>
<a name="L1829"></a><tt class="py-lineno">1829</tt>  <tt class="py-line"> </tt>
<a name="L1830"></a><tt class="py-lineno">1830</tt>  <tt class="py-line"> </tt>
<a name="L1831"></a><tt class="py-lineno">1831</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">returnTuple</tt><tt class="py-op">:</tt> </tt>
<a name="L1832"></a><tt class="py-lineno">1832</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">histArr</tt><tt class="py-op">,</tt> <tt class="py-name">nBins</tt><tt class="py-op">,</tt> <tt class="py-name">amin</tt><tt class="py-op">,</tt> <tt class="py-name">amax</tt><tt class="py-op">)</tt> </tt>
<a name="L1833"></a><tt class="py-lineno">1833</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1834"></a><tt class="py-lineno">1834</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">histArr</tt> </tt>
</div><a name="L1835"></a><tt class="py-lineno">1835</tt>  <tt class="py-line"> </tt>
<a name="histogramXY"></a><div id="histogramXY-def"><a name="L1836"></a><tt class="py-lineno">1836</tt> <a class="py-toggle" href="#" id="histogramXY-toggle" onclick="return toggle('histogramXY');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#histogramXY">histogramXY</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">nBins</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">amin</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt><tt class="py-param">amax</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">histArr</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">norm</tt><tt class="py-op">=</tt><tt id="link-596" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-596', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">cumsum</tt><tt class="py-op">=</tt><tt id="link-597" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-597', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">exclude_amax</tt><tt class="py-op">=</tt><tt id="link-598" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-598', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="histogramXY-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="histogramXY-expanded"><a name="L1837"></a><tt class="py-lineno">1837</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1838"></a><tt class="py-lineno">1838</tt>  <tt class="py-line"><tt class="py-docstring">    returns flipped version of histogramYX</tt> </tt>
<a name="L1839"></a><tt class="py-lineno">1839</tt>  <tt class="py-line"><tt class="py-docstring">    use this e.g. in</tt> </tt>
<a name="L1840"></a><tt class="py-lineno">1840</tt>  <tt class="py-line"><tt class="py-docstring">     Y.plotxy( U.histogramXY( a ) )</tt> </tt>
<a name="L1841"></a><tt class="py-lineno">1841</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt>  </tt>
<a name="L1842"></a><tt class="py-lineno">1842</tt>  <tt class="py-line">    <tt class="py-name">b</tt><tt class="py-op">,</tt><tt id="link-599" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-599', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt id="link-600" class="py-name" targets="Function Priithon.useful.histogramYX()=Priithon.useful-module.html#histogramYX"><a title="Priithon.useful.histogramYX" class="py-name" href="#" onclick="return doclink('link-600', 'histogramYX', 'link-600');">histogramYX</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">nBins</tt><tt class="py-op">,</tt> <tt class="py-name">amin</tt><tt class="py-op">,</tt><tt class="py-name">amax</tt><tt class="py-op">,</tt> <tt class="py-name">histArr</tt><tt class="py-op">,</tt> <tt id="link-601" class="py-name"><a title="Priithon.useful.norm" class="py-name" href="#" onclick="return doclink('link-601', 'norm', 'link-593');">norm</a></tt><tt class="py-op">,</tt> <tt class="py-name">cumsum</tt><tt class="py-op">,</tt> <tt class="py-name">exclude_amax</tt><tt class="py-op">)</tt> </tt>
<a name="L1843"></a><tt class="py-lineno">1843</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-602" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-602', 'x', 'link-481');">x</a></tt><tt class="py-op">,</tt><tt class="py-name">b</tt> </tt>
</div><a name="L1844"></a><tt class="py-lineno">1844</tt>  <tt class="py-line"><tt id="link-603" class="py-name" targets="Function Priithon.useful.histogramXY()=Priithon.useful-module.html#histogramXY"><a title="Priithon.useful.histogramXY" class="py-name" href="#" onclick="return doclink('link-603', 'histogramXY', 'link-603');">histogramXY</a></tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">+=</tt> <tt class="py-string">'\n'</tt> <tt class="py-op">+</tt> <tt id="link-604" class="py-name"><a title="Priithon.histogram
Priithon.useful.histogram" class="py-name" href="#" onclick="return doclink('link-604', 'histogram', 'link-592');">histogram</a></tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> </tt>
<a name="histogramYX"></a><div id="histogramYX-def"><a name="L1845"></a><tt class="py-lineno">1845</tt> <a class="py-toggle" href="#" id="histogramYX-toggle" onclick="return toggle('histogramYX');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#histogramYX">histogramYX</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">nBins</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">amin</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt><tt class="py-param">amax</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">histArr</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">norm</tt><tt class="py-op">=</tt><tt id="link-605" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-605', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">cumsum</tt><tt class="py-op">=</tt><tt id="link-606" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-606', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">exclude_amax</tt><tt class="py-op">=</tt><tt id="link-607" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-607', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="histogramYX-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="histogramYX-expanded"><a name="L1846"></a><tt class="py-lineno">1846</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1847"></a><tt class="py-lineno">1847</tt>  <tt class="py-line"><tt class="py-docstring">    returns same as U.histogram</tt> </tt>
<a name="L1848"></a><tt class="py-lineno">1848</tt>  <tt class="py-line"><tt class="py-docstring">    but also a "range array" amin,...amax with nBins entries</tt> </tt>
<a name="L1849"></a><tt class="py-lineno">1849</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1850"></a><tt class="py-lineno">1850</tt>  <tt class="py-line"> </tt>
<a name="L1851"></a><tt class="py-lineno">1851</tt>  <tt class="py-line">    <tt class="py-name">b</tt><tt class="py-op">,</tt><tt class="py-name">nBins</tt><tt class="py-op">,</tt><tt class="py-name">amin</tt><tt class="py-op">,</tt><tt class="py-name">amax</tt> <tt class="py-op">=</tt> <tt id="link-608" class="py-name"><a title="Priithon.histogram
Priithon.useful.histogram" class="py-name" href="#" onclick="return doclink('link-608', 'histogram', 'link-592');">histogram</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-name">nBins</tt><tt class="py-op">,</tt><tt class="py-name">amin</tt><tt class="py-op">,</tt><tt class="py-name">amax</tt><tt class="py-op">,</tt> <tt class="py-name">histArr</tt><tt class="py-op">,</tt> <tt id="link-609" class="py-name"><a title="Priithon.useful.norm" class="py-name" href="#" onclick="return doclink('link-609', 'norm', 'link-593');">norm</a></tt><tt class="py-op">=</tt><tt id="link-610" class="py-name"><a title="Priithon.useful.norm" class="py-name" href="#" onclick="return doclink('link-610', 'norm', 'link-593');">norm</a></tt><tt class="py-op">,</tt> <tt class="py-name">cumsum</tt><tt class="py-op">=</tt><tt class="py-name">cumsum</tt><tt class="py-op">,</tt> <tt class="py-name">returnTuple</tt><tt class="py-op">=</tt><tt id="link-611" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-611', 'True', 'link-38');">True</a></tt><tt class="py-op">,</tt> <tt class="py-name">exclude_amax</tt><tt class="py-op">=</tt><tt class="py-name">exclude_amax</tt><tt class="py-op">)</tt> </tt>
<a name="L1852"></a><tt class="py-lineno">1852</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-612" class="py-name"><a title="Priithon.useful.norm" class="py-name" href="#" onclick="return doclink('link-612', 'norm', 'link-593');">norm</a></tt><tt class="py-op">:</tt> </tt>
<a name="L1853"></a><tt class="py-lineno">1853</tt>  <tt class="py-line">        <tt id="link-613" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-613', 'x', 'link-481');">x</a></tt><tt class="py-op">,</tt><tt class="py-name">step</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">linspace</tt><tt class="py-op">(</tt><tt class="py-name">amin</tt><tt class="py-op">,</tt><tt class="py-name">amax</tt><tt class="py-op">,</tt> <tt class="py-name">nBins</tt><tt class="py-op">,</tt> <tt class="py-name">endpoint</tt><tt class="py-op">=</tt><tt class="py-keyword">not</tt> <tt class="py-name">exclude_amax</tt><tt class="py-op">,</tt> <tt class="py-name">retstep</tt><tt class="py-op">=</tt><tt id="link-614" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-614', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt> </tt>
<a name="L1854"></a><tt class="py-lineno">1854</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">cumsum</tt><tt class="py-op">:</tt> </tt>
<a name="L1855"></a><tt class="py-lineno">1855</tt>  <tt class="py-line">            <tt class="py-name">b</tt> <tt class="py-op">/=</tt> <tt class="py-name">step</tt> </tt>
<a name="L1856"></a><tt class="py-lineno">1856</tt>  <tt class="py-line"> </tt>
<a name="L1857"></a><tt class="py-lineno">1857</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L1858"></a><tt class="py-lineno">1858</tt>  <tt class="py-line">        <tt id="link-615" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-615', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">linspace</tt><tt class="py-op">(</tt><tt class="py-name">amin</tt><tt class="py-op">,</tt><tt class="py-name">amax</tt><tt class="py-op">,</tt> <tt class="py-name">nBins</tt><tt class="py-op">,</tt> <tt class="py-name">endpoint</tt><tt class="py-op">=</tt><tt class="py-keyword">not</tt> <tt class="py-name">exclude_amax</tt><tt class="py-op">)</tt> </tt>
<a name="L1859"></a><tt class="py-lineno">1859</tt>  <tt class="py-line"> </tt>
<a name="L1860"></a><tt class="py-lineno">1860</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt><tt class="py-op">,</tt> <tt id="link-616" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-616', 'x', 'link-481');">x</a></tt> </tt>
</div><a name="L1861"></a><tt class="py-lineno">1861</tt>  <tt class="py-line"><tt id="link-617" class="py-name"><a title="Priithon.useful.histogramYX" class="py-name" href="#" onclick="return doclink('link-617', 'histogramYX', 'link-600');">histogramYX</a></tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">+=</tt> <tt class="py-string">'\n'</tt> <tt class="py-op">+</tt> <tt id="link-618" class="py-name"><a title="Priithon.histogram
Priithon.useful.histogram" class="py-name" href="#" onclick="return doclink('link-618', 'histogram', 'link-592');">histogram</a></tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> </tt>
<a name="L1862"></a><tt class="py-lineno">1862</tt>  <tt class="py-line"> </tt>
<a name="generalhistogram"></a><div id="generalhistogram-def"><a name="L1863"></a><tt class="py-lineno">1863</tt> <a class="py-toggle" href="#" id="generalhistogram-toggle" onclick="return toggle('generalhistogram');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#generalhistogram">generalhistogram</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">weightImg</tt><tt class="py-op">,</tt> <tt class="py-param">nBins</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">amin</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt><tt class="py-param">amax</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="generalhistogram-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="generalhistogram-expanded"><a name="L1864"></a><tt class="py-lineno">1864</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1865"></a><tt class="py-lineno">1865</tt>  <tt class="py-line"><tt class="py-docstring">    creates/returns ("histogram") array with nBins entries of same dtype as weightImg</tt> </tt>
<a name="L1866"></a><tt class="py-lineno">1866</tt>  <tt class="py-line"><tt class="py-docstring">    while for a standard histogram one adds up 1s in bins for</tt> </tt>
<a name="L1867"></a><tt class="py-lineno">1867</tt>  <tt class="py-line"><tt class="py-docstring">          each time you encouter a certain value in a</tt> </tt>
<a name="L1868"></a><tt class="py-lineno">1868</tt>  <tt class="py-line"><tt class="py-docstring">    generalhistogram  adds the pixel value found in weightImg </tt> </tt>
<a name="L1869"></a><tt class="py-lineno">1869</tt>  <tt class="py-line"><tt class="py-docstring">          each time it encouters a certain value in a (for that pixel)</tt> </tt>
<a name="L1870"></a><tt class="py-lineno">1870</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L1871"></a><tt class="py-lineno">1871</tt>  <tt class="py-line"><tt class="py-docstring">    if amin and/or amax is None it calculates the min/max of a and uses that</tt> </tt>
<a name="L1872"></a><tt class="py-lineno">1872</tt>  <tt class="py-line"><tt class="py-docstring">    if nBins is None:</tt> </tt>
<a name="L1873"></a><tt class="py-lineno">1873</tt>  <tt class="py-line"><tt class="py-docstring">        nBins = int(amax-amin+1)</tt> </tt>
<a name="L1874"></a><tt class="py-lineno">1874</tt>  <tt class="py-line"><tt class="py-docstring">        if a is of float dtype   and nBins &lt; 100:</tt> </tt>
<a name="L1875"></a><tt class="py-lineno">1875</tt>  <tt class="py-line"><tt class="py-docstring">             nBins = 100</tt> </tt>
<a name="L1876"></a><tt class="py-lineno">1876</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1877"></a><tt class="py-lineno">1877</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">amin</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">and</tt> <tt class="py-name">amax</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1878"></a><tt class="py-lineno">1878</tt>  <tt class="py-line">        <tt class="py-name">amin</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-619" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-619', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1879"></a><tt class="py-lineno">1879</tt>  <tt class="py-line">        <tt class="py-name">amax</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-620" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-620', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1880"></a><tt class="py-lineno">1880</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">amin</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1881"></a><tt class="py-lineno">1881</tt>  <tt class="py-line">        <tt class="py-name">amin</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-621" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-621', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1882"></a><tt class="py-lineno">1882</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">amax</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1883"></a><tt class="py-lineno">1883</tt>  <tt class="py-line">        <tt class="py-name">amax</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-622" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-622', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L1884"></a><tt class="py-lineno">1884</tt>  <tt class="py-line"> </tt>
<a name="L1885"></a><tt class="py-lineno">1885</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">nBins</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1886"></a><tt class="py-lineno">1886</tt>  <tt class="py-line">        <tt class="py-name">nBins</tt> <tt class="py-op">=</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">amax</tt><tt class="py-op">-</tt><tt class="py-name">amin</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1887"></a><tt class="py-lineno">1887</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">issubdtype</tt><tt class="py-op">(</tt><tt class="py-name">float</tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-623" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-623', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">)</tt> <tt class="py-keyword">and</tt> <tt class="py-name">nBins</tt> <tt class="py-op">&lt;</tt> <tt class="py-number">100</tt><tt class="py-op">:</tt> </tt>
<a name="L1888"></a><tt class="py-lineno">1888</tt>  <tt class="py-line">            <tt class="py-name">nBins</tt> <tt class="py-op">=</tt> <tt class="py-number">100</tt> </tt>
<a name="L1889"></a><tt class="py-lineno">1889</tt>  <tt class="py-line">    <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt> <tt id="link-624" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-624', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">nBins</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-625" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-625', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">weightImg</tt><tt class="py-op">.</tt><tt id="link-626" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-626', 'dtype', 'link-19');">dtype</a></tt> <tt class="py-op">)</tt> </tt>
<a name="L1890"></a><tt class="py-lineno">1890</tt>  <tt class="py-line"> </tt>
<a name="L1891"></a><tt class="py-lineno">1891</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt id="link-627" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-627', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L1892"></a><tt class="py-lineno">1892</tt>  <tt class="py-line">    <tt class="py-name">weightImg</tt> <tt class="py-op">=</tt> <tt id="link-628" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-628', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt class="py-name">weightImg</tt><tt class="py-op">)</tt> </tt>
<a name="L1893"></a><tt class="py-lineno">1893</tt>  <tt class="py-line"> </tt>
<a name="L1894"></a><tt class="py-lineno">1894</tt>  <tt class="py-line">    <tt class="py-comment"># NOTE: S.histogram *ignores* all values outside range (it does not count amax !!)</tt> </tt>
<a name="L1895"></a><tt class="py-lineno">1895</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#       it only count amin&lt;= val &lt; amax</tt> </tt>
<a name="L1896"></a><tt class="py-lineno">1896</tt>  <tt class="py-line"><tt class="py-comment"></tt>     </tt>
<a name="L1897"></a><tt class="py-lineno">1897</tt>  <tt class="py-line">    <tt class="py-name">amaxTweaked</tt> <tt class="py-op">=</tt> <tt class="py-name">amin</tt><tt class="py-op">+</tt><tt class="py-name">nBins</tt><tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-name">amax</tt><tt class="py-op">-</tt><tt class="py-name">amin</tt><tt class="py-op">)</tt><tt class="py-op">/</tt><tt class="py-op">(</tt><tt class="py-name">nBins</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L1898"></a><tt class="py-lineno">1898</tt>  <tt class="py-line">    <tt class="py-comment"># CHECK numpy - why type(a.min())=numpy.float32 not SWIG compatible to float!</tt> </tt>
<a name="L1899"></a><tt class="py-lineno">1899</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">S</tt><tt class="py-op">.</tt><tt class="py-name">generalhist</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">weightImg</tt><tt class="py-op">,</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">amin</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">amaxTweaked</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">b</tt><tt class="py-op">)</tt> </tt>
<a name="L1900"></a><tt class="py-lineno">1900</tt>  <tt class="py-line"> </tt>
<a name="L1901"></a><tt class="py-lineno">1901</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">b</tt> </tt>
</div><a name="L1902"></a><tt class="py-lineno">1902</tt>  <tt class="py-line">     </tt>
<a name="L1903"></a><tt class="py-lineno">1903</tt>  <tt class="py-line"> </tt>
<a name="L1904"></a><tt class="py-lineno">1904</tt>  <tt class="py-line"> </tt>
<a name="radialHistogram"></a><div id="radialHistogram-def"><a name="L1905"></a><tt class="py-lineno">1905</tt> <a class="py-toggle" href="#" id="radialHistogram-toggle" onclick="return toggle('radialHistogram');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#radialHistogram">radialHistogram</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">orig</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-param">wrap</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-param">nBins</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">amax</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="radialHistogram-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="radialHistogram-expanded"><a name="L1906"></a><tt class="py-lineno">1906</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1907"></a><tt class="py-lineno">1907</tt>  <tt class="py-line"><tt class="py-docstring">    returns 1D histogram of values sorted by euclidian distance</tt> </tt>
<a name="L1908"></a><tt class="py-lineno">1908</tt>  <tt class="py-line"><tt class="py-docstring">    from `orig`</tt> </tt>
<a name="L1909"></a><tt class="py-lineno">1909</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1910"></a><tt class="py-lineno">1910</tt>  <tt class="py-line">    <tt class="py-keyword">global</tt> <tt class="py-name">distance_array</tt><tt class="py-op">,</tt> <tt class="py-name">frequency</tt><tt class="py-op">,</tt> <tt id="link-629" class="py-name"><a title="Priithon.histogram.hist" class="py-name" href="#" onclick="return doclink('link-629', 'hist', 'link-430');">hist</a></tt> <tt class="py-comment"># for debugging</tt> </tt>
<a name="L1911"></a><tt class="py-lineno">1911</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-630" class="py-name"><a title="Priithon.fftfuncs" class="py-name" href="#" onclick="return doclink('link-630', 'fftfuncs', 'link-452');">fftfuncs</a></tt> <tt class="py-keyword">as</tt> <tt class="py-name">F</tt> </tt>
<a name="L1912"></a><tt class="py-lineno">1912</tt>  <tt class="py-line"> </tt>
<a name="L1913"></a><tt class="py-lineno">1913</tt>  <tt class="py-line">    <tt class="py-name">distance_array</tt> <tt class="py-op">=</tt> <tt class="py-name">F</tt><tt class="py-op">.</tt><tt id="link-631" class="py-name" targets="Function Priithon.fftfuncs.radialArr()=Priithon.fftfuncs-module.html#radialArr"><a title="Priithon.fftfuncs.radialArr" class="py-name" href="#" onclick="return doclink('link-631', 'radialArr', 'link-631');">radialArr</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-632" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-632', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt> <tt class="py-keyword">lambda</tt> <tt class="py-name">r</tt><tt class="py-op">:</tt><tt class="py-name">r</tt><tt class="py-op">,</tt> <tt class="py-name">orig</tt><tt class="py-op">=</tt><tt class="py-name">orig</tt><tt class="py-op">,</tt> <tt id="link-633" class="py-name" targets="Function Priithon.py.PyWrap.wrap()=Priithon.py.PyWrap-module.html#wrap,Method Priithon.py.shell.Shell.wrap()=Priithon.py.shell.Shell-class.html#wrap"><a title="Priithon.py.PyWrap.wrap
Priithon.py.shell.Shell.wrap" class="py-name" href="#" onclick="return doclink('link-633', 'wrap', 'link-633');">wrap</a></tt><tt class="py-op">=</tt><tt id="link-634" class="py-name"><a title="Priithon.py.PyWrap.wrap
Priithon.py.shell.Shell.wrap" class="py-name" href="#" onclick="return doclink('link-634', 'wrap', 'link-633');">wrap</a></tt><tt class="py-op">)</tt> </tt>
<a name="L1914"></a><tt class="py-lineno">1914</tt>  <tt class="py-line">     </tt>
<a name="L1915"></a><tt class="py-lineno">1915</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">nBins</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1916"></a><tt class="py-lineno">1916</tt>  <tt class="py-line">        <tt class="py-name">diagLength</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-635" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-635', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt> <tt id="link-636" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-636', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">float</tt><tt class="py-op">)</tt><tt class="py-op">**</tt><tt class="py-number">2</tt><tt class="py-op">)</tt><tt class="py-op">**</tt><tt class="py-number">.5</tt> </tt>
<a name="L1917"></a><tt class="py-lineno">1917</tt>  <tt class="py-line">        <tt class="py-name">nBins</tt> <tt class="py-op">=</tt> <tt class="py-name">diagLength</tt> </tt>
<a name="L1918"></a><tt class="py-lineno">1918</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">amax</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L1919"></a><tt class="py-lineno">1919</tt>  <tt class="py-line">        <tt class="py-name">diagLength</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-637" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-637', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt> <tt id="link-638" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-638', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">float</tt><tt class="py-op">)</tt><tt class="py-op">**</tt><tt class="py-number">2</tt><tt class="py-op">)</tt><tt class="py-op">**</tt><tt class="py-number">.5</tt> </tt>
<a name="L1920"></a><tt class="py-lineno">1920</tt>  <tt class="py-line">        <tt class="py-name">amax</tt> <tt class="py-op">=</tt> <tt class="py-name">diagLength</tt> </tt>
<a name="L1921"></a><tt class="py-lineno">1921</tt>  <tt class="py-line">        <tt class="py-comment"># nBins = N.array(array.shape).max()</tt> </tt>
<a name="L1922"></a><tt class="py-lineno">1922</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#20090107  histogram = N.empty(shape=nbins, dtype=array.dtype)</tt> </tt>
<a name="L1923"></a><tt class="py-lineno">1923</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">## uses Sebastian Haase's general histogram functions</tt> </tt>
<a name="L1924"></a><tt class="py-lineno">1924</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">frequency</tt> <tt class="py-op">=</tt> <tt id="link-639" class="py-name"><a title="Priithon.histogram
Priithon.useful.histogram" class="py-name" href="#" onclick="return doclink('link-639', 'histogram', 'link-592');">histogram</a></tt><tt class="py-op">(</tt><tt class="py-name">distance_array</tt><tt class="py-op">,</tt> <tt class="py-name">nBins</tt><tt class="py-op">=</tt><tt class="py-name">nBins</tt><tt class="py-op">,</tt> <tt class="py-name">amin</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-name">amax</tt><tt class="py-op">=</tt><tt class="py-name">nBins</tt><tt class="py-op">)</tt> </tt>
<a name="L1925"></a><tt class="py-lineno">1925</tt>  <tt class="py-line"> </tt>
<a name="L1926"></a><tt class="py-lineno">1926</tt>  <tt class="py-line">    <tt class="py-comment">## to prevent division by zero</tt> </tt>
<a name="L1927"></a><tt class="py-lineno">1927</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">frequency</tt><tt class="py-op">[</tt><tt class="py-name">frequency</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">=</tt><tt class="py-number">1</tt> <tt class="py-comment"># `hist` should be 0 here, too</tt> </tt>
<a name="L1928"></a><tt class="py-lineno">1928</tt>  <tt class="py-line">         </tt>
<a name="L1929"></a><tt class="py-lineno">1929</tt>  <tt class="py-line"><tt class="py-comment">#   if array.dtype in (N.complex64, N.complex128):</tt> </tt>
<a name="L1930"></a><tt class="py-lineno">1930</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#</tt> </tt>
<a name="L1931"></a><tt class="py-lineno">1931</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#       imag_histogram = N.empty(shape=nbins, dtype=N.float32)</tt> </tt>
<a name="L1932"></a><tt class="py-lineno">1932</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#       ## uses Sebastian Haase's general histogram functions</tt> </tt>
<a name="L1933"></a><tt class="py-lineno">1933</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#       ## doesn't work for complex numbers yet or Float64!</tt> </tt>
<a name="L1934"></a><tt class="py-lineno">1934</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#       S.generalhist(distance_array, array.real.astype(N.float32), 0, nbins,</tt> </tt>
<a name="L1935"></a><tt class="py-lineno">1935</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#               histogram)</tt> </tt>
<a name="L1936"></a><tt class="py-lineno">1936</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#       S.generalhist(distance_array, array.imag.astype(N.float32), 0, nbins, </tt> </tt>
<a name="L1937"></a><tt class="py-lineno">1937</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#               imag_histogram)</tt> </tt>
<a name="L1938"></a><tt class="py-lineno">1938</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#</tt> </tt>
<a name="L1939"></a><tt class="py-lineno">1939</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#       return ((histogram + 1j*imag_histogram) / frequency)</tt> </tt>
<a name="L1940"></a><tt class="py-lineno">1940</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#   else:</tt> </tt>
<a name="L1941"></a><tt class="py-lineno">1941</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#</tt> </tt>
<a name="L1942"></a><tt class="py-lineno">1942</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#       ## uses Sebastian Haase's general histogram functions</tt> </tt>
<a name="L1943"></a><tt class="py-lineno">1943</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#       S.generalhist(distance_array, array.astype(N.float32), 0, nbins,</tt> </tt>
<a name="L1944"></a><tt class="py-lineno">1944</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#               histogram)</tt> </tt>
<a name="L1945"></a><tt class="py-lineno">1945</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#</tt> </tt>
<a name="L1946"></a><tt class="py-lineno">1946</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#       return (histogram / frequency)</tt> </tt>
<a name="L1947"></a><tt class="py-lineno">1947</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt id="link-640" class="py-name"><a title="Priithon.histogram.hist" class="py-name" href="#" onclick="return doclink('link-640', 'hist', 'link-430');">hist</a></tt> <tt class="py-op">=</tt> <tt id="link-641" class="py-name" targets="Function Priithon.useful.generalhistogram()=Priithon.useful-module.html#generalhistogram"><a title="Priithon.useful.generalhistogram" class="py-name" href="#" onclick="return doclink('link-641', 'generalhistogram', 'link-641');">generalhistogram</a></tt><tt class="py-op">(</tt><tt class="py-name">distance_array</tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">nBins</tt><tt class="py-op">=</tt><tt class="py-name">nBins</tt><tt class="py-op">,</tt> <tt class="py-name">amin</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> </tt>
<a name="L1948"></a><tt class="py-lineno">1948</tt>  <tt class="py-line">            <tt class="py-name">amax</tt><tt class="py-op">=</tt><tt class="py-name">amax</tt><tt class="py-op">)</tt> </tt>
<a name="L1949"></a><tt class="py-lineno">1949</tt>  <tt class="py-line"> </tt>
<a name="L1950"></a><tt class="py-lineno">1950</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt id="link-642" class="py-name"><a title="Priithon.histogram.hist" class="py-name" href="#" onclick="return doclink('link-642', 'hist', 'link-430');">hist</a></tt> <tt class="py-op">/</tt> <tt class="py-name">frequency</tt><tt class="py-op">)</tt> </tt>
</div><a name="L1951"></a><tt class="py-lineno">1951</tt>  <tt class="py-line"> </tt>
<a name="L1952"></a><tt class="py-lineno">1952</tt>  <tt class="py-line"> </tt>
<a name="L1953"></a><tt class="py-lineno">1953</tt>  <tt class="py-line"> </tt>
<a name="L1954"></a><tt class="py-lineno">1954</tt>  <tt class="py-line"> </tt>
<a name="L1955"></a><tt class="py-lineno">1955</tt>  <tt class="py-line"> </tt>
<a name="L1956"></a><tt class="py-lineno">1956</tt>  <tt class="py-line"> </tt>
<a name="topPercentile"></a><div id="topPercentile-def"><a name="L1957"></a><tt class="py-lineno">1957</tt> <a class="py-toggle" href="#" id="topPercentile-toggle" onclick="return toggle('topPercentile');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#topPercentile">topPercentile</a><tt class="py-op">(</tt><tt class="py-param">img</tt><tt class="py-op">,</tt> <tt class="py-param">percentile</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="topPercentile-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="topPercentile-expanded"><a name="L1958"></a><tt class="py-lineno">1958</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L1959"></a><tt class="py-lineno">1959</tt>  <tt class="py-line"><tt class="py-docstring">    find intensity for highest percentile</tt> </tt>
<a name="L1960"></a><tt class="py-lineno">1960</tt>  <tt class="py-line"><tt class="py-docstring">    e.g. U.topPercentile(N.arange(10), 10) =&gt; 8</tt> </tt>
<a name="L1961"></a><tt class="py-lineno">1961</tt>  <tt class="py-line"><tt class="py-docstring">       (10% of the array is larger then 8 -- roughly)</tt> </tt>
<a name="L1962"></a><tt class="py-lineno">1962</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L1963"></a><tt class="py-lineno">1963</tt>  <tt class="py-line"><tt class="py-docstring">    slow!! ****** might only work for uint16 arr *********</tt> </tt>
<a name="L1964"></a><tt class="py-lineno">1964</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L1965"></a><tt class="py-lineno">1965</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt> <tt id="link-643" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-643', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">&lt;&lt;</tt><tt class="py-number">16</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-644" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-644', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">int32</tt> <tt class="py-op">)</tt> <tt class="py-comment"># bins</tt> </tt>
<a name="L1966"></a><tt class="py-lineno">1966</tt>  <tt class="py-line">    <tt class="py-op">(</tt><tt class="py-name">mi</tt><tt class="py-op">,</tt><tt class="py-name">ma</tt><tt class="py-op">,</tt><tt id="link-645" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-645', 'mean', 'link-217');">mean</a></tt><tt class="py-op">,</tt><tt id="link-646" class="py-name"><a title="Priithon.useful.stddev" class="py-name" href="#" onclick="return doclink('link-646', 'stddev', 'link-226');">stddev</a></tt><tt class="py-op">)</tt> <tt class="py-op">=</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt class="py-name">histogram2</tt><tt class="py-op">(</tt><tt class="py-name">img</tt><tt class="py-op">,</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">&lt;&lt;</tt><tt class="py-number">16</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L1967"></a><tt class="py-lineno">1967</tt>  <tt class="py-line">    <tt class="py-name">nPix</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">prod</tt><tt class="py-op">(</tt> <tt class="py-name">img</tt><tt class="py-op">.</tt><tt id="link-647" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-647', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">)</tt> </tt>
<a name="L1968"></a><tt class="py-lineno">1968</tt>  <tt class="py-line"> </tt>
<a name="L1969"></a><tt class="py-lineno">1969</tt>  <tt class="py-line"> </tt>
<a name="L1970"></a><tt class="py-lineno">1970</tt>  <tt class="py-line">    <tt class="py-comment">#non-sense 20090714: a = _getGoodifiedArray(a)</tt> </tt>
<a name="L1971"></a><tt class="py-lineno">1971</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">ma</tt> <tt class="py-op">=</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">ma</tt><tt class="py-op">)</tt> </tt>
<a name="L1972"></a><tt class="py-lineno">1972</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ma</tt> <tt class="py-op">&gt;=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L1973"></a><tt class="py-lineno">1973</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"U.topPercentile() works only for img values &lt; 65536"</tt> </tt>
<a name="L1974"></a><tt class="py-lineno">1974</tt>  <tt class="py-line">     </tt>
<a name="L1975"></a><tt class="py-lineno">1975</tt>  <tt class="py-line">    <tt class="py-name">tp</tt> <tt class="py-op">=</tt> <tt class="py-name">S</tt><tt class="py-op">.</tt><tt class="py-name">toppercentile</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">nPix</tt><tt class="py-op">,</tt> <tt class="py-name">ma</tt><tt class="py-op">,</tt> <tt class="py-name">percentile</tt><tt class="py-op">)</tt> </tt>
<a name="L1976"></a><tt class="py-lineno">1976</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">tp</tt> </tt>
</div><a name="L1977"></a><tt class="py-lineno">1977</tt>  <tt class="py-line"> </tt>
<a name="L1978"></a><tt class="py-lineno">1978</tt>  <tt class="py-line"><tt class="py-string">'''</tt> </tt>
<a name="L1979"></a><tt class="py-lineno">1979</tt>  <tt class="py-line"><tt class="py-string">def ffta(img):</tt> </tt>
<a name="L1980"></a><tt class="py-lineno">1980</tt>  <tt class="py-line"><tt class="py-string">    if len(img.shape) != 2:</tt> </tt>
<a name="L1981"></a><tt class="py-lineno">1981</tt>  <tt class="py-line"><tt class="py-string">        raise "2d only"</tt> </tt>
<a name="L1982"></a><tt class="py-lineno">1982</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1983"></a><tt class="py-lineno">1983</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1984"></a><tt class="py-lineno">1984</tt>  <tt class="py-line"><tt class="py-string">    import numarray as na</tt> </tt>
<a name="L1985"></a><tt class="py-lineno">1985</tt>  <tt class="py-line"><tt class="py-string">    from numarray import fft</tt> </tt>
<a name="L1986"></a><tt class="py-lineno">1986</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1987"></a><tt class="py-lineno">1987</tt>  <tt class="py-line"><tt class="py-string">    #f = fft.fft2d(img)</tt> </tt>
<a name="L1988"></a><tt class="py-lineno">1988</tt>  <tt class="py-line"><tt class="py-string">    #fr = na. abs( fft.real_fft2d(img).astype(na.Float32) ) </tt> </tt>
<a name="L1989"></a><tt class="py-lineno">1989</tt>  <tt class="py-line"><tt class="py-string">    #if img.type</tt> </tt>
<a name="L1990"></a><tt class="py-lineno">1990</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1991"></a><tt class="py-lineno">1991</tt>  <tt class="py-line"><tt class="py-string">    fa = fft.fft2d(img).astype(na.Complex32) # fixme single float fft ?</tt> </tt>
<a name="L1992"></a><tt class="py-lineno">1992</tt>  <tt class="py-line"><tt class="py-string">    fa = na.abs(fa) # we want Float     - copy...</tt> </tt>
<a name="L1993"></a><tt class="py-lineno">1993</tt>  <tt class="py-line"><tt class="py-string">    na.log10(fa,fa)</tt> </tt>
<a name="L1994"></a><tt class="py-lineno">1994</tt>  <tt class="py-line"><tt class="py-string">    fa[0,0] = 1</tt> </tt>
<a name="L1995"></a><tt class="py-lineno">1995</tt>  <tt class="py-line"><tt class="py-string">    return fa</tt> </tt>
<a name="L1996"></a><tt class="py-lineno">1996</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L1997"></a><tt class="py-lineno">1997</tt>  <tt class="py-line"><tt class="py-string">def fftc(img):</tt> </tt>
<a name="L1998"></a><tt class="py-lineno">1998</tt>  <tt class="py-line"><tt class="py-string">    if len(img.shape) != 2:</tt> </tt>
<a name="L1999"></a><tt class="py-lineno">1999</tt>  <tt class="py-line"><tt class="py-string">        raise "2d only"</tt> </tt>
<a name="L2000"></a><tt class="py-lineno">2000</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L2001"></a><tt class="py-lineno">2001</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L2002"></a><tt class="py-lineno">2002</tt>  <tt class="py-line"><tt class="py-string">    import numarray as na</tt> </tt>
<a name="L2003"></a><tt class="py-lineno">2003</tt>  <tt class="py-line"><tt class="py-string">    from numarray import fft</tt> </tt>
<a name="L2004"></a><tt class="py-lineno">2004</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L2005"></a><tt class="py-lineno">2005</tt>  <tt class="py-line"><tt class="py-string">    #f = fft.fft2d(img)</tt> </tt>
<a name="L2006"></a><tt class="py-lineno">2006</tt>  <tt class="py-line"><tt class="py-string">    #fr = na. abs( fft.real_fft2d(img).astype(na.Float32) ) </tt> </tt>
<a name="L2007"></a><tt class="py-lineno">2007</tt>  <tt class="py-line"><tt class="py-string">    #if img.type</tt> </tt>
<a name="L2008"></a><tt class="py-lineno">2008</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L2009"></a><tt class="py-lineno">2009</tt>  <tt class="py-line"><tt class="py-string">    fa = fft.fft2d(img).astype(na.Complex32) # fixme single float fft ?</tt> </tt>
<a name="L2010"></a><tt class="py-lineno">2010</tt>  <tt class="py-line"><tt class="py-string">    #na.abs(fa, fa)</tt> </tt>
<a name="L2011"></a><tt class="py-lineno">2011</tt>  <tt class="py-line"><tt class="py-string">    #na.log10(fa,fa)</tt> </tt>
<a name="L2012"></a><tt class="py-lineno">2012</tt>  <tt class="py-line"><tt class="py-string">    fa[0,0] = 0</tt> </tt>
<a name="L2013"></a><tt class="py-lineno">2013</tt>  <tt class="py-line"><tt class="py-string">    return fa</tt> </tt>
<a name="L2014"></a><tt class="py-lineno">2014</tt>  <tt class="py-line"><tt class="py-string">def fftcinv(img):</tt> </tt>
<a name="L2015"></a><tt class="py-lineno">2015</tt>  <tt class="py-line"><tt class="py-string">    if len(img.shape) != 2:</tt> </tt>
<a name="L2016"></a><tt class="py-lineno">2016</tt>  <tt class="py-line"><tt class="py-string">        raise "2d only"</tt> </tt>
<a name="L2017"></a><tt class="py-lineno">2017</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L2018"></a><tt class="py-lineno">2018</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L2019"></a><tt class="py-lineno">2019</tt>  <tt class="py-line"><tt class="py-string">    import numarray as na</tt> </tt>
<a name="L2020"></a><tt class="py-lineno">2020</tt>  <tt class="py-line"><tt class="py-string">    from numarray import fft</tt> </tt>
<a name="L2021"></a><tt class="py-lineno">2021</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L2022"></a><tt class="py-lineno">2022</tt>  <tt class="py-line"><tt class="py-string">    #f = fft.fft2d(img)</tt> </tt>
<a name="L2023"></a><tt class="py-lineno">2023</tt>  <tt class="py-line"><tt class="py-string">    #fr = na. abs( fft.real_fft2d(img).astype(na.Float32) ) </tt> </tt>
<a name="L2024"></a><tt class="py-lineno">2024</tt>  <tt class="py-line"><tt class="py-string">    #if img.type</tt> </tt>
<a name="L2025"></a><tt class="py-lineno">2025</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L2026"></a><tt class="py-lineno">2026</tt>  <tt class="py-line"><tt class="py-string">    fa = fft.inverse_fft2d(img).astype(na.Complex32) # fixme single float fft ?</tt> </tt>
<a name="L2027"></a><tt class="py-lineno">2027</tt>  <tt class="py-line"><tt class="py-string">    #na.abs(fa, fa)</tt> </tt>
<a name="L2028"></a><tt class="py-lineno">2028</tt>  <tt class="py-line"><tt class="py-string">    #na.log10(fa,fa)</tt> </tt>
<a name="L2029"></a><tt class="py-lineno">2029</tt>  <tt class="py-line"><tt class="py-string">    fa[0,0] = 0</tt> </tt>
<a name="L2030"></a><tt class="py-lineno">2030</tt>  <tt class="py-line"><tt class="py-string">    return fa</tt> </tt>
<a name="L2031"></a><tt class="py-lineno">2031</tt>  <tt class="py-line"><tt class="py-string">'''</tt> </tt>
<a name="l2norm"></a><div id="l2norm-def"><a name="L2032"></a><tt class="py-lineno">2032</tt> <a class="py-toggle" href="#" id="l2norm-toggle" onclick="return toggle('l2norm');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#l2norm">l2norm</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="l2norm-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="l2norm-expanded"><a name="L2033"></a><tt class="py-lineno">2033</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2034"></a><tt class="py-lineno">2034</tt>  <tt class="py-line"><tt class="py-docstring">    return the euclidian length of vector a</tt> </tt>
<a name="L2035"></a><tt class="py-lineno">2035</tt>  <tt class="py-line"><tt class="py-docstring">    return N.sqrt(a**2).sum())</tt> </tt>
<a name="L2036"></a><tt class="py-lineno">2036</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2037"></a><tt class="py-lineno">2037</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L2038"></a><tt class="py-lineno">2038</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-648" class="py-name"><a title="Priithon.mandel.sqrt
Priithon.plt.interface.sqrt
Priithon.plt.plot_objects.sqrt
Priithon.plt.plot_utility.sqrt
Priithon.plt.sqrt
Priithon.plt.wxplt.sqrt" class="py-name" href="#" onclick="return doclink('link-648', 'sqrt', 'link-175');">sqrt</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">**</tt><tt class="py-number">2</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2039"></a><tt class="py-lineno">2039</tt>  <tt class="py-line"> </tt>
<a name="l1norm"></a><div id="l1norm-def"><a name="L2040"></a><tt class="py-lineno">2040</tt> <a class="py-toggle" href="#" id="l1norm-toggle" onclick="return toggle('l1norm');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#l1norm">l1norm</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="l1norm-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="l1norm-expanded"><a name="L2041"></a><tt class="py-lineno">2041</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2042"></a><tt class="py-lineno">2042</tt>  <tt class="py-line"><tt class="py-docstring">    return the "abs"-norm of vector a</tt> </tt>
<a name="L2043"></a><tt class="py-lineno">2043</tt>  <tt class="py-line"><tt class="py-docstring">    return N.sum(abs(a))</tt> </tt>
<a name="L2044"></a><tt class="py-lineno">2044</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2045"></a><tt class="py-lineno">2045</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L2046"></a><tt class="py-lineno">2046</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-name">abs</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2047"></a><tt class="py-lineno">2047</tt>  <tt class="py-line"> </tt>
<a name="rms"></a><div id="rms-def"><a name="L2048"></a><tt class="py-lineno">2048</tt> <a class="py-toggle" href="#" id="rms-toggle" onclick="return toggle('rms');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#rms">rms</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="rms-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="rms-expanded"><a name="L2049"></a><tt class="py-lineno">2049</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2050"></a><tt class="py-lineno">2050</tt>  <tt class="py-line"><tt class="py-docstring">    returns root mean square (aka. the quadratic mean):</tt> </tt>
<a name="L2051"></a><tt class="py-lineno">2051</tt>  <tt class="py-line"><tt class="py-docstring">        (a**2).mean()**.5</tt> </tt>
<a name="L2052"></a><tt class="py-lineno">2052</tt>  <tt class="py-line"><tt class="py-docstring">    http://en.wikipedia.org/wiki/Root_mean_square</tt> </tt>
<a name="L2053"></a><tt class="py-lineno">2053</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2054"></a><tt class="py-lineno">2054</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asanyarray</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt>  <tt class="py-comment"># CHECK asanyarray or asarray</tt> </tt>
<a name="L2055"></a><tt class="py-lineno">2055</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">**</tt><tt class="py-number">2</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-649" class="py-name"><a title="Priithon.useful.mean" class="py-name" href="#" onclick="return doclink('link-649', 'mean', 'link-217');">mean</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">**</tt><tt class="py-number">.5</tt> </tt>
</div><a name="L2056"></a><tt class="py-lineno">2056</tt>  <tt class="py-line"> </tt>
<a name="L2057"></a><tt class="py-lineno">2057</tt>  <tt class="py-line"> </tt>
<a name="phase"></a><div id="phase-def"><a name="L2058"></a><tt class="py-lineno">2058</tt> <a class="py-toggle" href="#" id="phase-toggle" onclick="return toggle('phase');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#phase">phase</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="phase-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="phase-expanded"><a name="L2059"></a><tt class="py-lineno">2059</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2060"></a><tt class="py-lineno">2060</tt>  <tt class="py-line"><tt class="py-docstring">    returns N.arctan2(a.imag, a.real)</tt> </tt>
<a name="L2061"></a><tt class="py-lineno">2061</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2062"></a><tt class="py-lineno">2062</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-650" class="py-name" targets="Variable Priithon.mandel.arctan2=Priithon.mandel-module.html#arctan2,Variable Priithon.plt.arctan2=Priithon.plt-module.html#arctan2,Variable Priithon.plt.interface.arctan2=Priithon.plt.interface-module.html#arctan2,Variable Priithon.plt.plot_objects.arctan2=Priithon.plt.plot_objects-module.html#arctan2,Variable Priithon.plt.plot_utility.arctan2=Priithon.plt.plot_utility-module.html#arctan2,Variable Priithon.plt.wxplt.arctan2=Priithon.plt.wxplt-module.html#arctan2"><a title="Priithon.mandel.arctan2
Priithon.plt.arctan2
Priithon.plt.interface.arctan2
Priithon.plt.plot_objects.arctan2
Priithon.plt.plot_utility.arctan2
Priithon.plt.wxplt.arctan2" class="py-name" href="#" onclick="return doclink('link-650', 'arctan2', 'link-650');">arctan2</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">imag</tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">real</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2063"></a><tt class="py-lineno">2063</tt>  <tt class="py-line"> </tt>
<a name="polar2cplx"></a><div id="polar2cplx-def"><a name="L2064"></a><tt class="py-lineno">2064</tt> <a class="py-toggle" href="#" id="polar2cplx-toggle" onclick="return toggle('polar2cplx');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#polar2cplx">polar2cplx</a><tt class="py-op">(</tt><tt class="py-param">aAbs</tt><tt class="py-op">,</tt><tt class="py-param">aPhase</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="polar2cplx-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="polar2cplx-expanded"><a name="L2065"></a><tt class="py-lineno">2065</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2066"></a><tt class="py-lineno">2066</tt>  <tt class="py-line"><tt class="py-docstring">    returns new complex array 'a' with</tt> </tt>
<a name="L2067"></a><tt class="py-lineno">2067</tt>  <tt class="py-line"><tt class="py-docstring">    a.real = aAbs * N.cos(aPhase)</tt> </tt>
<a name="L2068"></a><tt class="py-lineno">2068</tt>  <tt class="py-line"><tt class="py-docstring">    a.imag = aAbs * N.sin(aPhase)</tt> </tt>
<a name="L2069"></a><tt class="py-lineno">2069</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2070"></a><tt class="py-lineno">2070</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">aAbs</tt><tt class="py-op">.</tt><tt id="link-651" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-651', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">type</tt> <tt class="py-op">==</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float32</tt><tt class="py-op">:</tt> </tt>
<a name="L2071"></a><tt class="py-lineno">2071</tt>  <tt class="py-line">        <tt id="link-652" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-652', 'dtype', 'link-19');">dtype</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">complex64</tt> </tt>
<a name="L2072"></a><tt class="py-lineno">2072</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt>   <tt class="py-comment"># HACK FIXME</tt> </tt>
<a name="L2073"></a><tt class="py-lineno">2073</tt>  <tt class="py-line">        <tt id="link-653" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-653', 'dtype', 'link-19');">dtype</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">complex128</tt> </tt>
<a name="L2074"></a><tt class="py-lineno">2074</tt>  <tt class="py-line"> </tt>
<a name="L2075"></a><tt class="py-lineno">2075</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-654" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-654', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-name">aAbs</tt><tt class="py-op">.</tt><tt id="link-655" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-655', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt> <tt id="link-656" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-656', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt id="link-657" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-657', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2076"></a><tt class="py-lineno">2076</tt>  <tt class="py-line">    <tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">real</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">aAbs</tt> <tt class="py-op">*</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-658" class="py-name" targets="Variable Priithon.mandel.cos=Priithon.mandel-module.html#cos,Variable Priithon.plt.cos=Priithon.plt-module.html#cos,Variable Priithon.plt.interface.cos=Priithon.plt.interface-module.html#cos,Variable Priithon.plt.plot_objects.cos=Priithon.plt.plot_objects-module.html#cos,Variable Priithon.plt.plot_utility.cos=Priithon.plt.plot_utility-module.html#cos,Variable Priithon.plt.wxplt.cos=Priithon.plt.wxplt-module.html#cos"><a title="Priithon.mandel.cos
Priithon.plt.cos
Priithon.plt.interface.cos
Priithon.plt.plot_objects.cos
Priithon.plt.plot_utility.cos
Priithon.plt.wxplt.cos" class="py-name" href="#" onclick="return doclink('link-658', 'cos', 'link-658');">cos</a></tt><tt class="py-op">(</tt><tt class="py-name">aPhase</tt><tt class="py-op">)</tt> </tt>
<a name="L2077"></a><tt class="py-lineno">2077</tt>  <tt class="py-line">    <tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">imag</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">aAbs</tt> <tt class="py-op">*</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-659" class="py-name" targets="Variable Priithon.mandel.sin=Priithon.mandel-module.html#sin,Variable Priithon.plt.interface.sin=Priithon.plt.interface-module.html#sin,Variable Priithon.plt.plot_objects.sin=Priithon.plt.plot_objects-module.html#sin,Variable Priithon.plt.plot_utility.sin=Priithon.plt.plot_utility-module.html#sin,Variable Priithon.plt.sin=Priithon.plt-module.html#sin,Variable Priithon.plt.wxplt.sin=Priithon.plt.wxplt-module.html#sin"><a title="Priithon.mandel.sin
Priithon.plt.interface.sin
Priithon.plt.plot_objects.sin
Priithon.plt.plot_utility.sin
Priithon.plt.sin
Priithon.plt.wxplt.sin" class="py-name" href="#" onclick="return doclink('link-659', 'sin', 'link-659');">sin</a></tt><tt class="py-op">(</tt><tt class="py-name">aPhase</tt><tt class="py-op">)</tt> </tt>
<a name="L2078"></a><tt class="py-lineno">2078</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">a</tt> </tt>
</div><a name="L2079"></a><tt class="py-lineno">2079</tt>  <tt class="py-line"> </tt>
<a name="L2080"></a><tt class="py-lineno">2080</tt>  <tt class="py-line"> </tt>
<a name="L2081"></a><tt class="py-lineno">2081</tt>  <tt class="py-line"> </tt>
<a name="rot90"></a><div id="rot90-def"><a name="L2082"></a><tt class="py-lineno">2082</tt> <a class="py-toggle" href="#" id="rot90-toggle" onclick="return toggle('rot90');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#rot90">rot90</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">n</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="rot90-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="rot90-expanded"><a name="L2083"></a><tt class="py-lineno">2083</tt>  <tt class="py-line">    <tt class="py-docstring">"""return a.copy() rotated</tt> </tt>
<a name="L2084"></a><tt class="py-lineno">2084</tt>  <tt class="py-line"><tt class="py-docstring">    n == 1 --&gt; counter-clockwise</tt> </tt>
<a name="L2085"></a><tt class="py-lineno">2085</tt>  <tt class="py-line"><tt class="py-docstring">    n == 2 --&gt; 180 degrees</tt> </tt>
<a name="L2086"></a><tt class="py-lineno">2086</tt>  <tt class="py-line"><tt class="py-docstring">    n == 3 --&gt; clockwise</tt> </tt>
<a name="L2087"></a><tt class="py-lineno">2087</tt>  <tt class="py-line"><tt class="py-docstring">    n ==-1 --&gt; clockwise</tt> </tt>
<a name="L2088"></a><tt class="py-lineno">2088</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2089"></a><tt class="py-lineno">2089</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">n</tt> <tt class="py-op">==</tt> <tt class="py-number">2</tt><tt class="py-op">:</tt> </tt>
<a name="L2090"></a><tt class="py-lineno">2090</tt>  <tt class="py-line">        <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">copy</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2091"></a><tt class="py-lineno">2091</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">b</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">:</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L2092"></a><tt class="py-lineno">2092</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2093"></a><tt class="py-lineno">2093</tt>  <tt class="py-line">        <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-660" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-660', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt> <tt class="py-name">a</tt> <tt class="py-op">)</tt> </tt>
<a name="L2094"></a><tt class="py-lineno">2094</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">n</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2095"></a><tt class="py-lineno">2095</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">b</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L2096"></a><tt class="py-lineno">2096</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt class="py-name">n</tt><tt class="py-op">==</tt><tt class="py-number">3</tt> <tt class="py-keyword">or</tt> <tt class="py-name">n</tt><tt class="py-op">==</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2097"></a><tt class="py-lineno">2097</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">b</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">,</tt><tt class="py-op">:</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L2098"></a><tt class="py-lineno">2098</tt>  <tt class="py-line">    <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"cannot rotated with n == %s"</tt><tt class="py-op">%</tt><tt class="py-name">n</tt> </tt>
</div><a name="L2099"></a><tt class="py-lineno">2099</tt>  <tt class="py-line">     </tt>
<a name="L2100"></a><tt class="py-lineno">2100</tt>  <tt class="py-line"> </tt>
<a name="project"></a><div id="project-def"><a name="L2101"></a><tt class="py-lineno">2101</tt> <a class="py-toggle" href="#" id="project-toggle" onclick="return toggle('project');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#project">project</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">axis</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="project-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="project-expanded"><a name="L2102"></a><tt class="py-lineno">2102</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2103"></a><tt class="py-lineno">2103</tt>  <tt class="py-line"><tt class="py-docstring">    returns maximum projection along given [old: 'first'(e.g. z)] axis</tt> </tt>
<a name="L2104"></a><tt class="py-lineno">2104</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2105"></a><tt class="py-lineno">2105</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-661" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-661', 'axis', 'link-177');">axis</a></tt> <tt class="py-op">&lt;</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L2106"></a><tt class="py-lineno">2106</tt>  <tt class="py-line">        <tt id="link-662" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-662', 'axis', 'link-177');">axis</a></tt> <tt class="py-op">+=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-663" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-663', 'ndim', 'link-532');">ndim</a></tt> </tt>
<a name="L2107"></a><tt class="py-lineno">2107</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-664" class="py-name"><a title="Priithon.mandel.maximum
Priithon.plt.interface.maximum
Priithon.plt.maximum
Priithon.plt.plot_objects.maximum
Priithon.plt.plot_utility.maximum
Priithon.plt.wxplt.maximum" class="py-name" href="#" onclick="return doclink('link-664', 'maximum', 'link-237');">maximum</a></tt><tt class="py-op">.</tt><tt class="py-name">reduce</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt> <tt id="link-665" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-665', 'axis', 'link-177');">axis</a></tt><tt class="py-op">)</tt> </tt>
</div><a name="L2108"></a><tt class="py-lineno">2108</tt>  <tt class="py-line"> </tt>
<a name="project_lowmem"></a><div id="project_lowmem-def"><a name="L2109"></a><tt class="py-lineno">2109</tt> <a class="py-toggle" href="#" id="project_lowmem-toggle" onclick="return toggle('project_lowmem');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#project_lowmem">project_lowmem</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">mode</tt><tt class="py-op">=</tt><tt class="py-string">'max'</tt><tt class="py-op">,</tt> <tt class="py-param">astype</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="project_lowmem-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="project_lowmem-expanded"><a name="L2110"></a><tt class="py-lineno">2110</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2111"></a><tt class="py-lineno">2111</tt>  <tt class="py-line"><tt class="py-docstring">    calc projection along axis 0</tt> </tt>
<a name="L2112"></a><tt class="py-lineno">2112</tt>  <tt class="py-line"><tt class="py-docstring">    `mode`: == "max" -&gt; calc maximum intensity projection</tt> </tt>
<a name="L2113"></a><tt class="py-lineno">2113</tt>  <tt class="py-line"><tt class="py-docstring">            == "mean" -&gt; calc mean intensity projection</tt> </tt>
<a name="L2114"></a><tt class="py-lineno">2114</tt>  <tt class="py-line"><tt class="py-docstring">                (accumulation is always done using float64)    </tt> </tt>
<a name="L2115"></a><tt class="py-lineno">2115</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2116"></a><tt class="py-lineno">2116</tt>  <tt class="py-line"><tt class="py-docstring">    `astype`: if not `None`, convert result before return</tt> </tt>
<a name="L2117"></a><tt class="py-lineno">2117</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2118"></a><tt class="py-lineno">2118</tt>  <tt class="py-line"><tt class="py-docstring">    this function "might"(!) save memory and might be faster, </tt> </tt>
<a name="L2119"></a><tt class="py-lineno">2119</tt>  <tt class="py-line"><tt class="py-docstring">    because iteration over the first axis is done "by hand"</tt> </tt>
<a name="L2120"></a><tt class="py-lineno">2120</tt>  <tt class="py-line"><tt class="py-docstring">    and does not rely on full convertion of a to an ndarray</tt> </tt>
<a name="L2121"></a><tt class="py-lineno">2121</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2122"></a><tt class="py-lineno">2122</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">mode</tt> <tt class="py-op">==</tt> <tt class="py-string">"max"</tt><tt class="py-op">:</tt> </tt>
<a name="L2123"></a><tt class="py-lineno">2123</tt>  <tt class="py-line">        <tt class="py-name">aProj</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">zeros</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-666" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-666', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-667" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-667', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2124"></a><tt class="py-lineno">2124</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">aSlice</tt> <tt class="py-keyword">in</tt> <tt class="py-name">a</tt><tt class="py-op">:</tt> </tt>
<a name="L2125"></a><tt class="py-lineno">2125</tt>  <tt class="py-line">            <tt class="py-name">aProj</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-668" class="py-name"><a title="Priithon.mandel.maximum
Priithon.plt.interface.maximum
Priithon.plt.maximum
Priithon.plt.plot_objects.maximum
Priithon.plt.plot_utility.maximum
Priithon.plt.wxplt.maximum" class="py-name" href="#" onclick="return doclink('link-668', 'maximum', 'link-237');">maximum</a></tt><tt class="py-op">(</tt><tt class="py-name">aProj</tt><tt class="py-op">,</tt> <tt class="py-name">aSlice</tt><tt class="py-op">)</tt> </tt>
<a name="L2126"></a><tt class="py-lineno">2126</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">mode</tt> <tt class="py-op">==</tt> <tt class="py-string">"mean"</tt><tt class="py-op">:</tt> </tt>
<a name="L2127"></a><tt class="py-lineno">2127</tt>  <tt class="py-line">        <tt class="py-name">aProj</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">zeros</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-669" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-669', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float64</tt><tt class="py-op">)</tt> </tt>
<a name="L2128"></a><tt class="py-lineno">2128</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">aSlice</tt> <tt class="py-keyword">in</tt> <tt class="py-name">a</tt><tt class="py-op">:</tt> </tt>
<a name="L2129"></a><tt class="py-lineno">2129</tt>  <tt class="py-line">            <tt class="py-name">aProj</tt> <tt class="py-op">+=</tt> <tt class="py-name">aSlice</tt> </tt>
<a name="L2130"></a><tt class="py-lineno">2130</tt>  <tt class="py-line">        <tt class="py-name">aProj</tt> <tt class="py-op">/=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L2131"></a><tt class="py-lineno">2131</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2132"></a><tt class="py-lineno">2132</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">(</tt><tt class="py-string">"mode must be one of 'mean' or 'max'."</tt><tt class="py-op">)</tt> </tt>
<a name="L2133"></a><tt class="py-lineno">2133</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">astype</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L2134"></a><tt class="py-lineno">2134</tt>  <tt class="py-line">        <tt class="py-name">aProj</tt> <tt class="py-op">=</tt> <tt class="py-name">aProj</tt><tt class="py-op">.</tt><tt class="py-name">astype</tt><tt class="py-op">(</tt><tt class="py-name">astype</tt><tt class="py-op">)</tt> </tt>
<a name="L2135"></a><tt class="py-lineno">2135</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">aProj</tt> </tt>
</div><a name="L2136"></a><tt class="py-lineno">2136</tt>  <tt class="py-line"> </tt>
<a name="L2137"></a><tt class="py-lineno">2137</tt>  <tt class="py-line"> </tt>
<a name="insert"></a><div id="insert-def"><a name="L2138"></a><tt class="py-lineno">2138</tt> <a class="py-toggle" href="#" id="insert-toggle" onclick="return toggle('insert');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#insert">insert</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">i</tt><tt class="py-op">,</tt> <tt class="py-param">entry</tt><tt class="py-op">,</tt> <tt class="py-param">axis</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="insert-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="insert-expanded"><a name="L2139"></a><tt class="py-lineno">2139</tt>  <tt class="py-line">    <tt class="py-docstring">"""returns new array with new element inserted at index i along axis</tt> </tt>
<a name="L2140"></a><tt class="py-lineno">2140</tt>  <tt class="py-line"><tt class="py-docstring">    if arr.ndim&gt;1 and if entry is scalar it gets filled in (ref. broadcasting)</tt> </tt>
<a name="L2141"></a><tt class="py-lineno">2141</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2142"></a><tt class="py-lineno">2142</tt>  <tt class="py-line"><tt class="py-docstring">    note: (original) arr does not get affected</tt> </tt>
<a name="L2143"></a><tt class="py-lineno">2143</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2144"></a><tt class="py-lineno">2144</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-670" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-670', 'i', 'link-65');">i</a></tt> <tt class="py-op">&gt;</tt> <tt id="link-671" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-671', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-672" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-672', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt id="link-673" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-673', 'axis', 'link-177');">axis</a></tt><tt class="py-op">]</tt><tt class="py-op">:</tt> </tt>
<a name="L2145"></a><tt class="py-lineno">2145</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">IndexError</tt><tt class="py-op">,</tt> <tt class="py-string">"index i larger than arr size"</tt> </tt>
<a name="L2146"></a><tt class="py-lineno">2146</tt>  <tt class="py-line">    <tt id="link-674" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-674', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-name">list</tt><tt class="py-op">(</tt><tt id="link-675" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-675', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-676" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-676', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2147"></a><tt class="py-lineno">2147</tt>  <tt class="py-line">    <tt id="link-677" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-677', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt id="link-678" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-678', 'axis', 'link-177');">axis</a></tt><tt class="py-op">]</tt> <tt class="py-op">+=</tt> <tt class="py-number">1</tt> </tt>
<a name="L2148"></a><tt class="py-lineno">2148</tt>  <tt class="py-line">    <tt class="py-name">a</tt><tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-679" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-679', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt id="link-680" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-680', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-681" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-681', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">,</tt> <tt id="link-682" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-682', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt id="link-683" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-683', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2149"></a><tt class="py-lineno">2149</tt>  <tt class="py-line">    <tt class="py-name">aa</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-684" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-684', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-op">[</tt><tt id="link-685" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-685', 'axis', 'link-177');">axis</a></tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt id="link-686" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-686', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt id="link-687" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-687', 'axis', 'link-177');">axis</a></tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt id="link-688" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-688', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt id="link-689" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-689', 'axis', 'link-177');">axis</a></tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-690" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-690', 'ndim', 'link-532');">ndim</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2150"></a><tt class="py-lineno">2150</tt>  <tt class="py-line">    <tt class="py-name">aarr</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-691" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-691', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt id="link-692" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-692', 'arr', 'link-41');">arr</a></tt><tt class="py-op">,</tt> <tt class="py-op">[</tt><tt id="link-693" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-693', 'axis', 'link-177');">axis</a></tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt id="link-694" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-694', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt id="link-695" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-695', 'axis', 'link-177');">axis</a></tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt id="link-696" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-696', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt id="link-697" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-697', 'axis', 'link-177');">axis</a></tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt id="link-698" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-698', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-699" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-699', 'ndim', 'link-532');">ndim</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2151"></a><tt class="py-lineno">2151</tt>  <tt class="py-line">    <tt class="py-name">aa</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt id="link-700" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-700', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt id="link-701" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-701', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> </tt>
<a name="L2152"></a><tt class="py-lineno">2152</tt>  <tt class="py-line">    <tt class="py-name">aa</tt><tt class="py-op">[</tt><tt id="link-702" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-702', 'i', 'link-65');">i</a></tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">aarr</tt><tt class="py-op">[</tt><tt id="link-703" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-703', 'i', 'link-65');">i</a></tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L2153"></a><tt class="py-lineno">2153</tt>  <tt class="py-line">    <tt class="py-name">aa</tt><tt class="py-op">[</tt><tt id="link-704" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-704', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">entry</tt> </tt>
<a name="L2154"></a><tt class="py-lineno">2154</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">a</tt> </tt>
</div><a name="L2155"></a><tt class="py-lineno">2155</tt>  <tt class="py-line"> </tt>
<a name="L2156"></a><tt class="py-lineno">2156</tt>  <tt class="py-line"> </tt>
<a name="L2157"></a><tt class="py-lineno">2157</tt>  <tt class="py-line"><tt class="py-comment">#######################################################################</tt> </tt>
<a name="L2158"></a><tt class="py-lineno">2158</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">######### stuff that works with float32 array (was: ... that uses Bettina's FORTRAN)</tt> </tt>
<a name="L2159"></a><tt class="py-lineno">2159</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#######################################################################</tt> </tt>
<a name="L2160"></a><tt class="py-lineno">2160</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="trans2d"></a><div id="trans2d-def"><a name="L2161"></a><tt class="py-lineno">2161</tt> <a class="py-toggle" href="#" id="trans2d-toggle" onclick="return toggle('trans2d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#trans2d">trans2d</a><tt class="py-op">(</tt><tt class="py-param">inArr</tt><tt class="py-op">,</tt> <tt class="py-param">outArr</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-param">tx</tt><tt class="py-op">,</tt><tt class="py-param">ty</tt><tt class="py-op">,</tt><tt class="py-param">rot</tt><tt class="py-op">,</tt><tt class="py-param">mag</tt><tt class="py-op">,</tt><tt class="py-param">gmag2_axis</tt><tt class="py-op">,</tt><tt class="py-param">gmag2</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="trans2d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="trans2d-expanded"><a name="L2162"></a><tt class="py-lineno">2162</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2163"></a><tt class="py-lineno">2163</tt>  <tt class="py-line"><tt class="py-docstring">    first translates by tx,ty</tt> </tt>
<a name="L2164"></a><tt class="py-lineno">2164</tt>  <tt class="py-line"><tt class="py-docstring">    THEN rotate and mag and aniso-mag</tt> </tt>
<a name="L2165"></a><tt class="py-lineno">2165</tt>  <tt class="py-line"><tt class="py-docstring">        (rotation relative to img-center !</tt> </tt>
<a name="L2166"></a><tt class="py-lineno">2166</tt>  <tt class="py-line"><tt class="py-docstring">         positive angle moves object counter-clockwise)</tt> </tt>
<a name="L2167"></a><tt class="py-lineno">2167</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2168"></a><tt class="py-lineno">2168</tt>  <tt class="py-line"><tt class="py-docstring">    if outArr is None ret</tt> </tt>
<a name="L2169"></a><tt class="py-lineno">2169</tt>  <tt class="py-line"><tt class="py-docstring">    NOTE: tx,ty go positive for right/up</tt> </tt>
<a name="L2170"></a><tt class="py-lineno">2170</tt>  <tt class="py-line"><tt class="py-docstring">    (Bettina's Fortran goes left/down !!!) </tt> </tt>
<a name="L2171"></a><tt class="py-lineno">2171</tt>  <tt class="py-line"><tt class="py-docstring">"""</tt> </tt>
<a name="L2172"></a><tt class="py-lineno">2172</tt>  <tt class="py-line">    <tt class="py-comment"># , (tx=0,ty=0,rot=0,mag=1,gmag2_axis=0,gmag2=1)):</tt> </tt>
<a name="L2173"></a><tt class="py-lineno">2173</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">ret</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L2174"></a><tt class="py-lineno">2174</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">outArr</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L2175"></a><tt class="py-lineno">2175</tt>  <tt class="py-line">        <tt class="py-name">outArr</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-705" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-705', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-name">inArr</tt><tt class="py-op">.</tt><tt id="link-706" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-706', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt> <tt id="link-707" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-707', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float32</tt><tt class="py-op">)</tt> </tt>
<a name="L2176"></a><tt class="py-lineno">2176</tt>  <tt class="py-line">        <tt class="py-name">ret</tt> <tt class="py-op">=</tt> <tt class="py-number">1</tt> </tt>
<a name="L2177"></a><tt class="py-lineno">2177</tt>  <tt class="py-line">    <tt id="link-708" class="py-name" targets="Function Priithon.useful.checkGoodArrayF()=Priithon.useful-module.html#checkGoodArrayF"><a title="Priithon.useful.checkGoodArrayF" class="py-name" href="#" onclick="return doclink('link-708', 'checkGoodArrayF', 'link-708');">checkGoodArrayF</a></tt><tt class="py-op">(</tt><tt class="py-name">outArr</tt><tt class="py-op">,</tt> <tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">inArr</tt><tt class="py-op">.</tt><tt id="link-709" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-709', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2178"></a><tt class="py-lineno">2178</tt>  <tt class="py-line"> </tt>
<a name="L2179"></a><tt class="py-lineno">2179</tt>  <tt class="py-line">    <tt class="py-name">inArr</tt> <tt class="py-op">=</tt> <tt id="link-710" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-710', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt class="py-name">inArr</tt><tt class="py-op">)</tt> </tt>
<a name="L2180"></a><tt class="py-lineno">2180</tt>  <tt class="py-line"> </tt>
<a name="L2181"></a><tt class="py-lineno">2181</tt>  <tt class="py-line">    <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-711" class="py-name" targets="Function Priithon.useful.trans2d()=Priithon.useful-module.html#trans2d"><a title="Priithon.useful.trans2d" class="py-name" href="#" onclick="return doclink('link-711', 'trans2d', 'link-711');">trans2d</a></tt><tt class="py-op">(</tt><tt class="py-name">inArr</tt><tt class="py-op">,</tt><tt class="py-name">outArr</tt><tt class="py-op">,</tt><tt class="py-op">(</tt><tt class="py-op">-</tt><tt class="py-name">tx</tt><tt class="py-op">,</tt><tt class="py-op">-</tt><tt class="py-name">ty</tt><tt class="py-op">,</tt>  <tt class="py-name">rot</tt><tt class="py-op">,</tt><tt class="py-name">mag</tt><tt class="py-op">,</tt> <tt class="py-name">gmag2_axis</tt><tt class="py-op">,</tt><tt class="py-name">gmag2</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L2182"></a><tt class="py-lineno">2182</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ret</tt><tt class="py-op">:</tt> </tt>
<a name="L2183"></a><tt class="py-lineno">2183</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">outArr</tt> </tt>
</div><a name="L2184"></a><tt class="py-lineno">2184</tt>  <tt class="py-line"> </tt>
<a name="L2185"></a><tt class="py-lineno">2185</tt>  <tt class="py-line"> </tt>
<a name="translate2d"></a><div id="translate2d-def"><a name="L2186"></a><tt class="py-lineno">2186</tt> <a class="py-toggle" href="#" id="translate2d-toggle" onclick="return toggle('translate2d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#translate2d">translate2d</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt><tt class="py-param">b</tt><tt class="py-op">,</tt><tt class="py-param">tx</tt><tt class="py-op">,</tt><tt class="py-param">ty</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="translate2d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="translate2d-expanded"><a name="L2187"></a><tt class="py-lineno">2187</tt>  <tt class="py-line">    <tt class="py-docstring">""" shift a in to b</tt> </tt>
<a name="L2188"></a><tt class="py-lineno">2188</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2189"></a><tt class="py-lineno">2189</tt>  <tt class="py-line"><tt class="py-docstring">    use bi-linear interpolation</tt> </tt>
<a name="L2190"></a><tt class="py-lineno">2190</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2191"></a><tt class="py-lineno">2191</tt>  <tt class="py-line"><tt class="py-docstring">    if b is None</tt> </tt>
<a name="L2192"></a><tt class="py-lineno">2192</tt>  <tt class="py-line"><tt class="py-docstring">      output array b is allocated and returned</tt> </tt>
<a name="L2193"></a><tt class="py-lineno">2193</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2194"></a><tt class="py-lineno">2194</tt>  <tt class="py-line"><tt class="py-docstring">    NOTE: tx,ty go positive for right/up</tt> </tt>
<a name="L2195"></a><tt class="py-lineno">2195</tt>  <tt class="py-line"><tt class="py-docstring">    (bettina's Fortran goes left/down !!!) </tt> </tt>
<a name="L2196"></a><tt class="py-lineno">2196</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2197"></a><tt class="py-lineno">2197</tt>  <tt class="py-line">    <tt class="py-name">rot</tt><tt class="py-op">,</tt><tt class="py-name">gmag</tt><tt class="py-op">,</tt><tt id="link-712" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-712', 'axis', 'link-177');">axis</a></tt><tt class="py-op">,</tt><tt class="py-name">gmag2</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">1</tt> </tt>
<a name="L2198"></a><tt class="py-lineno">2198</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-713" class="py-name"><a title="Priithon.useful.trans2d" class="py-name" href="#" onclick="return doclink('link-713', 'trans2d', 'link-711');">trans2d</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-name">b</tt><tt class="py-op">,</tt><tt class="py-op">(</tt><tt class="py-name">tx</tt><tt class="py-op">,</tt><tt class="py-name">ty</tt><tt class="py-op">,</tt>  <tt class="py-name">rot</tt><tt class="py-op">,</tt><tt class="py-name">gmag</tt><tt class="py-op">,</tt><tt id="link-714" class="py-name"><a title="Priithon.plt.interface.axis
Priithon.plt.wxplt.plot_canvas.axis" class="py-name" href="#" onclick="return doclink('link-714', 'axis', 'link-177');">axis</a></tt><tt class="py-op">,</tt><tt class="py-name">gmag2</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
</div><a name="L2199"></a><tt class="py-lineno">2199</tt>  <tt class="py-line"> </tt>
<a name="transmat2d"></a><div id="transmat2d-def"><a name="L2200"></a><tt class="py-lineno">2200</tt> <a class="py-toggle" href="#" id="transmat2d-toggle" onclick="return toggle('transmat2d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#transmat2d">transmat2d</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt><tt class="py-param">b</tt><tt class="py-op">,</tt><tt class="py-param">tx</tt><tt class="py-op">,</tt><tt class="py-param">ty</tt><tt class="py-op">,</tt> <tt class="py-param">m11</tt><tt class="py-op">,</tt><tt class="py-param">m12</tt><tt class="py-op">,</tt><tt class="py-param">m21</tt><tt class="py-op">,</tt><tt class="py-param">m22</tt><tt class="py-op">,</tt> <tt class="py-param">tx2</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-param">ty2</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="transmat2d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="transmat2d-expanded"><a name="L2201"></a><tt class="py-lineno">2201</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2202"></a><tt class="py-lineno">2202</tt>  <tt class="py-line"><tt class="py-docstring">    transform a(input) into b(output) :</tt> </tt>
<a name="L2203"></a><tt class="py-lineno">2203</tt>  <tt class="py-line"><tt class="py-docstring">    first translates by tx,ty</tt> </tt>
<a name="L2204"></a><tt class="py-lineno">2204</tt>  <tt class="py-line"><tt class="py-docstring">    THEN apply rotate/skew</tt> </tt>
<a name="L2205"></a><tt class="py-lineno">2205</tt>  <tt class="py-line"><tt class="py-docstring">        (rotation relative to img-center !</tt> </tt>
<a name="L2206"></a><tt class="py-lineno">2206</tt>  <tt class="py-line"><tt class="py-docstring">         positive angle moves object counter-clockwise)</tt> </tt>
<a name="L2207"></a><tt class="py-lineno">2207</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2208"></a><tt class="py-lineno">2208</tt>  <tt class="py-line"><tt class="py-docstring">    (m11 m12)  is the 2d transformation matrix</tt> </tt>
<a name="L2209"></a><tt class="py-lineno">2209</tt>  <tt class="py-line"><tt class="py-docstring">    (m21 m22) </tt> </tt>
<a name="L2210"></a><tt class="py-lineno">2210</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2211"></a><tt class="py-lineno">2211</tt>  <tt class="py-line"><tt class="py-docstring">    use bi-linear interpolation</tt> </tt>
<a name="L2212"></a><tt class="py-lineno">2212</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2213"></a><tt class="py-lineno">2213</tt>  <tt class="py-line"><tt class="py-docstring">    NOTE: tx,ty go positive for right/up</tt> </tt>
<a name="L2214"></a><tt class="py-lineno">2214</tt>  <tt class="py-line"><tt class="py-docstring">    (Bettina's Fortran goes left/down !!!)</tt> </tt>
<a name="L2215"></a><tt class="py-lineno">2215</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2216"></a><tt class="py-lineno">2216</tt>  <tt class="py-line"><tt class="py-docstring">    tx2,ty2 is for an extra translating ?? before OR after ?&gt;??</tt> </tt>
<a name="L2217"></a><tt class="py-lineno">2217</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2218"></a><tt class="py-lineno">2218</tt>  <tt class="py-line">    <tt id="link-715" class="py-name"><a title="Priithon.useful.checkGoodArrayF" class="py-name" href="#" onclick="return doclink('link-715', 'checkGoodArrayF', 'link-708');">checkGoodArrayF</a></tt><tt class="py-op">(</tt><tt class="py-name">b</tt><tt class="py-op">,</tt> <tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-716" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-716', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2219"></a><tt class="py-lineno">2219</tt>  <tt class="py-line"> </tt>
<a name="L2220"></a><tt class="py-lineno">2220</tt>  <tt class="py-line">    <tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nx</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-717" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-717', 'shape', 'link-58');">shape</a></tt> </tt>
<a name="L2221"></a><tt class="py-lineno">2221</tt>  <tt class="py-line">    <tt class="py-comment">#20050502  # now we have a '-' here !!!!</tt> </tt>
<a name="L2222"></a><tt class="py-lineno">2222</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">xc</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">nx</tt> <tt class="py-op">-</tt> <tt class="py-number">1.</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-number">.5</tt> <tt class="py-op">+</tt> <tt class="py-op">-</tt><tt class="py-name">tx</tt>  <tt class="py-comment"># ! Center of image.</tt> </tt>
<a name="L2223"></a><tt class="py-lineno">2223</tt>  <tt class="py-line">    <tt class="py-name">yc</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">ny</tt> <tt class="py-op">-</tt> <tt class="py-number">1.</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-number">.5</tt> <tt class="py-op">+</tt> <tt class="py-op">-</tt><tt class="py-name">ty</tt> </tt>
<a name="L2224"></a><tt class="py-lineno">2224</tt>  <tt class="py-line"> </tt>
<a name="L2225"></a><tt class="py-lineno">2225</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt id="link-718" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-718', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L2226"></a><tt class="py-lineno">2226</tt>  <tt class="py-line"> </tt>
<a name="L2227"></a><tt class="py-lineno">2227</tt>  <tt class="py-line">    <tt class="py-name">S</tt><tt class="py-op">.</tt><tt class="py-name">binterp2d</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-name">b</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-name">m11</tt><tt class="py-op">,</tt><tt class="py-name">m12</tt><tt class="py-op">,</tt><tt class="py-name">m21</tt><tt class="py-op">,</tt><tt class="py-name">m22</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">xc</tt><tt class="py-op">,</tt><tt class="py-name">yc</tt><tt class="py-op">,</tt>  <tt class="py-name">tx2</tt><tt class="py-op">,</tt><tt class="py-name">ty2</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2228"></a><tt class="py-lineno">2228</tt>  <tt class="py-line"> </tt>
<a name="L2229"></a><tt class="py-lineno">2229</tt>  <tt class="py-line"> </tt>
<a name="L2230"></a><tt class="py-lineno">2230</tt>  <tt class="py-line"> </tt>
<a name="rot3d"></a><div id="rot3d-def"><a name="L2231"></a><tt class="py-lineno">2231</tt> <a class="py-toggle" href="#" id="rot3d-toggle" onclick="return toggle('rot3d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#rot3d">rot3d</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt><tt class="py-param">b</tt><tt class="py-op">,</tt> <tt class="py-param">angle</tt><tt class="py-op">,</tt> <tt class="py-param">rot_axis</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="rot3d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="rot3d-expanded"><a name="L2232"></a><tt class="py-lineno">2232</tt>  <tt class="py-line">    <tt class="py-docstring">""" </tt> </tt>
<a name="L2233"></a><tt class="py-lineno">2233</tt>  <tt class="py-line"><tt class="py-docstring">    a: 3d input array</tt> </tt>
<a name="L2234"></a><tt class="py-lineno">2234</tt>  <tt class="py-line"><tt class="py-docstring">    b: 3d output array</tt> </tt>
<a name="L2235"></a><tt class="py-lineno">2235</tt>  <tt class="py-line"><tt class="py-docstring">    angle: in degree,</tt> </tt>
<a name="L2236"></a><tt class="py-lineno">2236</tt>  <tt class="py-line"><tt class="py-docstring">    rot_axis: axis to rotate the object about</tt> </tt>
<a name="L2237"></a><tt class="py-lineno">2237</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2238"></a><tt class="py-lineno">2238</tt>  <tt class="py-line"> </tt>
<a name="L2239"></a><tt class="py-lineno">2239</tt>  <tt class="py-line">    <tt id="link-719" class="py-name"><a title="Priithon.useful.checkGoodArrayF" class="py-name" href="#" onclick="return doclink('link-719', 'checkGoodArrayF', 'link-708');">checkGoodArrayF</a></tt><tt class="py-op">(</tt><tt class="py-name">b</tt><tt class="py-op">,</tt> <tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-720" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-720', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2240"></a><tt class="py-lineno">2240</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt id="link-721" class="py-name"><a title="Priithon.useful._getGoodifiedArray" class="py-name" href="#" onclick="return doclink('link-721', '_getGoodifiedArray', 'link-179');">_getGoodifiedArray</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L2241"></a><tt class="py-lineno">2241</tt>  <tt class="py-line">     </tt>
<a name="L2242"></a><tt class="py-lineno">2242</tt>  <tt class="py-line">    <tt class="py-name">cdr</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-722" class="py-name" targets="Variable Priithon.mandel.arctan=Priithon.mandel-module.html#arctan,Variable Priithon.plt.arctan=Priithon.plt-module.html#arctan,Variable Priithon.plt.interface.arctan=Priithon.plt.interface-module.html#arctan,Variable Priithon.plt.plot_objects.arctan=Priithon.plt.plot_objects-module.html#arctan,Variable Priithon.plt.plot_utility.arctan=Priithon.plt.plot_utility-module.html#arctan,Variable Priithon.plt.wxplt.arctan=Priithon.plt.wxplt-module.html#arctan"><a title="Priithon.mandel.arctan
Priithon.plt.arctan
Priithon.plt.interface.arctan
Priithon.plt.plot_objects.arctan
Priithon.plt.plot_utility.arctan
Priithon.plt.wxplt.arctan" class="py-name" href="#" onclick="return doclink('link-722', 'arctan', 'link-722');">arctan</a></tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">/</tt> <tt class="py-number">45</tt> </tt>
<a name="L2243"></a><tt class="py-lineno">2243</tt>  <tt class="py-line">    <tt class="py-name">c</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-723" class="py-name"><a title="Priithon.mandel.cos
Priithon.plt.cos
Priithon.plt.interface.cos
Priithon.plt.plot_objects.cos
Priithon.plt.plot_utility.cos
Priithon.plt.wxplt.cos" class="py-name" href="#" onclick="return doclink('link-723', 'cos', 'link-658');">cos</a></tt><tt class="py-op">(</tt><tt class="py-name">angle</tt><tt class="py-op">*</tt><tt class="py-name">cdr</tt><tt class="py-op">)</tt> </tt>
<a name="L2244"></a><tt class="py-lineno">2244</tt>  <tt class="py-line">    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-724" class="py-name"><a title="Priithon.mandel.sin
Priithon.plt.interface.sin
Priithon.plt.plot_objects.sin
Priithon.plt.plot_utility.sin
Priithon.plt.sin
Priithon.plt.wxplt.sin" class="py-name" href="#" onclick="return doclink('link-724', 'sin', 'link-659');">sin</a></tt><tt class="py-op">(</tt><tt class="py-name">angle</tt><tt class="py-op">*</tt><tt class="py-name">cdr</tt><tt class="py-op">)</tt> </tt>
<a name="L2245"></a><tt class="py-lineno">2245</tt>  <tt class="py-line"> </tt>
<a name="L2246"></a><tt class="py-lineno">2246</tt>  <tt class="py-line">    <tt class="py-name">tx</tt><tt class="py-op">=</tt><tt class="py-name">ty</tt><tt class="py-op">=</tt><tt class="py-name">tz</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L2247"></a><tt class="py-lineno">2247</tt>  <tt class="py-line"> </tt>
<a name="L2248"></a><tt class="py-lineno">2248</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-725" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-725', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">2</tt><tt class="py-op">:</tt> </tt>
<a name="L2249"></a><tt class="py-lineno">2249</tt>  <tt class="py-line">        <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-726" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-726', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2250"></a><tt class="py-lineno">2250</tt>  <tt class="py-line">        <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">b</tt><tt class="py-op">.</tt><tt id="link-727" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-727', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt>         </tt>
<a name="L2251"></a><tt class="py-lineno">2251</tt>  <tt class="py-line">        <tt class="py-name">b</tt><tt class="py-op">.</tt><tt id="link-728" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-728', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-729" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-729', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-730" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-730', 'shape', 'link-58');">shape</a></tt> </tt>
<a name="L2252"></a><tt class="py-lineno">2252</tt>  <tt class="py-line"> </tt>
<a name="L2253"></a><tt class="py-lineno">2253</tt>  <tt class="py-line">    <tt class="py-name">xoff</tt><tt class="py-op">=</tt><tt class="py-number">0.5</tt><tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-731" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-731', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L2254"></a><tt class="py-lineno">2254</tt>  <tt class="py-line">    <tt class="py-name">yoff</tt><tt class="py-op">=</tt><tt class="py-number">0.5</tt><tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-732" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-732', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L2255"></a><tt class="py-lineno">2255</tt>  <tt class="py-line">    <tt class="py-name">zoff</tt><tt class="py-op">=</tt><tt class="py-number">0.5</tt><tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-733" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-733', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L2256"></a><tt class="py-lineno">2256</tt>  <tt class="py-line">    <tt class="py-name">xc</tt><tt class="py-op">=</tt><tt class="py-name">xoff</tt><tt class="py-op">+</tt><tt class="py-name">tx</tt>                                    <tt class="py-comment"># Shift by -xt, -yt,-zt.</tt> </tt>
<a name="L2257"></a><tt class="py-lineno">2257</tt>  <tt class="py-line">    <tt class="py-name">yc</tt><tt class="py-op">=</tt><tt class="py-name">yoff</tt><tt class="py-op">+</tt><tt class="py-name">ty</tt> </tt>
<a name="L2258"></a><tt class="py-lineno">2258</tt>  <tt class="py-line">    <tt class="py-name">zc</tt><tt class="py-op">=</tt><tt class="py-name">zoff</tt><tt class="py-op">+</tt><tt class="py-name">tz</tt>  </tt>
<a name="L2259"></a><tt class="py-lineno">2259</tt>  <tt class="py-line"> </tt>
<a name="L2260"></a><tt class="py-lineno">2260</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">rot_axis</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L2261"></a><tt class="py-lineno">2261</tt>  <tt class="py-line">        <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-734" class="py-name" targets="Function Priithon.useful.rot3d()=Priithon.useful-module.html#rot3d"><a title="Priithon.useful.rot3d" class="py-name" href="#" onclick="return doclink('link-734', 'rot3d', 'link-734');">rot3d</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-name">b</tt><tt class="py-op">,</tt> </tt>
<a name="L2262"></a><tt class="py-lineno">2262</tt>  <tt class="py-line">                <tt class="py-op">(</tt> <tt class="py-name">c</tt><tt class="py-op">,</tt><tt class="py-op">-</tt><tt class="py-name">s</tt><tt class="py-op">,</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> </tt>
<a name="L2263"></a><tt class="py-lineno">2263</tt>  <tt class="py-line">                  <tt class="py-name">s</tt><tt class="py-op">,</tt> <tt class="py-name">c</tt><tt class="py-op">,</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> </tt>
<a name="L2264"></a><tt class="py-lineno">2264</tt>  <tt class="py-line">                  <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L2265"></a><tt class="py-lineno">2265</tt>  <tt class="py-line">                <tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">xoff</tt><tt class="py-op">,</tt><tt class="py-name">yoff</tt><tt class="py-op">,</tt><tt class="py-name">zoff</tt><tt class="py-op">,</tt><tt class="py-name">xc</tt><tt class="py-op">,</tt><tt class="py-name">yc</tt><tt class="py-op">,</tt><tt class="py-name">zc</tt><tt class="py-op">)</tt> </tt>
<a name="L2266"></a><tt class="py-lineno">2266</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">rot_axis</tt><tt class="py-op">==</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2267"></a><tt class="py-lineno">2267</tt>  <tt class="py-line">        <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-735" class="py-name"><a title="Priithon.useful.rot3d" class="py-name" href="#" onclick="return doclink('link-735', 'rot3d', 'link-734');">rot3d</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-name">b</tt><tt class="py-op">,</tt> </tt>
<a name="L2268"></a><tt class="py-lineno">2268</tt>  <tt class="py-line">                <tt class="py-op">(</tt> <tt class="py-name">c</tt><tt class="py-op">,</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-name">s</tt><tt class="py-op">,</tt> </tt>
<a name="L2269"></a><tt class="py-lineno">2269</tt>  <tt class="py-line">                  <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> </tt>
<a name="L2270"></a><tt class="py-lineno">2270</tt>  <tt class="py-line">                 <tt class="py-op">-</tt><tt class="py-name">s</tt><tt class="py-op">,</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-name">c</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L2271"></a><tt class="py-lineno">2271</tt>  <tt class="py-line">                <tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">xoff</tt><tt class="py-op">,</tt><tt class="py-name">yoff</tt><tt class="py-op">,</tt><tt class="py-name">zoff</tt><tt class="py-op">,</tt><tt class="py-name">xc</tt><tt class="py-op">,</tt><tt class="py-name">yc</tt><tt class="py-op">,</tt><tt class="py-name">zc</tt><tt class="py-op">)</tt> </tt>
<a name="L2272"></a><tt class="py-lineno">2272</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">rot_axis</tt><tt class="py-op">==</tt><tt class="py-number">2</tt><tt class="py-op">:</tt> </tt>
<a name="L2273"></a><tt class="py-lineno">2273</tt>  <tt class="py-line">        <tt class="py-name">S</tt><tt class="py-op">.</tt><tt id="link-736" class="py-name"><a title="Priithon.useful.rot3d" class="py-name" href="#" onclick="return doclink('link-736', 'rot3d', 'link-734');">rot3d</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-name">b</tt><tt class="py-op">,</tt> </tt>
<a name="L2274"></a><tt class="py-lineno">2274</tt>  <tt class="py-line">                <tt class="py-op">(</tt> <tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> </tt>
<a name="L2275"></a><tt class="py-lineno">2275</tt>  <tt class="py-line">                  <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-name">c</tt><tt class="py-op">,</tt><tt class="py-op">-</tt><tt class="py-name">s</tt><tt class="py-op">,</tt> </tt>
<a name="L2276"></a><tt class="py-lineno">2276</tt>  <tt class="py-line">                  <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-name">s</tt><tt class="py-op">,</tt> <tt class="py-name">c</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> </tt>
<a name="L2277"></a><tt class="py-lineno">2277</tt>  <tt class="py-line">                <tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">xoff</tt><tt class="py-op">,</tt><tt class="py-name">yoff</tt><tt class="py-op">,</tt><tt class="py-name">zoff</tt><tt class="py-op">,</tt><tt class="py-name">xc</tt><tt class="py-op">,</tt><tt class="py-name">yc</tt><tt class="py-op">,</tt><tt class="py-name">zc</tt><tt class="py-op">)</tt> </tt>
<a name="L2278"></a><tt class="py-lineno">2278</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2279"></a><tt class="py-lineno">2279</tt>  <tt class="py-line">        <tt class="py-keyword">print</tt> <tt class="py-string">"*** bad rot_axis ***"</tt> </tt>
</div><a name="L2280"></a><tt class="py-lineno">2280</tt>  <tt class="py-line">         </tt>
<a name="L2281"></a><tt class="py-lineno">2281</tt>  <tt class="py-line"> </tt>
<a name="L2282"></a><tt class="py-lineno">2282</tt>  <tt class="py-line"><tt class="py-comment">#######################################################################</tt> </tt>
<a name="L2283"></a><tt class="py-lineno">2283</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">######### stuff that used PIL</tt> </tt>
<a name="L2284"></a><tt class="py-lineno">2284</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#######################################################################</tt> </tt>
<a name="L2285"></a><tt class="py-lineno">2285</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="_getImgMode"></a><div id="_getImgMode-def"><a name="L2286"></a><tt class="py-lineno">2286</tt> <a class="py-toggle" href="#" id="_getImgMode-toggle" onclick="return toggle('_getImgMode');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_getImgMode">_getImgMode</a><tt class="py-op">(</tt><tt class="py-param">im</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_getImgMode-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_getImgMode-expanded"><a name="L2287"></a><tt class="py-lineno">2287</tt>  <tt class="py-line">    <tt class="py-name">cols</tt> <tt class="py-op">=</tt> <tt class="py-number">1</tt> </tt>
<a name="L2288"></a><tt class="py-lineno">2288</tt>  <tt class="py-line">    <tt class="py-name">BigEndian</tt> <tt class="py-op">=</tt> <tt id="link-737" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-737', 'False', 'link-28');">False</a></tt> </tt>
<a name="L2289"></a><tt class="py-lineno">2289</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt>   <tt class="py-op">==</tt> <tt class="py-string">"1"</tt><tt class="py-op">:</tt> </tt>
<a name="L2290"></a><tt class="py-lineno">2290</tt>  <tt class="py-line">        <tt class="py-name">t</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt> </tt>
<a name="L2291"></a><tt class="py-lineno">2291</tt>  <tt class="py-line">        <tt class="py-name">cols</tt> <tt class="py-op">=</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt> </tt>
<a name="L2292"></a><tt class="py-lineno">2292</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt> <tt class="py-op">==</tt> <tt class="py-string">"L"</tt> <tt class="py-keyword">or</tt> \ </tt>
<a name="L2293"></a><tt class="py-lineno">2293</tt>  <tt class="py-line">         <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt> <tt class="py-op">==</tt> <tt class="py-string">"P"</tt><tt class="py-op">:</tt> <tt class="py-comment">#(8-bit pixels, mapped to any other mode using a colour palette)</tt> </tt>
<a name="L2294"></a><tt class="py-lineno">2294</tt>  <tt class="py-line">        <tt class="py-name">t</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt> </tt>
<a name="L2295"></a><tt class="py-lineno">2295</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt> <tt class="py-op">==</tt> <tt class="py-string">"I;16"</tt><tt class="py-op">:</tt> </tt>
<a name="L2296"></a><tt class="py-lineno">2296</tt>  <tt class="py-line">        <tt class="py-name">t</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint16</tt> </tt>
<a name="L2297"></a><tt class="py-lineno">2297</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt> <tt class="py-op">==</tt> <tt class="py-string">"I"</tt><tt class="py-op">:</tt> </tt>
<a name="L2298"></a><tt class="py-lineno">2298</tt>  <tt class="py-line">        <tt class="py-name">t</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint32</tt> </tt>
<a name="L2299"></a><tt class="py-lineno">2299</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt> <tt class="py-op">==</tt> <tt class="py-string">"F"</tt><tt class="py-op">:</tt> </tt>
<a name="L2300"></a><tt class="py-lineno">2300</tt>  <tt class="py-line">        <tt class="py-name">t</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float32</tt> </tt>
<a name="L2301"></a><tt class="py-lineno">2301</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt> <tt class="py-op">==</tt> <tt class="py-string">"RGB"</tt><tt class="py-op">:</tt> </tt>
<a name="L2302"></a><tt class="py-lineno">2302</tt>  <tt class="py-line">        <tt class="py-name">t</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt> </tt>
<a name="L2303"></a><tt class="py-lineno">2303</tt>  <tt class="py-line">        <tt class="py-name">cols</tt> <tt class="py-op">=</tt> <tt class="py-number">3</tt> </tt>
<a name="L2304"></a><tt class="py-lineno">2304</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt> <tt class="py-keyword">in</tt> <tt class="py-op">(</tt><tt class="py-string">"RGBA"</tt><tt class="py-op">,</tt> <tt class="py-string">"CMYK"</tt><tt class="py-op">,</tt> <tt class="py-string">"RGBX"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2305"></a><tt class="py-lineno">2305</tt>  <tt class="py-line">        <tt class="py-name">t</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt> </tt>
<a name="L2306"></a><tt class="py-lineno">2306</tt>  <tt class="py-line">        <tt class="py-name">cols</tt> <tt class="py-op">=</tt> <tt class="py-number">4</tt> </tt>
<a name="L2307"></a><tt class="py-lineno">2307</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt> <tt class="py-op">==</tt> <tt class="py-string">"I;16B"</tt><tt class="py-op">:</tt>  <tt class="py-comment">## big endian</tt> </tt>
<a name="L2308"></a><tt class="py-lineno">2308</tt>  <tt class="py-line">        <tt class="py-name">t</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint16</tt> </tt>
<a name="L2309"></a><tt class="py-lineno">2309</tt>  <tt class="py-line">        <tt class="py-name">BigEndian</tt> <tt class="py-op">=</tt> <tt id="link-738" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-738', 'True', 'link-38');">True</a></tt> </tt>
<a name="L2310"></a><tt class="py-lineno">2310</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2311"></a><tt class="py-lineno">2311</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"can only convert single-layer images (mode: %s)"</tt> <tt class="py-op">%</tt> <tt class="py-op">(</tt><tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">mode</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> </tt>
<a name="L2312"></a><tt class="py-lineno">2312</tt>  <tt class="py-line"> </tt>
<a name="L2313"></a><tt class="py-lineno">2313</tt>  <tt class="py-line">    <tt class="py-name">nx</tt><tt class="py-op">,</tt><tt class="py-name">ny</tt> <tt class="py-op">=</tt> <tt class="py-name">im</tt><tt class="py-op">.</tt><tt id="link-739" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-739', 'size', 'link-107');">size</a></tt> </tt>
<a name="L2314"></a><tt class="py-lineno">2314</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">sys</tt> </tt>
<a name="L2315"></a><tt class="py-lineno">2315</tt>  <tt class="py-line">    <tt class="py-name">isSwapped</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">BigEndian</tt> <tt class="py-keyword">and</tt> <tt class="py-name">sys</tt><tt class="py-op">.</tt><tt class="py-name">byteorder</tt><tt class="py-op">==</tt><tt class="py-string">'little'</tt> <tt class="py-keyword">or</tt> <tt class="py-keyword">not</tt> <tt class="py-name">BigEndian</tt> <tt class="py-keyword">and</tt> <tt class="py-name">sys</tt><tt class="py-op">.</tt><tt class="py-name">byteorder</tt> <tt class="py-op">==</tt> <tt class="py-string">'big'</tt><tt class="py-op">)</tt> </tt>
<a name="L2316"></a><tt class="py-lineno">2316</tt>  <tt class="py-line">         </tt>
<a name="L2317"></a><tt class="py-lineno">2317</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">t</tt><tt class="py-op">,</tt><tt class="py-name">cols</tt><tt class="py-op">,</tt> <tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nx</tt><tt class="py-op">,</tt> <tt class="py-name">isSwapped</tt> </tt>
</div><a name="L2318"></a><tt class="py-lineno">2318</tt>  <tt class="py-line"> </tt>
<a name="L2319"></a><tt class="py-lineno">2319</tt>  <tt class="py-line"> </tt>
<a name="image2array"></a><div id="image2array-def"><a name="L2320"></a><tt class="py-lineno">2320</tt> <a class="py-toggle" href="#" id="image2array-toggle" onclick="return toggle('image2array');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#image2array">image2array</a><tt class="py-op">(</tt><tt class="py-param">im</tt><tt class="py-op">,</tt> <tt class="py-param">i0</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-param">iDelta</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-param">squeezeGreyRGB</tt><tt class="py-op">=</tt><tt id="link-740" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-740', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="image2array-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="image2array-expanded"><a name="L2321"></a><tt class="py-lineno">2321</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2322"></a><tt class="py-lineno">2322</tt>  <tt class="py-line"><tt class="py-docstring">    Convert image to numpy array</tt> </tt>
<a name="L2323"></a><tt class="py-lineno">2323</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2324"></a><tt class="py-lineno">2324</tt>  <tt class="py-line"><tt class="py-docstring">    if i0 is None:</tt> </tt>
<a name="L2325"></a><tt class="py-lineno">2325</tt>  <tt class="py-line"><tt class="py-docstring">           just read next section (no im.seek !) and </tt> </tt>
<a name="L2326"></a><tt class="py-lineno">2326</tt>  <tt class="py-line"><tt class="py-docstring">           convert and return 2d array </tt> </tt>
<a name="L2327"></a><tt class="py-lineno">2327</tt>  <tt class="py-line"><tt class="py-docstring">    if squeezeGreyRGB:</tt> </tt>
<a name="L2328"></a><tt class="py-lineno">2328</tt>  <tt class="py-line"><tt class="py-docstring">       test if an RGB (RGBA) image really just grey - </tt> </tt>
<a name="L2329"></a><tt class="py-lineno">2329</tt>  <tt class="py-line"><tt class="py-docstring">         then return only one channel (others are identical)</tt> </tt>
<a name="L2330"></a><tt class="py-lineno">2330</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2331"></a><tt class="py-lineno">2331</tt>  <tt class="py-line">     </tt>
<a name="L2332"></a><tt class="py-lineno">2332</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">Image</tt> </tt>
<a name="L2333"></a><tt class="py-lineno">2333</tt>  <tt class="py-line"> </tt>
<a name="L2334"></a><tt class="py-lineno">2334</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">i0</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L2335"></a><tt class="py-lineno">2335</tt>  <tt class="py-line">        <tt class="py-comment">#HACK for multipage images</tt> </tt>
<a name="L2336"></a><tt class="py-lineno">2336</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-name">nn</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L2337"></a><tt class="py-lineno">2337</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt id="link-741" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-741', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">xrange</tt><tt class="py-op">(</tt><tt class="py-name">i0</tt><tt class="py-op">,</tt> <tt class="py-number">100000</tt><tt class="py-op">,</tt> <tt class="py-name">iDelta</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2338"></a><tt class="py-lineno">2338</tt>  <tt class="py-line">            <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L2339"></a><tt class="py-lineno">2339</tt>  <tt class="py-line">                <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt id="link-742" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-742', 'i', 'link-65');">i</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2340"></a><tt class="py-lineno">2340</tt>  <tt class="py-line">                <tt class="py-name">nn</tt><tt class="py-op">+=</tt><tt class="py-number">1</tt> </tt>
<a name="L2341"></a><tt class="py-lineno">2341</tt>  <tt class="py-line">            <tt class="py-keyword">except</tt> <tt class="py-name">EOFError</tt><tt class="py-op">:</tt> </tt>
<a name="L2342"></a><tt class="py-lineno">2342</tt>  <tt class="py-line">                <tt class="py-keyword">break</tt> </tt>
<a name="L2343"></a><tt class="py-lineno">2343</tt>  <tt class="py-line">        <tt class="py-comment">#def getLayerlayerToArray</tt> </tt>
<a name="L2344"></a><tt class="py-lineno">2344</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L2345"></a><tt class="py-lineno">2345</tt>  <tt class="py-line">        <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt class="py-name">i0</tt><tt class="py-op">)</tt> <tt class="py-comment"># CHECK: PIL docs say, only forward seeks are supported - (but seems to work anyway 200808)</tt> </tt>
<a name="L2346"></a><tt class="py-lineno">2346</tt>  <tt class="py-line">    <tt class="py-name">t</tt><tt class="py-op">,</tt><tt class="py-name">cols</tt><tt class="py-op">,</tt><tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nx</tt><tt class="py-op">,</tt><tt class="py-name">isSwapped</tt> <tt class="py-op">=</tt> <tt id="link-743" class="py-name" targets="Function Priithon.useful._getImgMode()=Priithon.useful-module.html#_getImgMode"><a title="Priithon.useful._getImgMode" class="py-name" href="#" onclick="return doclink('link-743', '_getImgMode', 'link-743');">_getImgMode</a></tt><tt class="py-op">(</tt><tt class="py-name">im</tt><tt class="py-op">)</tt> </tt>
<a name="L2347"></a><tt class="py-lineno">2347</tt>  <tt class="py-line"> </tt>
<a name="L2348"></a><tt class="py-lineno">2348</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">i0</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">or</tt> <tt class="py-name">nn</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2349"></a><tt class="py-lineno">2349</tt>  <tt class="py-line">        <tt class="py-comment">#global a</tt> </tt>
<a name="L2350"></a><tt class="py-lineno">2350</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">fromstring</tt><tt class="py-op">(</tt><tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">tostring</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">t</tt><tt class="py-op">)</tt> </tt>
<a name="L2351"></a><tt class="py-lineno">2351</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">cols</tt> <tt class="py-op">==</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2352"></a><tt class="py-lineno">2352</tt>  <tt class="py-line">            <tt class="py-keyword">raise</tt> <tt class="py-name">NotImplementedError</tt><tt class="py-op">,</tt> <tt class="py-string">"TODO: bit array: image size: %s  but array shape: %s"</tt> <tt class="py-op">%</tt> <tt class="py-op">(</tt><tt class="py-name">im</tt><tt class="py-op">.</tt><tt id="link-744" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-744', 'size', 'link-107');">size</a></tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-745" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-745', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2353"></a><tt class="py-lineno">2353</tt>  <tt class="py-line">            <tt class="py-comment"># s = im.size[0]</tt> </tt>
<a name="L2354"></a><tt class="py-lineno">2354</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment"># return a</tt> </tt>
<a name="L2355"></a><tt class="py-lineno">2355</tt>  <tt class="py-line"><tt class="py-comment"></tt>            </tt>
<a name="L2356"></a><tt class="py-lineno">2356</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt class="py-name">cols</tt><tt class="py-op">&gt;</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2357"></a><tt class="py-lineno">2357</tt>  <tt class="py-line">            <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt> <tt class="py-name">ny</tt><tt class="py-op">,</tt> <tt class="py-name">nx</tt><tt class="py-op">,</tt> <tt class="py-name">cols</tt><tt class="py-op">)</tt> </tt>
<a name="L2358"></a><tt class="py-lineno">2358</tt>  <tt class="py-line">            <tt class="py-comment">#print "# multi color image [PIL mode: '%s']: orig shape=%s" % (im.mode,s), \</tt> </tt>
<a name="L2359"></a><tt class="py-lineno">2359</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment">#" --&gt; return transposed! "</tt> </tt>
<a name="L2360"></a><tt class="py-lineno">2360</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-746" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-746', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-name">s</tt> </tt>
<a name="L2361"></a><tt class="py-lineno">2361</tt>  <tt class="py-line">            <tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-747" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-747', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2362"></a><tt class="py-lineno">2362</tt>  <tt class="py-line">            <tt class="py-comment">#special treatment of "grey scale" images saved as RGB or RGBA</tt> </tt>
<a name="L2363"></a><tt class="py-lineno">2363</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-keyword">if</tt> <tt class="py-name">squeezeGreyRGB</tt><tt class="py-op">:</tt> </tt>
<a name="L2364"></a><tt class="py-lineno">2364</tt>  <tt class="py-line">                <tt class="py-keyword">if</tt> <tt class="py-name">cols</tt><tt class="py-op">==</tt><tt class="py-number">3</tt><tt class="py-op">:</tt> </tt>
<a name="L2365"></a><tt class="py-lineno">2365</tt>  <tt class="py-line">                    <tt class="py-keyword">if</tt> <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-748" class="py-name"><a title="Priithon.all" class="py-name" href="#" onclick="return doclink('link-748', 'all', 'link-489');">all</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-keyword">and</tt> \ </tt>
<a name="L2366"></a><tt class="py-lineno">2366</tt>  <tt class="py-line">                       <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-749" class="py-name"><a title="Priithon.all" class="py-name" href="#" onclick="return doclink('link-749', 'all', 'link-489');">all</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2367"></a><tt class="py-lineno">2367</tt>  <tt class="py-line">                        <tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L2368"></a><tt class="py-lineno">2368</tt>  <tt class="py-line">                <tt class="py-keyword">elif</tt> <tt class="py-name">cols</tt><tt class="py-op">==</tt><tt class="py-number">4</tt><tt class="py-op">:</tt> </tt>
<a name="L2369"></a><tt class="py-lineno">2369</tt>  <tt class="py-line">                    <tt class="py-keyword">if</tt> <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-750" class="py-name"><a title="Priithon.all" class="py-name" href="#" onclick="return doclink('link-750', 'all', 'link-489');">all</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-keyword">and</tt> \ </tt>
<a name="L2370"></a><tt class="py-lineno">2370</tt>  <tt class="py-line">                       <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-751" class="py-name"><a title="Priithon.all" class="py-name" href="#" onclick="return doclink('link-751', 'all', 'link-489');">all</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-keyword">and</tt> \ </tt>
<a name="L2371"></a><tt class="py-lineno">2371</tt>  <tt class="py-line">                       <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">3</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-752" class="py-name"><a title="Priithon.all" class="py-name" href="#" onclick="return doclink('link-752', 'all', 'link-489');">all</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-keyword">or</tt> <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">3</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt id="link-753" class="py-name"><a title="Priithon.all" class="py-name" href="#" onclick="return doclink('link-753', 'all', 'link-489');">all</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt>  <tt class="py-comment"># CHECK</tt> </tt>
<a name="L2372"></a><tt class="py-lineno">2372</tt>  <tt class="py-line">                        <tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L2373"></a><tt class="py-lineno">2373</tt>  <tt class="py-line">            <tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">copy</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-comment"># just copy() to get contiguous   </tt> </tt>
<a name="L2374"></a><tt class="py-lineno">2374</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2375"></a><tt class="py-lineno">2375</tt>  <tt class="py-line">           <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-754" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-754', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt> <tt class="py-name">ny</tt><tt class="py-op">,</tt> <tt class="py-name">nx</tt> <tt class="py-op">)</tt> </tt>
<a name="L2376"></a><tt class="py-lineno">2376</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2377"></a><tt class="py-lineno">2377</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">cols</tt> <tt class="py-op">==</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2378"></a><tt class="py-lineno">2378</tt>  <tt class="py-line">            <tt class="py-keyword">raise</tt> <tt class="py-name">NotImplementedError</tt><tt class="py-op">,</tt> <tt class="py-string">"TODO a: bit array: image size: %s"</tt> <tt class="py-op">%</tt> <tt class="py-op">(</tt><tt class="py-name">im</tt><tt class="py-op">.</tt><tt id="link-755" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-755', 'size', 'link-107');">size</a></tt><tt class="py-op">,</tt><tt class="py-op">)</tt> </tt>
<a name="L2379"></a><tt class="py-lineno">2379</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">cols</tt> <tt class="py-op">&gt;</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2380"></a><tt class="py-lineno">2380</tt>  <tt class="py-line">            <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-756" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-756', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">nn</tt><tt class="py-op">,</tt> <tt class="py-name">cols</tt><tt class="py-op">,</tt> <tt class="py-name">ny</tt><tt class="py-op">,</tt> <tt class="py-name">nx</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-757" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-757', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">t</tt><tt class="py-op">)</tt> </tt>
<a name="L2381"></a><tt class="py-lineno">2381</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt id="link-758" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-758', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-759" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-759', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">nn</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2382"></a><tt class="py-lineno">2382</tt>  <tt class="py-line">                <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt class="py-name">i0</tt><tt class="py-op">+</tt><tt class="py-name">iDelta</tt><tt class="py-op">*</tt><tt id="link-760" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-760', 'i', 'link-65');">i</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2383"></a><tt class="py-lineno">2383</tt>  <tt class="py-line">                <tt id="link-761" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-761', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">fromstring</tt><tt class="py-op">(</tt><tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">tostring</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">t</tt><tt class="py-op">)</tt> </tt>
<a name="L2384"></a><tt class="py-lineno">2384</tt>  <tt class="py-line">                <tt id="link-762" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-762', 'x', 'link-481');">x</a></tt><tt class="py-op">.</tt><tt id="link-763" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-763', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">ny</tt><tt class="py-op">,</tt> <tt class="py-name">nx</tt><tt class="py-op">,</tt> <tt class="py-name">cols</tt><tt class="py-op">)</tt> </tt>
<a name="L2385"></a><tt class="py-lineno">2385</tt>  <tt class="py-line">                <tt class="py-name">a</tt><tt class="py-op">[</tt><tt id="link-764" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-764', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt id="link-765" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-765', 'x', 'link-481');">x</a></tt><tt class="py-op">.</tt><tt id="link-766" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-766', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2386"></a><tt class="py-lineno">2386</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2387"></a><tt class="py-lineno">2387</tt>  <tt class="py-line">            <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">empty</tt><tt class="py-op">(</tt><tt id="link-767" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-767', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">nn</tt><tt class="py-op">,</tt> <tt class="py-name">ny</tt><tt class="py-op">,</tt> <tt class="py-name">nx</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-768" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-768', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">t</tt><tt class="py-op">)</tt> </tt>
<a name="L2388"></a><tt class="py-lineno">2388</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt id="link-769" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-769', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-770" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-770', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">nn</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2389"></a><tt class="py-lineno">2389</tt>  <tt class="py-line">                <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt class="py-name">i0</tt><tt class="py-op">+</tt><tt class="py-name">iDelta</tt><tt class="py-op">*</tt><tt id="link-771" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-771', 'i', 'link-65');">i</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2390"></a><tt class="py-lineno">2390</tt>  <tt class="py-line">                <tt id="link-772" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-772', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">fromstring</tt><tt class="py-op">(</tt><tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">tostring</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">t</tt><tt class="py-op">)</tt> </tt>
<a name="L2391"></a><tt class="py-lineno">2391</tt>  <tt class="py-line">                <tt id="link-773" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-773', 'x', 'link-481');">x</a></tt><tt class="py-op">.</tt><tt id="link-774" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-774', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">ny</tt><tt class="py-op">,</tt> <tt class="py-name">nx</tt><tt class="py-op">)</tt> </tt>
<a name="L2392"></a><tt class="py-lineno">2392</tt>  <tt class="py-line">                <tt class="py-name">a</tt><tt class="py-op">[</tt><tt id="link-775" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-775', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt id="link-776" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-776', 'x', 'link-481');">x</a></tt> </tt>
<a name="L2393"></a><tt class="py-lineno">2393</tt>  <tt class="py-line">         </tt>
<a name="L2394"></a><tt class="py-lineno">2394</tt>  <tt class="py-line"> </tt>
<a name="L2395"></a><tt class="py-lineno">2395</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">isSwapped</tt><tt class="py-op">:</tt> </tt>
<a name="L2396"></a><tt class="py-lineno">2396</tt>  <tt class="py-line">        <tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">byteswap</tt><tt class="py-op">(</tt><tt id="link-777" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-777', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2397"></a><tt class="py-lineno">2397</tt>  <tt class="py-line">         </tt>
<a name="L2398"></a><tt class="py-lineno">2398</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">a</tt> </tt>
</div><a name="L2399"></a><tt class="py-lineno">2399</tt>  <tt class="py-line"> </tt>
<a name="L2400"></a><tt class="py-lineno">2400</tt>  <tt class="py-line"> </tt>
<a name="array2image"></a><div id="array2image-def"><a name="L2401"></a><tt class="py-lineno">2401</tt> <a class="py-toggle" href="#" id="array2image-toggle" onclick="return toggle('array2image');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#array2image">array2image</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-string">"rgba"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="array2image-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="array2image-expanded"><a name="L2402"></a><tt class="py-lineno">2402</tt>  <tt class="py-line">    <tt class="py-docstring">"""Convert numpy array to image</tt> </tt>
<a name="L2403"></a><tt class="py-lineno">2403</tt>  <tt class="py-line"><tt class="py-docstring">       a must be of ndim 2 and dtype UInt8,Float32 or UInt16</tt> </tt>
<a name="L2404"></a><tt class="py-lineno">2404</tt>  <tt class="py-line"><tt class="py-docstring">       if a.ndim ==3:</tt> </tt>
<a name="L2405"></a><tt class="py-lineno">2405</tt>  <tt class="py-line"><tt class="py-docstring">          a.dtype must be uint8</tt> </tt>
<a name="L2406"></a><tt class="py-lineno">2406</tt>  <tt class="py-line"><tt class="py-docstring">          the first axis is interpreted as RGB color axis -- for fewer "sections" in a, remaining are assumed to be zero</tt> </tt>
<a name="L2407"></a><tt class="py-lineno">2407</tt>  <tt class="py-line"><tt class="py-docstring">          rgbOrder: order in which axes are mapped to RGB(A) channels</tt> </tt>
<a name="L2408"></a><tt class="py-lineno">2408</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2409"></a><tt class="py-lineno">2409</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">Image</tt> </tt>
<a name="L2410"></a><tt class="py-lineno">2410</tt>  <tt class="py-line"> </tt>
<a name="L2411"></a><tt class="py-lineno">2411</tt>  <tt class="py-line">    <tt class="py-comment"># translate string to "inverse map" aAxis-&gt;rgbaIndex</tt> </tt>
<a name="L2412"></a><tt class="py-lineno">2412</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># e.g. "br" -&gt; [1, 2, 0, 3]</tt> </tt>
<a name="L2413"></a><tt class="py-lineno">2413</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">rgbOrder</tt> <tt class="py-op">=</tt> <tt class="py-name">rgbOrder</tt><tt class="py-op">.</tt><tt class="py-name">lower</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2414"></a><tt class="py-lineno">2414</tt>  <tt class="py-line">    <tt class="py-name">rgbOrder</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">.</tt><tt class="py-name">find</tt><tt class="py-op">(</tt><tt id="link-778" class="py-name" targets="Function Priithon.plt.interface.col()=Priithon.plt.interface-module.html#col"><a title="Priithon.plt.interface.col" class="py-name" href="#" onclick="return doclink('link-778', 'col', 'link-778');">col</a></tt><tt class="py-op">)</tt> <tt class="py-keyword">for</tt> <tt id="link-779" class="py-name"><a title="Priithon.plt.interface.col" class="py-name" href="#" onclick="return doclink('link-779', 'col', 'link-778');">col</a></tt> <tt class="py-keyword">in</tt> <tt class="py-string">"rgba"</tt><tt class="py-op">]</tt> </tt>
<a name="L2415"></a><tt class="py-lineno">2415</tt>  <tt class="py-line">    <tt class="py-name">fillAx</tt><tt class="py-op">=</tt><tt id="link-780" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-780', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> </tt>
<a name="L2416"></a><tt class="py-lineno">2416</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-781" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-781', 'i', 'link-65');">i</a></tt><tt class="py-op">,</tt><tt class="py-name">ax</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2417"></a><tt class="py-lineno">2417</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">ax</tt><tt class="py-op">&lt;</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L2418"></a><tt class="py-lineno">2418</tt>  <tt class="py-line">            <tt class="py-name">rgbOrder</tt><tt class="py-op">[</tt><tt id="link-782" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-782', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">fillAx</tt> </tt>
<a name="L2419"></a><tt class="py-lineno">2419</tt>  <tt class="py-line">            <tt class="py-name">fillAx</tt><tt class="py-op">+=</tt><tt class="py-number">1</tt> </tt>
<a name="L2420"></a><tt class="py-lineno">2420</tt>  <tt class="py-line"> </tt>
<a name="L2421"></a><tt class="py-lineno">2421</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-783" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-783', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">3</tt><tt class="py-op">:</tt> </tt>
<a name="L2422"></a><tt class="py-lineno">2422</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt>   <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-784" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-784', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2423"></a><tt class="py-lineno">2423</tt>  <tt class="py-line">            <tt class="py-keyword">assert</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-785" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-785', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">==</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt> </tt>
<a name="L2424"></a><tt class="py-lineno">2424</tt>  <tt class="py-line">            <tt class="py-name">a22</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-786" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-786', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> <tt class="py-comment"># .copy()</tt> </tt>
<a name="L2425"></a><tt class="py-lineno">2425</tt>  <tt class="py-line">            <tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-787" class="py-name"><a title="Priithon.fftfuncs" class="py-name" href="#" onclick="return doclink('link-787', 'fftfuncs', 'link-452');">fftfuncs</a></tt> <tt class="py-keyword">as</tt> <tt class="py-name">F</tt> </tt>
<a name="L2426"></a><tt class="py-lineno">2426</tt>  <tt class="py-line">            <tt class="py-name">a22</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">a22</tt><tt class="py-op">,</tt><tt class="py-name">F</tt><tt class="py-op">.</tt><tt id="link-788" class="py-name" targets="Function Priithon.fftfuncs.zeroArr()=Priithon.fftfuncs-module.html#zeroArr"><a title="Priithon.fftfuncs.zeroArr" class="py-name" href="#" onclick="return doclink('link-788', 'zeroArr', 'link-788');">zeroArr</a></tt><tt class="py-op">(</tt><tt class="py-name">a22</tt><tt class="py-op">.</tt><tt id="link-789" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-789', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">,</tt><tt class="py-name">a22</tt><tt class="py-op">.</tt><tt id="link-790" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-790', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-op">(</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L2427"></a><tt class="py-lineno">2427</tt>  <tt class="py-line">            <tt class="py-name">a22</tt> <tt class="py-op">=</tt> <tt class="py-name">a22</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">,</tt><tt class="py-op">:</tt><tt class="py-op">,</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">3</tt><tt class="py-op">]</tt><tt class="py-op">]</tt> </tt>
<a name="L2428"></a><tt class="py-lineno">2428</tt>  <tt class="py-line">            <tt class="py-name">ii</tt> <tt class="py-op">=</tt> <tt class="py-name">Image</tt><tt class="py-op">.</tt><tt class="py-name">fromstring</tt><tt class="py-op">(</tt><tt class="py-string">"RGB"</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-791" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-791', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-792" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-792', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">a22</tt><tt class="py-op">.</tt><tt class="py-name">tostring</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2429"></a><tt class="py-lineno">2429</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">ii</tt> </tt>
<a name="L2430"></a><tt class="py-lineno">2430</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt>   <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-793" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-793', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">2</tt><tt class="py-op">:</tt> </tt>
<a name="L2431"></a><tt class="py-lineno">2431</tt>  <tt class="py-line">            <tt class="py-keyword">assert</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-794" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-794', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">==</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt> </tt>
<a name="L2432"></a><tt class="py-lineno">2432</tt>  <tt class="py-line">            <tt class="py-name">a22</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-795" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-795', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> <tt class="py-comment"># .copy()</tt> </tt>
<a name="L2433"></a><tt class="py-lineno">2433</tt>  <tt class="py-line">            <tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-796" class="py-name"><a title="Priithon.fftfuncs" class="py-name" href="#" onclick="return doclink('link-796', 'fftfuncs', 'link-452');">fftfuncs</a></tt> <tt class="py-keyword">as</tt> <tt class="py-name">F</tt> </tt>
<a name="L2434"></a><tt class="py-lineno">2434</tt>  <tt class="py-line">            <tt class="py-name">a22</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">a22</tt><tt class="py-op">,</tt><tt class="py-name">F</tt><tt class="py-op">.</tt><tt id="link-797" class="py-name"><a title="Priithon.fftfuncs.zeroArr" class="py-name" href="#" onclick="return doclink('link-797', 'zeroArr', 'link-788');">zeroArr</a></tt><tt class="py-op">(</tt><tt class="py-name">a22</tt><tt class="py-op">.</tt><tt id="link-798" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-798', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">,</tt><tt class="py-name">a22</tt><tt class="py-op">.</tt><tt id="link-799" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-799', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">+</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L2435"></a><tt class="py-lineno">2435</tt>  <tt class="py-line">            <tt class="py-name">a22</tt> <tt class="py-op">=</tt> <tt class="py-name">a22</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">,</tt><tt class="py-op">:</tt><tt class="py-op">,</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">3</tt><tt class="py-op">]</tt><tt class="py-op">]</tt> </tt>
<a name="L2436"></a><tt class="py-lineno">2436</tt>  <tt class="py-line">            <tt class="py-name">ii</tt> <tt class="py-op">=</tt> <tt class="py-name">Image</tt><tt class="py-op">.</tt><tt class="py-name">fromstring</tt><tt class="py-op">(</tt><tt class="py-string">"RGB"</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-800" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-800', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-801" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-801', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">a22</tt><tt class="py-op">.</tt><tt class="py-name">tostring</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2437"></a><tt class="py-lineno">2437</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">ii</tt> </tt>
<a name="L2438"></a><tt class="py-lineno">2438</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-802" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-802', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">3</tt><tt class="py-op">:</tt> </tt>
<a name="L2439"></a><tt class="py-lineno">2439</tt>  <tt class="py-line">            <tt class="py-keyword">assert</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-803" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-803', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">==</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt> </tt>
<a name="L2440"></a><tt class="py-lineno">2440</tt>  <tt class="py-line">            <tt class="py-name">a22</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-804" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-804', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> <tt class="py-comment"># .copy()</tt> </tt>
<a name="L2441"></a><tt class="py-lineno">2441</tt>  <tt class="py-line">            <tt class="py-name">a22</tt> <tt class="py-op">=</tt> <tt class="py-name">a22</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">,</tt><tt class="py-op">:</tt><tt class="py-op">,</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">3</tt><tt class="py-op">]</tt><tt class="py-op">]</tt> </tt>
<a name="L2442"></a><tt class="py-lineno">2442</tt>  <tt class="py-line">            <tt class="py-name">ii</tt> <tt class="py-op">=</tt> <tt class="py-name">Image</tt><tt class="py-op">.</tt><tt class="py-name">fromstring</tt><tt class="py-op">(</tt><tt class="py-string">"RGB"</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-805" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-805', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-806" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-806', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">a22</tt><tt class="py-op">.</tt><tt class="py-name">tostring</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2443"></a><tt class="py-lineno">2443</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">ii</tt> </tt>
<a name="L2444"></a><tt class="py-lineno">2444</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-807" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-807', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">4</tt><tt class="py-op">:</tt> </tt>
<a name="L2445"></a><tt class="py-lineno">2445</tt>  <tt class="py-line">            <tt class="py-keyword">assert</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-808" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-808', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">==</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt> </tt>
<a name="L2446"></a><tt class="py-lineno">2446</tt>  <tt class="py-line">            <tt class="py-name">a22</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-809" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-809', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> <tt class="py-comment"># .copy()</tt> </tt>
<a name="L2447"></a><tt class="py-lineno">2447</tt>  <tt class="py-line">            <tt class="py-name">a22</tt> <tt class="py-op">=</tt> <tt class="py-name">a22</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">,</tt><tt class="py-op">:</tt><tt class="py-op">,</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">4</tt><tt class="py-op">]</tt><tt class="py-op">]</tt> </tt>
<a name="L2448"></a><tt class="py-lineno">2448</tt>  <tt class="py-line">            <tt class="py-name">ii</tt> <tt class="py-op">=</tt> <tt class="py-name">Image</tt><tt class="py-op">.</tt><tt class="py-name">fromstring</tt><tt class="py-op">(</tt><tt class="py-string">"RGBA"</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-810" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-810', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-811" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-811', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">a22</tt><tt class="py-op">.</tt><tt class="py-name">tostring</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2449"></a><tt class="py-lineno">2449</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">ii</tt> </tt>
<a name="L2450"></a><tt class="py-lineno">2450</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2451"></a><tt class="py-lineno">2451</tt>  <tt class="py-line">            <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"only 2d greyscale or 3d (RGB[A]) supported"</tt> </tt>
<a name="L2452"></a><tt class="py-lineno">2452</tt>  <tt class="py-line">    <tt class="py-comment"># else:  (see return above)</tt> </tt>
<a name="L2453"></a><tt class="py-lineno">2453</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">if</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-812" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-812', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">!=</tt> <tt class="py-number">2</tt><tt class="py-op">:</tt>  </tt>
<a name="L2454"></a><tt class="py-lineno">2454</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"only 2d greyscale or 3d (RGB[A]) supported"</tt> </tt>
<a name="L2455"></a><tt class="py-lineno">2455</tt>  <tt class="py-line"> </tt>
<a name="L2456"></a><tt class="py-lineno">2456</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-813" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-813', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">type</tt> <tt class="py-op">==</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt><tt class="py-op">:</tt> </tt>
<a name="L2457"></a><tt class="py-lineno">2457</tt>  <tt class="py-line">        <tt class="py-name">mode</tt> <tt class="py-op">=</tt> <tt class="py-string">"L"</tt> </tt>
<a name="L2458"></a><tt class="py-lineno">2458</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-814" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-814', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">type</tt> <tt class="py-op">==</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">float32</tt><tt class="py-op">:</tt> </tt>
<a name="L2459"></a><tt class="py-lineno">2459</tt>  <tt class="py-line">        <tt class="py-name">mode</tt> <tt class="py-op">=</tt> <tt class="py-string">"F"</tt> </tt>
<a name="L2460"></a><tt class="py-lineno">2460</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-815" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-815', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">type</tt> <tt class="py-keyword">in</tt> <tt class="py-op">(</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">int16</tt><tt class="py-op">,</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint16</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2461"></a><tt class="py-lineno">2461</tt>  <tt class="py-line">        <tt class="py-name">mode</tt> <tt class="py-op">=</tt> <tt class="py-string">"I;16"</tt> </tt>
<a name="L2462"></a><tt class="py-lineno">2462</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2463"></a><tt class="py-lineno">2463</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"unsupported array datatype"</tt> </tt>
<a name="L2464"></a><tt class="py-lineno">2464</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">Image</tt><tt class="py-op">.</tt><tt class="py-name">fromstring</tt><tt class="py-op">(</tt><tt class="py-name">mode</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-816" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-816', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-817" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-817', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">tostring</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2465"></a><tt class="py-lineno">2465</tt>  <tt class="py-line">    <tt class="py-comment">#20040929 todo: try this:   return Image.frombuffer(mode, (a.shape[1], a.shape[0]), a._data)</tt> </tt>
<a name="L2466"></a><tt class="py-lineno">2466</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L2467"></a><tt class="py-lineno">2467</tt>  <tt class="py-line"> </tt>
<a name="load"></a><div id="load-def"><a name="L2468"></a><tt class="py-lineno">2468</tt> <a class="py-toggle" href="#" id="load-toggle" onclick="return toggle('load');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#load">load</a><tt class="py-op">(</tt><tt class="py-param">fn</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="load-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="load-expanded"><a name="L2469"></a><tt class="py-lineno">2469</tt>  <tt class="py-line">    <tt class="py-docstring">"""open any image file:</tt> </tt>
<a name="L2470"></a><tt class="py-lineno">2470</tt>  <tt class="py-line"><tt class="py-docstring">          '.fits'  - FITS files</tt> </tt>
<a name="L2471"></a><tt class="py-lineno">2471</tt>  <tt class="py-line"><tt class="py-docstring">          '.sif'   - Andor SIF files</tt> </tt>
<a name="L2472"></a><tt class="py-lineno">2472</tt>  <tt class="py-line"><tt class="py-docstring">          '.his'   - Hamamatsu HIS files</tt> </tt>
<a name="L2473"></a><tt class="py-lineno">2473</tt>  <tt class="py-line"><tt class="py-docstring">          '.spe'   - Princeton Instruments CCD image format (SPE) files</tt> </tt>
<a name="L2474"></a><tt class="py-lineno">2474</tt>  <tt class="py-line"><tt class="py-docstring">          '.lsm'   - Zeiss LSM images are read like TIFF; skipping every other slice (thumbnail)</tt> </tt>
<a name="L2475"></a><tt class="py-lineno">2475</tt>  <tt class="py-line"><tt class="py-docstring">          any image file: jpg/bmp/png/... (all PIL formats)</tt> </tt>
<a name="L2476"></a><tt class="py-lineno">2476</tt>  <tt class="py-line"><tt class="py-docstring">               #20060824 CHECK  in this case the returned arr gets attr: arr._originLeftBottom=0</tt> </tt>
<a name="L2477"></a><tt class="py-lineno">2477</tt>  <tt class="py-line"><tt class="py-docstring">          'Mrc' (use Mrc.bindFile)</tt> </tt>
<a name="L2478"></a><tt class="py-lineno">2478</tt>  <tt class="py-line"><tt class="py-docstring">          TODO: "_thmb_&lt;fn.jpg&gt;" files are taken to mean &lt;fn.jpg&gt;</tt> </tt>
<a name="L2479"></a><tt class="py-lineno">2479</tt>  <tt class="py-line"><tt class="py-docstring">       returns image array of type ndarray_meta</tt> </tt>
<a name="L2480"></a><tt class="py-lineno">2480</tt>  <tt class="py-line"><tt class="py-docstring">               None on error</tt> </tt>
<a name="L2481"></a><tt class="py-lineno">2481</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2482"></a><tt class="py-lineno">2482</tt>  <tt class="py-line"><tt class="py-docstring">       if imgFN is None  call Y.FN()  for you</tt> </tt>
<a name="L2483"></a><tt class="py-lineno">2483</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2484"></a><tt class="py-lineno">2484</tt>  <tt class="py-line">    <tt class="py-name">meta</tt><tt class="py-op">=</tt><tt class="py-op">{</tt><tt class="py-string">'filename'</tt><tt class="py-op">:</tt><tt class="py-name">fn</tt><tt class="py-op">}</tt> </tt>
<a name="L2485"></a><tt class="py-lineno">2485</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">fn</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">5</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">lower</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-string">".fits"</tt><tt class="py-op">:</tt> </tt>
<a name="L2486"></a><tt class="py-lineno">2486</tt>  <tt class="py-line">        <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt id="link-818" class="py-name" targets="Function Priithon.useful.loadFits()=Priithon.useful-module.html#loadFits"><a title="Priithon.useful.loadFits" class="py-name" href="#" onclick="return doclink('link-818', 'loadFits', 'link-818');">loadFits</a></tt><tt class="py-op">(</tt> <tt class="py-name">fn</tt> <tt class="py-op">)</tt> </tt>
<a name="L2487"></a><tt class="py-lineno">2487</tt>  <tt class="py-line">        <tt class="py-name">meta</tt><tt class="py-op">[</tt><tt class="py-string">'fileformat'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'fits'</tt> </tt>
<a name="L2488"></a><tt class="py-lineno">2488</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">fn</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">4</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">lower</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-string">".sif"</tt><tt class="py-op">:</tt> </tt>
<a name="L2489"></a><tt class="py-lineno">2489</tt>  <tt class="py-line">        <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">loadSIF</tt><tt class="py-op">(</tt> <tt class="py-name">fn</tt> <tt class="py-op">)</tt> </tt>
<a name="L2490"></a><tt class="py-lineno">2490</tt>  <tt class="py-line">        <tt class="py-name">meta</tt><tt class="py-op">[</tt><tt class="py-string">'fileformat'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'sif'</tt> </tt>
<a name="L2491"></a><tt class="py-lineno">2491</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">fn</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">4</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">lower</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-string">".his"</tt><tt class="py-op">:</tt> </tt>
<a name="L2492"></a><tt class="py-lineno">2492</tt>  <tt class="py-line">        <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt id="link-819" class="py-name" targets="Function Priithon.useful.loadHIS()=Priithon.useful-module.html#loadHIS"><a title="Priithon.useful.loadHIS" class="py-name" href="#" onclick="return doclink('link-819', 'loadHIS', 'link-819');">loadHIS</a></tt><tt class="py-op">(</tt> <tt class="py-name">fn</tt> <tt class="py-op">)</tt> </tt>
<a name="L2493"></a><tt class="py-lineno">2493</tt>  <tt class="py-line">        <tt class="py-name">meta</tt><tt class="py-op">[</tt><tt class="py-string">'fileformat'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'his'</tt> </tt>
<a name="L2494"></a><tt class="py-lineno">2494</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">fn</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">4</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">lower</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-string">".spe"</tt><tt class="py-op">:</tt> </tt>
<a name="L2495"></a><tt class="py-lineno">2495</tt>  <tt class="py-line">        <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt id="link-820" class="py-name" targets="Function Priithon.useful.loadSPE()=Priithon.useful-module.html#loadSPE"><a title="Priithon.useful.loadSPE" class="py-name" href="#" onclick="return doclink('link-820', 'loadSPE', 'link-820');">loadSPE</a></tt><tt class="py-op">(</tt> <tt class="py-name">fn</tt> <tt class="py-op">)</tt> </tt>
<a name="L2496"></a><tt class="py-lineno">2496</tt>  <tt class="py-line">        <tt class="py-name">meta</tt><tt class="py-op">[</tt><tt class="py-string">'fileformat'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'spe'</tt> </tt>
<a name="L2497"></a><tt class="py-lineno">2497</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2498"></a><tt class="py-lineno">2498</tt>  <tt class="py-line">        <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L2499"></a><tt class="py-lineno">2499</tt>  <tt class="py-line">            <tt class="py-comment">#iDelta = 1</tt> </tt>
<a name="L2500"></a><tt class="py-lineno">2500</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-keyword">if</tt> <tt class="py-name">fn</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">4</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">lower</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-string">".lsm"</tt><tt class="py-op">:</tt> </tt>
<a name="L2501"></a><tt class="py-lineno">2501</tt>  <tt class="py-line">                <tt class="py-name">iDelta</tt><tt class="py-op">=</tt><tt class="py-number">2</tt> <tt class="py-comment"># LSM-Zeiss every 2nd img is a thumbnail</tt> </tt>
<a name="L2502"></a><tt class="py-lineno">2502</tt>  <tt class="py-line">                <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt id="link-821" class="py-name" targets="Function Priithon.useful.loadImg()=Priithon.useful-module.html#loadImg"><a title="Priithon.useful.loadImg" class="py-name" href="#" onclick="return doclink('link-821', 'loadImg', 'link-821');">loadImg</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-name">iDelta</tt><tt class="py-op">=</tt><tt class="py-name">iDelta</tt><tt class="py-op">)</tt> </tt>
<a name="L2503"></a><tt class="py-lineno">2503</tt>  <tt class="py-line">                <tt class="py-name">meta</tt><tt class="py-op">[</tt><tt class="py-string">'fileformat'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'lsm'</tt> </tt>
<a name="L2504"></a><tt class="py-lineno">2504</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2505"></a><tt class="py-lineno">2505</tt>  <tt class="py-line">                <tt class="py-comment">#a = loadImg(fn, iDelta=1)</tt> </tt>
<a name="L2506"></a><tt class="py-lineno">2506</tt>  <tt class="py-line"><tt class="py-comment"></tt>                <tt class="py-keyword">import</tt> <tt class="py-name">Image</tt> </tt>
<a name="L2507"></a><tt class="py-lineno">2507</tt>  <tt class="py-line">                <tt class="py-name">im</tt> <tt class="py-op">=</tt> <tt class="py-name">Image</tt><tt class="py-op">.</tt><tt id="link-822" class="py-name" targets="Function Priithon.Mrc.open()=Priithon.Mrc-module.html#open,Function Priithon.plt.dumb_shelve.open()=Priithon.plt.dumb_shelve-module.html#open,Function Priithon.plt.dumbdbm_patched.open()=Priithon.plt.dumbdbm_patched-module.html#open,Method Priithon.py.buffer.Buffer.open()=Priithon.py.buffer.Buffer-class.html#open"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-822', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
<a name="L2508"></a><tt class="py-lineno">2508</tt>  <tt class="py-line">                <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt id="link-823" class="py-name" targets="Function Priithon.useful.image2array()=Priithon.useful-module.html#image2array"><a title="Priithon.useful.image2array" class="py-name" href="#" onclick="return doclink('link-823', 'image2array', 'link-823');">image2array</a></tt><tt class="py-op">(</tt><tt class="py-name">im</tt><tt class="py-op">)</tt><tt class="py-comment">#, i0, iDelta, squeezeGreyRGB)</tt> </tt>
<a name="L2509"></a><tt class="py-lineno">2509</tt>  <tt class="py-line">                <tt class="py-name">meta</tt><tt class="py-op">[</tt><tt class="py-string">'fileformat'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">format</tt> </tt>
<a name="L2510"></a><tt class="py-lineno">2510</tt>  <tt class="py-line"> </tt>
<a name="L2511"></a><tt class="py-lineno">2511</tt>  <tt class="py-line">            <tt class="py-comment">#20060824 CHECK  a._originLeftBottom=0</tt> </tt>
<a name="L2512"></a><tt class="py-lineno">2512</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-keyword">except</tt> <tt class="py-op">(</tt><tt class="py-name">IOError</tt><tt class="py-op">,</tt> <tt class="py-name">SystemError</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2513"></a><tt class="py-lineno">2513</tt>  <tt class="py-line">            <tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-824" class="py-name" targets="Module Priithon.Mrc=Priithon.Mrc-module.html,Class Priithon.Mrc.Mrc=Priithon.Mrc.Mrc-class.html"><a title="Priithon.Mrc
Priithon.Mrc.Mrc" class="py-name" href="#" onclick="return doclink('link-824', 'Mrc', 'link-824');">Mrc</a></tt> </tt>
<a name="L2514"></a><tt class="py-lineno">2514</tt>  <tt class="py-line">            <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt id="link-825" class="py-name"><a title="Priithon.Mrc
Priithon.Mrc.Mrc" class="py-name" href="#" onclick="return doclink('link-825', 'Mrc', 'link-824');">Mrc</a></tt><tt class="py-op">.</tt><tt id="link-826" class="py-name" targets="Function Priithon.Mrc.bindFile()=Priithon.Mrc-module.html#bindFile"><a title="Priithon.Mrc.bindFile" class="py-name" href="#" onclick="return doclink('link-826', 'bindFile', 'link-826');">bindFile</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
<a name="L2515"></a><tt class="py-lineno">2515</tt>  <tt class="py-line">            <tt class="py-name">meta</tt><tt class="py-op">[</tt><tt class="py-string">'fileformat'</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-string">'mrc'</tt> </tt>
<a name="L2516"></a><tt class="py-lineno">2516</tt>  <tt class="py-line"> </tt>
<a name="L2517"></a><tt class="py-lineno">2517</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-op">.</tt><tt id="link-827" class="py-name" targets="Module Priithon.ndarray_meta=Priithon.ndarray_meta-module.html,Class Priithon.ndarray_meta.ndarray_meta=Priithon.ndarray_meta.ndarray_meta-class.html"><a title="Priithon.ndarray_meta
Priithon.ndarray_meta.ndarray_meta" class="py-name" href="#" onclick="return doclink('link-827', 'ndarray_meta', 'link-827');">ndarray_meta</a></tt> <tt class="py-keyword">import</tt> <tt id="link-828" class="py-name"><a title="Priithon.ndarray_meta
Priithon.ndarray_meta.ndarray_meta" class="py-name" href="#" onclick="return doclink('link-828', 'ndarray_meta', 'link-827');">ndarray_meta</a></tt> </tt>
<a name="L2518"></a><tt class="py-lineno">2518</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-829" class="py-name"><a title="Priithon.ndarray_meta
Priithon.ndarray_meta.ndarray_meta" class="py-name" href="#" onclick="return doclink('link-829', 'ndarray_meta', 'link-827');">ndarray_meta</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">meta</tt><tt class="py-op">=</tt><tt class="py-name">meta</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2519"></a><tt class="py-lineno">2519</tt>  <tt class="py-line">     </tt>
<a name="L2520"></a><tt class="py-lineno">2520</tt>  <tt class="py-line"> </tt>
<a name="loadImg"></a><div id="loadImg-def"><a name="L2521"></a><tt class="py-lineno">2521</tt> <a class="py-toggle" href="#" id="loadImg-toggle" onclick="return toggle('loadImg');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#loadImg">loadImg</a><tt class="py-op">(</tt><tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">i0</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-param">iDelta</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-param">squeezeGreyRGB</tt><tt class="py-op">=</tt><tt id="link-830" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-830', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="loadImg-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="loadImg-expanded"><a name="L2522"></a><tt class="py-lineno">2522</tt>  <tt class="py-line">    <tt class="py-docstring">"""Loads image file (tiff,jpg,...) and return it as array</tt> </tt>
<a name="L2523"></a><tt class="py-lineno">2523</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2524"></a><tt class="py-lineno">2524</tt>  <tt class="py-line"><tt class="py-docstring">    if squeezeGreyRGB:</tt> </tt>
<a name="L2525"></a><tt class="py-lineno">2525</tt>  <tt class="py-line"><tt class="py-docstring">       test if an RGB (RGBA) image really just grey - </tt> </tt>
<a name="L2526"></a><tt class="py-lineno">2526</tt>  <tt class="py-line"><tt class="py-docstring">         then return only one channel (others are identical)</tt> </tt>
<a name="L2527"></a><tt class="py-lineno">2527</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2528"></a><tt class="py-lineno">2528</tt>  <tt class="py-line"><tt class="py-docstring">    !!be careful about up-down orientation !!</tt> </tt>
<a name="L2529"></a><tt class="py-lineno">2529</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2530"></a><tt class="py-lineno">2530</tt>  <tt class="py-line"> </tt>
<a name="L2531"></a><tt class="py-lineno">2531</tt>  <tt class="py-line">    <tt class="py-comment">#global im</tt> </tt>
<a name="L2532"></a><tt class="py-lineno">2532</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">import</tt> <tt class="py-name">Image</tt> </tt>
<a name="L2533"></a><tt class="py-lineno">2533</tt>  <tt class="py-line">    <tt class="py-name">im</tt> <tt class="py-op">=</tt> <tt class="py-name">Image</tt><tt class="py-op">.</tt><tt id="link-831" class="py-name"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-831', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
<a name="L2534"></a><tt class="py-lineno">2534</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-832" class="py-name"><a title="Priithon.useful.image2array" class="py-name" href="#" onclick="return doclink('link-832', 'image2array', 'link-823');">image2array</a></tt><tt class="py-op">(</tt><tt class="py-name">im</tt><tt class="py-op">,</tt> <tt class="py-name">i0</tt><tt class="py-op">,</tt> <tt class="py-name">iDelta</tt><tt class="py-op">,</tt> <tt class="py-name">squeezeGreyRGB</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2535"></a><tt class="py-lineno">2535</tt>  <tt class="py-line"> </tt>
<a name="loadImg_iterSec"></a><div id="loadImg_iterSec-def"><a name="L2536"></a><tt class="py-lineno">2536</tt> <a class="py-toggle" href="#" id="loadImg_iterSec-toggle" onclick="return toggle('loadImg_iterSec');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#loadImg_iterSec">loadImg_iterSec</a><tt class="py-op">(</tt><tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">i0</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-param">iDelta</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-param">squeezeGreyRGB</tt><tt class="py-op">=</tt><tt id="link-833" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-833', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="loadImg_iterSec-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="loadImg_iterSec-expanded"><a name="L2537"></a><tt class="py-lineno">2537</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2538"></a><tt class="py-lineno">2538</tt>  <tt class="py-line"><tt class="py-docstring">    iterator:</tt> </tt>
<a name="L2539"></a><tt class="py-lineno">2539</tt>  <tt class="py-line"><tt class="py-docstring">    Loads image file (tiff,jpg,...) and </tt> </tt>
<a name="L2540"></a><tt class="py-lineno">2540</tt>  <tt class="py-line"><tt class="py-docstring">    iterate section-wise yielding a 2d array</tt> </tt>
<a name="L2541"></a><tt class="py-lineno">2541</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2542"></a><tt class="py-lineno">2542</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">Image</tt> </tt>
<a name="L2543"></a><tt class="py-lineno">2543</tt>  <tt class="py-line">    <tt class="py-name">im</tt> <tt class="py-op">=</tt> <tt class="py-name">Image</tt><tt class="py-op">.</tt><tt id="link-834" class="py-name"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-834', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
<a name="L2544"></a><tt class="py-lineno">2544</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-835" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-835', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">xrange</tt><tt class="py-op">(</tt><tt class="py-name">i0</tt><tt class="py-op">,</tt> <tt class="py-number">100000</tt><tt class="py-op">,</tt> <tt class="py-name">iDelta</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2545"></a><tt class="py-lineno">2545</tt>  <tt class="py-line">        <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L2546"></a><tt class="py-lineno">2546</tt>  <tt class="py-line">            <tt class="py-name">im</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt id="link-836" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-836', 'i', 'link-65');">i</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2547"></a><tt class="py-lineno">2547</tt>  <tt class="py-line"> </tt>
<a name="L2548"></a><tt class="py-lineno">2548</tt>  <tt class="py-line">            <tt class="py-keyword">yield</tt> <tt id="link-837" class="py-name"><a title="Priithon.useful.image2array" class="py-name" href="#" onclick="return doclink('link-837', 'image2array', 'link-823');">image2array</a></tt><tt class="py-op">(</tt><tt class="py-name">im</tt><tt class="py-op">,</tt> <tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-name">iDelta</tt><tt class="py-op">,</tt> <tt class="py-name">squeezeGreyRGB</tt><tt class="py-op">)</tt> </tt>
<a name="L2549"></a><tt class="py-lineno">2549</tt>  <tt class="py-line">        <tt class="py-keyword">except</tt> <tt class="py-name">EOFError</tt><tt class="py-op">:</tt> </tt>
<a name="L2550"></a><tt class="py-lineno">2550</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> </tt>
</div><a name="L2551"></a><tt class="py-lineno">2551</tt>  <tt class="py-line"> </tt>
<a name="loadImg_seq"></a><div id="loadImg_seq-def"><a name="L2552"></a><tt class="py-lineno">2552</tt> <a class="py-toggle" href="#" id="loadImg_seq-toggle" onclick="return toggle('loadImg_seq');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#loadImg_seq">loadImg_seq</a><tt class="py-op">(</tt><tt class="py-param">fns</tt><tt class="py-op">,</tt> <tt class="py-param">channels</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">verbose</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> <tt class="py-comment">#### #, i0=0, iDelta=1, squeezeGreyRGB=True):</tt> </tt>
</div><a name="L2553"></a><tt class="py-lineno">2553</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2554"></a><tt class="py-lineno">2554</tt>  <tt class="py-line"><tt class="py-docstring">    Open multiple TIFF-files into a 3-(or 4-)D numpy stack.</tt> </tt>
<a name="L2555"></a><tt class="py-lineno">2555</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2556"></a><tt class="py-lineno">2556</tt>  <tt class="py-line"><tt class="py-docstring">    fns is a list of filenames or a glob-expression</tt> </tt>
<a name="L2557"></a><tt class="py-lineno">2557</tt>  <tt class="py-line"><tt class="py-docstring">    channels:</tt> </tt>
<a name="L2558"></a><tt class="py-lineno">2558</tt>  <tt class="py-line"><tt class="py-docstring">      specify 0 for R</tt> </tt>
<a name="L2559"></a><tt class="py-lineno">2559</tt>  <tt class="py-line"><tt class="py-docstring">              1 for G</tt> </tt>
<a name="L2560"></a><tt class="py-lineno">2560</tt>  <tt class="py-line"><tt class="py-docstring">              2 for B</tt> </tt>
<a name="L2561"></a><tt class="py-lineno">2561</tt>  <tt class="py-line"><tt class="py-docstring">              list of above for mnore than one</tt> </tt>
<a name="L2562"></a><tt class="py-lineno">2562</tt>  <tt class="py-line"><tt class="py-docstring">              None for all</tt> </tt>
<a name="L2563"></a><tt class="py-lineno">2563</tt>  <tt class="py-line"><tt class="py-docstring">      returned shape is (nz, nChannels,ny,nx) if a list/tuple was given</tt> </tt>
<a name="L2564"></a><tt class="py-lineno">2564</tt>  <tt class="py-line"><tt class="py-docstring">      returned shape is (nz, ny,nx) if a scalar was given</tt> </tt>
<a name="L2565"></a><tt class="py-lineno">2565</tt>  <tt class="py-line"><tt class="py-docstring">      if channels is None: one of the above is choosen depending on nChannels==1</tt> </tt>
<a name="L2566"></a><tt class="py-lineno">2566</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2567"></a><tt class="py-lineno">2567</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">glob</tt><tt class="py-op">,</tt> <tt class="py-name">Image</tt> </tt>
<a name="L2568"></a><tt class="py-lineno">2568</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-name">fns</tt><tt class="py-op">)</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2569"></a><tt class="py-lineno">2569</tt>  <tt class="py-line">        <tt class="py-name">fns</tt> <tt class="py-op">=</tt> <tt class="py-name">glob</tt><tt class="py-op">.</tt><tt class="py-name">glob</tt><tt class="py-op">(</tt> <tt class="py-name">fns</tt> <tt class="py-op">)</tt> </tt>
<a name="L2570"></a><tt class="py-lineno">2570</tt>  <tt class="py-line">        <tt class="py-name">fns</tt><tt class="py-op">.</tt><tt class="py-name">sort</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2571"></a><tt class="py-lineno">2571</tt>  <tt class="py-line"> </tt>
<a name="L2572"></a><tt class="py-lineno">2572</tt>  <tt class="py-line">    <tt class="py-name">n</tt> <tt class="py-op">=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">fns</tt><tt class="py-op">)</tt> </tt>
<a name="L2573"></a><tt class="py-lineno">2573</tt>  <tt class="py-line">    <tt class="py-comment">#print n</tt> </tt>
<a name="L2574"></a><tt class="py-lineno">2574</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#print fns</tt> </tt>
<a name="L2575"></a><tt class="py-lineno">2575</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L2576"></a><tt class="py-lineno">2576</tt>  <tt class="py-line">    <tt class="py-name">fn</tt> <tt class="py-op">=</tt> <tt class="py-name">fns</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L2577"></a><tt class="py-lineno">2577</tt>  <tt class="py-line">    <tt class="py-name">im</tt> <tt class="py-op">=</tt> <tt class="py-name">Image</tt><tt class="py-op">.</tt><tt id="link-838" class="py-name"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-838', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
<a name="L2578"></a><tt class="py-lineno">2578</tt>  <tt class="py-line">    <tt id="link-839" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-839', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">,</tt><tt class="py-name">cols</tt><tt class="py-op">,</tt> <tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nx</tt><tt class="py-op">,</tt><tt class="py-name">isSwapped</tt> <tt class="py-op">=</tt> <tt id="link-840" class="py-name"><a title="Priithon.useful._getImgMode" class="py-name" href="#" onclick="return doclink('link-840', '_getImgMode', 'link-743');">_getImgMode</a></tt><tt class="py-op">(</tt><tt class="py-name">im</tt><tt class="py-op">)</tt> </tt>
<a name="L2579"></a><tt class="py-lineno">2579</tt>  <tt class="py-line">    <tt class="py-keyword">del</tt> <tt class="py-name">im</tt> </tt>
<a name="L2580"></a><tt class="py-lineno">2580</tt>  <tt class="py-line"> </tt>
<a name="L2581"></a><tt class="py-lineno">2581</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">cols</tt> <tt class="py-op">&gt;</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2582"></a><tt class="py-lineno">2582</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">hasattr</tt><tt class="py-op">(</tt><tt class="py-name">channels</tt><tt class="py-op">,</tt> <tt class="py-string">"__len__"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2583"></a><tt class="py-lineno">2583</tt>  <tt class="py-line">            <tt class="py-comment"># ensure list-type so that it can be used for fancy indixing</tt> </tt>
<a name="L2584"></a><tt class="py-lineno">2584</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-name">channels</tt> <tt class="py-op">=</tt> <tt class="py-name">list</tt><tt class="py-op">(</tt><tt class="py-name">channels</tt><tt class="py-op">)</tt> </tt>
<a name="L2585"></a><tt class="py-lineno">2585</tt>  <tt class="py-line">            <tt id="link-841" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-841', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">,</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">channels</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nx</tt><tt class="py-op">)</tt> </tt>
<a name="L2586"></a><tt class="py-lineno">2586</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2587"></a><tt class="py-lineno">2587</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">channels</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L2588"></a><tt class="py-lineno">2588</tt>  <tt class="py-line">                <tt class="py-name">channels</tt> <tt class="py-op">=</tt> <tt id="link-842" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-842', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">cols</tt><tt class="py-op">)</tt> </tt>
<a name="L2589"></a><tt class="py-lineno">2589</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2590"></a><tt class="py-lineno">2590</tt>  <tt class="py-line">                <tt class="py-name">channels</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-name">channels</tt><tt class="py-op">]</tt> </tt>
<a name="L2591"></a><tt class="py-lineno">2591</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">channels</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2592"></a><tt class="py-lineno">2592</tt>  <tt class="py-line">                <tt id="link-843" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-843', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">,</tt><tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nx</tt><tt class="py-op">)</tt> </tt>
<a name="L2593"></a><tt class="py-lineno">2593</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2594"></a><tt class="py-lineno">2594</tt>  <tt class="py-line">                <tt id="link-844" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-844', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">,</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">channels</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nx</tt><tt class="py-op">)</tt> </tt>
<a name="L2595"></a><tt class="py-lineno">2595</tt>  <tt class="py-line"> </tt>
<a name="L2596"></a><tt class="py-lineno">2596</tt>  <tt class="py-line"> </tt>
<a name="L2597"></a><tt class="py-lineno">2597</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">channels</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L2598"></a><tt class="py-lineno">2598</tt>  <tt class="py-line">            <tt class="py-name">channels</tt> <tt class="py-op">=</tt> <tt id="link-845" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-845', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">cols</tt><tt class="py-op">)</tt> </tt>
<a name="L2599"></a><tt class="py-lineno">2599</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt class="py-keyword">not</tt> <tt class="py-name">hasattr</tt><tt class="py-op">(</tt><tt class="py-name">channels</tt><tt class="py-op">,</tt> <tt class="py-string">"__len__"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2600"></a><tt class="py-lineno">2600</tt>  <tt class="py-line">            <tt class="py-name">channels</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-name">channels</tt><tt class="py-op">]</tt> </tt>
<a name="L2601"></a><tt class="py-lineno">2601</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2602"></a><tt class="py-lineno">2602</tt>  <tt class="py-line">            <tt class="py-name">channels</tt> <tt class="py-op">=</tt> <tt class="py-name">list</tt><tt class="py-op">(</tt><tt class="py-name">channels</tt><tt class="py-op">)</tt> </tt>
<a name="L2603"></a><tt class="py-lineno">2603</tt>  <tt class="py-line"> </tt>
<a name="L2604"></a><tt class="py-lineno">2604</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2605"></a><tt class="py-lineno">2605</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">channels</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L2606"></a><tt class="py-lineno">2606</tt>  <tt class="py-line">            <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"`channels` can not be specified for one color images"</tt> </tt>
<a name="L2607"></a><tt class="py-lineno">2607</tt>  <tt class="py-line">        <tt id="link-846" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-846', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">,</tt><tt class="py-name">ny</tt><tt class="py-op">,</tt><tt class="py-name">nx</tt><tt class="py-op">)</tt> </tt>
<a name="L2608"></a><tt class="py-lineno">2608</tt>  <tt class="py-line">         </tt>
<a name="L2609"></a><tt class="py-lineno">2609</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">zeros</tt><tt class="py-op">(</tt><tt id="link-847" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-847', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt id="link-848" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-848', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">,</tt> <tt id="link-849" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-849', 'shape', 'link-58');">shape</a></tt><tt class="py-op">=</tt><tt id="link-850" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-850', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2610"></a><tt class="py-lineno">2610</tt>  <tt class="py-line">         </tt>
<a name="L2611"></a><tt class="py-lineno">2611</tt>  <tt class="py-line"> </tt>
<a name="L2612"></a><tt class="py-lineno">2612</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-851" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-851', 'i', 'link-65');">i</a></tt><tt class="py-op">,</tt><tt class="py-name">fn</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">fns</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2613"></a><tt class="py-lineno">2613</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">verbose</tt><tt class="py-op">:</tt> </tt>
<a name="L2614"></a><tt class="py-lineno">2614</tt>  <tt class="py-line">            <tt class="py-keyword">print</tt> <tt id="link-852" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-852', 'i', 'link-65');">i</a></tt><tt class="py-op">,</tt> </tt>
<a name="L2615"></a><tt class="py-lineno">2615</tt>  <tt class="py-line">            <tt class="py-keyword">from</tt> <tt class="py-op">.</tt><tt id="link-853" class="py-name"><a title="Priithon.all" class="py-name" href="#" onclick="return doclink('link-853', 'all', 'link-489');">all</a></tt> <tt class="py-keyword">import</tt> <tt class="py-name">Y</tt> </tt>
<a name="L2616"></a><tt class="py-lineno">2616</tt>  <tt class="py-line">            <tt class="py-name">Y</tt><tt class="py-op">.</tt><tt id="link-854" class="py-name" targets="Function Priithon.usefulX.refresh()=Priithon.usefulX-module.html#refresh,Function Priithon.usefulX_noX.refresh()=Priithon.usefulX_noX-module.html#refresh"><a title="Priithon.usefulX.refresh
Priithon.usefulX_noX.refresh" class="py-name" href="#" onclick="return doclink('link-854', 'refresh', 'link-854');">refresh</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2617"></a><tt class="py-lineno">2617</tt>  <tt class="py-line"> </tt>
<a name="L2618"></a><tt class="py-lineno">2618</tt>  <tt class="py-line">        <tt class="py-name">im</tt> <tt class="py-op">=</tt> <tt class="py-name">Image</tt><tt class="py-op">.</tt><tt id="link-855" class="py-name"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-855', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
<a name="L2619"></a><tt class="py-lineno">2619</tt>  <tt class="py-line">        <tt class="py-comment">##be more robust: </tt> </tt>
<a name="L2620"></a><tt class="py-lineno">2620</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-name">aa</tt> <tt class="py-op">=</tt> <tt id="link-856" class="py-name"><a title="Priithon.useful.loadImg" class="py-name" href="#" onclick="return doclink('link-856', 'loadImg', 'link-821');">loadImg</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-name">squeezeGreyRGB</tt><tt class="py-op">=</tt><tt id="link-857" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-857', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2621"></a><tt class="py-lineno">2621</tt>  <tt class="py-line">        <tt class="py-comment">#         dtype2,cols2, ny2,nx2 = U._getImgMode(im)</tt> </tt>
<a name="L2622"></a><tt class="py-lineno">2622</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#         aa = image2array(im)</tt> </tt>
<a name="L2623"></a><tt class="py-lineno">2623</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-keyword">if</tt> <tt class="py-name">cols</tt> <tt class="py-op">&gt;</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L2624"></a><tt class="py-lineno">2624</tt>  <tt class="py-line">            <tt class="py-comment">#             if cols2 == 1:</tt> </tt>
<a name="L2625"></a><tt class="py-lineno">2625</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment">#                 # what now: we just put data into channels[0] - set others to 0</tt> </tt>
<a name="L2626"></a><tt class="py-lineno">2626</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment">#                 aa = aa[channels]</tt> </tt>
<a name="L2627"></a><tt class="py-lineno">2627</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment">#             else:</tt> </tt>
<a name="L2628"></a><tt class="py-lineno">2628</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-name">aa</tt> <tt class="py-op">=</tt> <tt class="py-name">aa</tt><tt class="py-op">[</tt><tt class="py-name">channels</tt><tt class="py-op">]</tt> </tt>
<a name="L2629"></a><tt class="py-lineno">2629</tt>  <tt class="py-line">        <tt class="py-name">a</tt><tt class="py-op">[</tt><tt id="link-858" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-858', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">aa</tt> </tt>
<a name="L2630"></a><tt class="py-lineno">2630</tt>  <tt class="py-line"> </tt>
<a name="L2631"></a><tt class="py-lineno">2631</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">verbose</tt><tt class="py-op">:</tt> </tt>
<a name="L2632"></a><tt class="py-lineno">2632</tt>  <tt class="py-line">        <tt class="py-keyword">print</tt>  </tt>
<a name="L2633"></a><tt class="py-lineno">2633</tt>  <tt class="py-line">        <tt class="py-name">Y</tt><tt class="py-op">.</tt><tt id="link-859" class="py-name"><a title="Priithon.usefulX.refresh
Priithon.usefulX_noX.refresh" class="py-name" href="#" onclick="return doclink('link-859', 'refresh', 'link-854');">refresh</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2634"></a><tt class="py-lineno">2634</tt>  <tt class="py-line"> </tt>
<a name="L2635"></a><tt class="py-lineno">2635</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">isSwapped</tt><tt class="py-op">:</tt> </tt>
<a name="L2636"></a><tt class="py-lineno">2636</tt>  <tt class="py-line">        <tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">byteswap</tt><tt class="py-op">(</tt><tt id="link-860" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-860', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2637"></a><tt class="py-lineno">2637</tt>  <tt class="py-line"> </tt>
<a name="L2638"></a><tt class="py-lineno">2638</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">a</tt> </tt>
</div><a name="L2639"></a><tt class="py-lineno">2639</tt>  <tt class="py-line"> </tt>
<a name="L2640"></a><tt class="py-lineno">2640</tt>  <tt class="py-line"> </tt>
<a name="saveImg"></a><div id="saveImg-def"><a name="L2641"></a><tt class="py-lineno">2641</tt> <a class="py-toggle" href="#" id="saveImg-toggle" onclick="return toggle('saveImg');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#saveImg">saveImg</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">forceMultipage</tt><tt class="py-op">=</tt><tt id="link-861" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-861', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-string">"rgba"</tt><tt class="py-op">,</tt> <tt class="py-param">format</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="saveImg-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="saveImg-expanded"><a name="L2642"></a><tt class="py-lineno">2642</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2643"></a><tt class="py-lineno">2643</tt>  <tt class="py-line"><tt class="py-docstring">    Saves data array as image file (format from    extension !! .tif,.jpg,...)</tt> </tt>
<a name="L2644"></a><tt class="py-lineno">2644</tt>  <tt class="py-line"><tt class="py-docstring">    tries to use number format of 'arr'</tt> </tt>
<a name="L2645"></a><tt class="py-lineno">2645</tt>  <tt class="py-line"><tt class="py-docstring">    also supports multipage TIFF:</tt> </tt>
<a name="L2646"></a><tt class="py-lineno">2646</tt>  <tt class="py-line"><tt class="py-docstring">        3D arrays: grey (if more than 4 z-secs or `forceMultipage`==True)</tt> </tt>
<a name="L2647"></a><tt class="py-lineno">2647</tt>  <tt class="py-line"><tt class="py-docstring">        4D arrays: color (second dim must be of len 2..4 (RG[B[A]])"</tt> </tt>
<a name="L2648"></a><tt class="py-lineno">2648</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2649"></a><tt class="py-lineno">2649</tt>  <tt class="py-line"><tt class="py-docstring">    for multi-color images:</tt> </tt>
<a name="L2650"></a><tt class="py-lineno">2650</tt>  <tt class="py-line"><tt class="py-docstring">         `rgbOrder`: order in which axes are mapped to RGB(A) channels</tt> </tt>
<a name="L2651"></a><tt class="py-lineno">2651</tt>  <tt class="py-line"><tt class="py-docstring">      </tt> </tt>
<a name="L2652"></a><tt class="py-lineno">2652</tt>  <tt class="py-line"><tt class="py-docstring">    use `format` to spefy format (e.g. "tiff") when fn is really as stream</tt> </tt>
<a name="L2653"></a><tt class="py-lineno">2653</tt>  <tt class="py-line"><tt class="py-docstring">    !!be careful about up-down orientation !!</tt> </tt>
<a name="L2654"></a><tt class="py-lineno">2654</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2655"></a><tt class="py-lineno">2655</tt>  <tt class="py-line"> </tt>
<a name="L2656"></a><tt class="py-lineno">2656</tt>  <tt class="py-line">    <tt id="link-862" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-862', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-863" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-863', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2657"></a><tt class="py-lineno">2657</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-op">(</tt><tt id="link-864" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-864', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-865" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-865', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">3</tt> <tt class="py-keyword">and</tt> <tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-866" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-866', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt><tt class="py-op">&gt;</tt><tt class="py-number">4</tt> <tt class="py-keyword">or</tt> <tt class="py-name">forceMultipage</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> <tt class="py-keyword">or</tt> \ </tt>
<a name="L2658"></a><tt class="py-lineno">2658</tt>  <tt class="py-line">            <tt id="link-867" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-867', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-868" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-868', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">4</tt><tt class="py-op">:</tt> </tt>
<a name="L2659"></a><tt class="py-lineno">2659</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt id="link-869" class="py-name" targets="Function Priithon.useful.saveTiffMultipage()=Priithon.useful-module.html#saveTiffMultipage"><a title="Priithon.useful.saveTiffMultipage" class="py-name" href="#" onclick="return doclink('link-869', 'saveTiffMultipage', 'link-869');">saveTiffMultipage</a></tt><tt class="py-op">(</tt><tt id="link-870" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-870', 'arr', 'link-41');">arr</a></tt><tt class="py-op">,</tt> <tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-name">rescaleTo8bit</tt><tt class="py-op">=</tt><tt id="link-871" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-871', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-name">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt> </tt>
<a name="L2660"></a><tt class="py-lineno">2660</tt>  <tt class="py-line"> </tt>
<a name="L2661"></a><tt class="py-lineno">2661</tt>  <tt class="py-line">    <tt class="py-name">im</tt> <tt class="py-op">=</tt> <tt id="link-872" class="py-name" targets="Function Priithon.useful.array2image()=Priithon.useful-module.html#array2image"><a title="Priithon.useful.array2image" class="py-name" href="#" onclick="return doclink('link-872', 'array2image', 'link-872');">array2image</a></tt><tt class="py-op">(</tt><tt id="link-873" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-873', 'arr', 'link-41');">arr</a></tt><tt class="py-op">,</tt> <tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt> </tt>
<a name="L2662"></a><tt class="py-lineno">2662</tt>  <tt class="py-line">    <tt class="py-name">im</tt><tt class="py-op">.</tt><tt id="link-874" class="py-name" targets="Function Priithon.Mrc.save()=Priithon.Mrc-module.html#save,Method Priithon.mmviewer.GLViewer.save()=Priithon.mmviewer.GLViewer-class.html#save,Function Priithon.plt.interface.save()=Priithon.plt.interface-module.html#save,Method Priithon.plt.wxplt.plot_canvas.save()=Priithon.plt.wxplt.plot_canvas-class.html#save,Method Priithon.py.buffer.Buffer.save()=Priithon.py.buffer.Buffer-class.html#save"><a title="Priithon.Mrc.save
Priithon.mmviewer.GLViewer.save
Priithon.plt.interface.save
Priithon.plt.wxplt.plot_canvas.save
Priithon.py.buffer.Buffer.save" class="py-name" href="#" onclick="return doclink('link-874', 'save', 'link-874');">save</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-name">format</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2663"></a><tt class="py-lineno">2663</tt>  <tt class="py-line"> </tt>
<a name="_saveSeq_getFixedFN"></a><div id="_saveSeq_getFixedFN-def"><a name="L2664"></a><tt class="py-lineno">2664</tt> <a class="py-toggle" href="#" id="_saveSeq_getFixedFN-toggle" onclick="return toggle('_saveSeq_getFixedFN');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_saveSeq_getFixedFN">_saveSeq_getFixedFN</a><tt class="py-op">(</tt><tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">n</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_saveSeq_getFixedFN-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_saveSeq_getFixedFN-expanded"><a name="L2665"></a><tt class="py-lineno">2665</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2666"></a><tt class="py-lineno">2666</tt>  <tt class="py-line"><tt class="py-docstring">    check that fn contains a '%02d'-like part'</tt> </tt>
<a name="L2667"></a><tt class="py-lineno">2667</tt>  <tt class="py-line"><tt class="py-docstring">    autofix if necessary (add enough digits to fit n filenames)</tt> </tt>
<a name="L2668"></a><tt class="py-lineno">2668</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2669"></a><tt class="py-lineno">2669</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L2670"></a><tt class="py-lineno">2670</tt>  <tt class="py-line">        <tt class="py-name">__s</tt> <tt class="py-op">=</tt> <tt class="py-name">fn</tt> <tt class="py-op">%</tt> <tt class="py-number">1</tt> <tt class="py-comment"># test if fn contains '%d'</tt> </tt>
<a name="L2671"></a><tt class="py-lineno">2671</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">TypeError</tt><tt class="py-op">:</tt> </tt>
<a name="L2672"></a><tt class="py-lineno">2672</tt>  <tt class="py-line">        <tt class="py-keyword">import</tt> <tt class="py-name">os</tt> </tt>
<a name="L2673"></a><tt class="py-lineno">2673</tt>  <tt class="py-line">        <tt class="py-name">fnf</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">splitext</tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
<a name="L2674"></a><tt class="py-lineno">2674</tt>  <tt class="py-line">        <tt class="py-name">fns</tt> <tt class="py-op">=</tt> <tt class="py-string">'_%0'</tt> <tt class="py-op">+</tt> <tt class="py-string">'%d'</tt><tt class="py-op">%</tt><tt class="py-op">(</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-875" class="py-name" targets="Variable Priithon.mandel.log10=Priithon.mandel-module.html#log10,Variable Priithon.plt.interface.log10=Priithon.plt.interface-module.html#log10,Variable Priithon.plt.log10=Priithon.plt-module.html#log10,Variable Priithon.plt.plot_objects.log10=Priithon.plt.plot_objects-module.html#log10,Variable Priithon.plt.plot_utility.log10=Priithon.plt.plot_utility-module.html#log10,Variable Priithon.plt.wxplt.log10=Priithon.plt.wxplt-module.html#log10"><a title="Priithon.mandel.log10
Priithon.plt.interface.log10
Priithon.plt.log10
Priithon.plt.plot_objects.log10
Priithon.plt.plot_utility.log10
Priithon.plt.wxplt.log10" class="py-name" href="#" onclick="return doclink('link-875', 'log10', 'link-875');">log10</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt><tt class="py-string">'d'</tt> </tt>
<a name="L2675"></a><tt class="py-lineno">2675</tt>  <tt class="py-line">        <tt class="py-name">fn</tt> <tt class="py-op">=</tt> <tt class="py-name">fnf</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">+</tt> <tt class="py-name">fns</tt> <tt class="py-op">+</tt> <tt class="py-name">fnf</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L2676"></a><tt class="py-lineno">2676</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">fn</tt> </tt>
</div><a name="L2677"></a><tt class="py-lineno">2677</tt>  <tt class="py-line"> </tt>
<a name="saveImg_seq"></a><div id="saveImg_seq-def"><a name="L2678"></a><tt class="py-lineno">2678</tt> <a class="py-toggle" href="#" id="saveImg_seq-toggle" onclick="return toggle('saveImg_seq');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#saveImg_seq">saveImg_seq</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-string">"rgba"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="saveImg_seq-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="saveImg_seq-expanded"><a name="L2679"></a><tt class="py-lineno">2679</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2680"></a><tt class="py-lineno">2680</tt>  <tt class="py-line"><tt class="py-docstring">    Saves 3D data array as 8-bit gray image file sequence (format from  extension !! .tif,.jpg,...)</tt> </tt>
<a name="L2681"></a><tt class="py-lineno">2681</tt>  <tt class="py-line"><tt class="py-docstring">    filename should contain a "template" like %02d - use '%%' otherwise inplace of single '%'</tt> </tt>
<a name="L2682"></a><tt class="py-lineno">2682</tt>  <tt class="py-line"><tt class="py-docstring">    template gets replaced with 00,01,02,03,...</tt> </tt>
<a name="L2683"></a><tt class="py-lineno">2683</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2684"></a><tt class="py-lineno">2684</tt>  <tt class="py-line"><tt class="py-docstring">    for multi-color images:</tt> </tt>
<a name="L2685"></a><tt class="py-lineno">2685</tt>  <tt class="py-line"><tt class="py-docstring">         rgbOrder: order in which axes are mapped to RGB(A) channels</tt> </tt>
<a name="L2686"></a><tt class="py-lineno">2686</tt>  <tt class="py-line"><tt class="py-docstring">      </tt> </tt>
<a name="L2687"></a><tt class="py-lineno">2687</tt>  <tt class="py-line"><tt class="py-docstring">    !!be careful about up-down orientation !!</tt> </tt>
<a name="L2688"></a><tt class="py-lineno">2688</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2689"></a><tt class="py-lineno">2689</tt>  <tt class="py-line">    <tt id="link-876" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-876', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-877" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-877', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2690"></a><tt class="py-lineno">2690</tt>  <tt class="py-line">    <tt class="py-comment">#if arr.ndim != 3:</tt> </tt>
<a name="L2691"></a><tt class="py-lineno">2691</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#    raise "can only save 3d arrays"</tt> </tt>
<a name="L2692"></a><tt class="py-lineno">2692</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-op">(</tt><tt id="link-878" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-878', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-879" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-879', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">3</tt> <tt class="py-keyword">or</tt> <tt class="py-op">(</tt><tt id="link-880" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-880', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-881" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-881', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">4</tt> <tt class="py-keyword">and</tt> <tt id="link-882" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-882', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-883" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-883', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-keyword">in</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-number">3</tt><tt class="py-op">,</tt><tt class="py-number">4</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2693"></a><tt class="py-lineno">2693</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"can only save 3d arrays or 4d with second dim of len 1..4 (RG[B[A]])"</tt> </tt>
<a name="L2694"></a><tt class="py-lineno">2694</tt>  <tt class="py-line"> </tt>
<a name="L2695"></a><tt class="py-lineno">2695</tt>  <tt class="py-line">    <tt class="py-name">fn</tt> <tt class="py-op">=</tt> <tt id="link-884" class="py-name" targets="Function Priithon.useful._saveSeq_getFixedFN()=Priithon.useful-module.html#_saveSeq_getFixedFN"><a title="Priithon.useful._saveSeq_getFixedFN" class="py-name" href="#" onclick="return doclink('link-884', '_saveSeq_getFixedFN', 'link-884');">_saveSeq_getFixedFN</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-885" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-885', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2696"></a><tt class="py-lineno">2696</tt>  <tt class="py-line"> </tt>
<a name="L2697"></a><tt class="py-lineno">2697</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-886" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-886', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-887" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-887', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt id="link-888" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-888', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-889" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-889', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2698"></a><tt class="py-lineno">2698</tt>  <tt class="py-line">        <tt id="link-890" class="py-name" targets="Function Priithon.useful.saveImg()=Priithon.useful-module.html#saveImg"><a title="Priithon.useful.saveImg" class="py-name" href="#" onclick="return doclink('link-890', 'saveImg', 'link-890');">saveImg</a></tt><tt class="py-op">(</tt><tt id="link-891" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-891', 'arr', 'link-41');">arr</a></tt><tt class="py-op">[</tt><tt id="link-892" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-892', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">fn</tt> <tt class="py-op">%</tt> <tt id="link-893" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-893', 'i', 'link-65');">i</a></tt><tt class="py-op">,</tt> <tt class="py-name">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2699"></a><tt class="py-lineno">2699</tt>  <tt class="py-line"> </tt>
<a name="saveImg8"></a><div id="saveImg8-def"><a name="L2700"></a><tt class="py-lineno">2700</tt> <a class="py-toggle" href="#" id="saveImg8-toggle" onclick="return toggle('saveImg8');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#saveImg8">saveImg8</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">forceMultipage</tt><tt class="py-op">=</tt><tt id="link-894" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-894', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-string">"rgba"</tt><tt class="py-op">,</tt> <tt class="py-param">format</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="saveImg8-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="saveImg8-expanded"><a name="L2701"></a><tt class="py-lineno">2701</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2702"></a><tt class="py-lineno">2702</tt>  <tt class="py-line"><tt class="py-docstring">    Saves data array as 8-bit gray image file (format from  extension !! .tif,.jpg,...)</tt> </tt>
<a name="L2703"></a><tt class="py-lineno">2703</tt>  <tt class="py-line"><tt class="py-docstring">    be careful about up-down orientation !!</tt> </tt>
<a name="L2704"></a><tt class="py-lineno">2704</tt>  <tt class="py-line"><tt class="py-docstring">    if arr.dtype is not N.uint8  arr gets rescaled to 0..255</tt> </tt>
<a name="L2705"></a><tt class="py-lineno">2705</tt>  <tt class="py-line"><tt class="py-docstring">    also supports multipage TIFF:</tt> </tt>
<a name="L2706"></a><tt class="py-lineno">2706</tt>  <tt class="py-line"><tt class="py-docstring">        arr gets rescaled to 0..255 to match min..max of entire stack</tt> </tt>
<a name="L2707"></a><tt class="py-lineno">2707</tt>  <tt class="py-line"><tt class="py-docstring">        3D arrays: grey (if more than 4 z-secs or forceMultipage==True)</tt> </tt>
<a name="L2708"></a><tt class="py-lineno">2708</tt>  <tt class="py-line"><tt class="py-docstring">        4D arrays: color (second dim must be of len 2..4 (RG[B[A]])"</tt> </tt>
<a name="L2709"></a><tt class="py-lineno">2709</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2710"></a><tt class="py-lineno">2710</tt>  <tt class="py-line"><tt class="py-docstring">    for multi-color images:</tt> </tt>
<a name="L2711"></a><tt class="py-lineno">2711</tt>  <tt class="py-line"><tt class="py-docstring">         rgbOrder: order in which axes are mapped to RGB(A) channels</tt> </tt>
<a name="L2712"></a><tt class="py-lineno">2712</tt>  <tt class="py-line"><tt class="py-docstring">      </tt> </tt>
<a name="L2713"></a><tt class="py-lineno">2713</tt>  <tt class="py-line"><tt class="py-docstring">    use `format` to specify format (e.g. "tiff") when fn is really as stream</tt> </tt>
<a name="L2714"></a><tt class="py-lineno">2714</tt>  <tt class="py-line"><tt class="py-docstring">    !!be careful about up-down orientation !!</tt> </tt>
<a name="L2715"></a><tt class="py-lineno">2715</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2716"></a><tt class="py-lineno">2716</tt>  <tt class="py-line"> </tt>
<a name="L2717"></a><tt class="py-lineno">2717</tt>  <tt class="py-line">    <tt id="link-895" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-895', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-896" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-896', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2718"></a><tt class="py-lineno">2718</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-op">(</tt><tt id="link-897" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-897', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-898" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-898', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">3</tt> <tt class="py-keyword">and</tt> <tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-899" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-899', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt><tt class="py-op">&gt;</tt><tt class="py-number">4</tt> <tt class="py-keyword">or</tt> <tt class="py-name">forceMultipage</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> <tt class="py-keyword">or</tt> \ </tt>
<a name="L2719"></a><tt class="py-lineno">2719</tt>  <tt class="py-line">            <tt id="link-900" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-900', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-901" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-901', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">4</tt><tt class="py-op">:</tt> </tt>
<a name="L2720"></a><tt class="py-lineno">2720</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt id="link-902" class="py-name"><a title="Priithon.useful.saveTiffMultipage" class="py-name" href="#" onclick="return doclink('link-902', 'saveTiffMultipage', 'link-869');">saveTiffMultipage</a></tt><tt class="py-op">(</tt><tt id="link-903" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-903', 'arr', 'link-41');">arr</a></tt><tt class="py-op">,</tt> <tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-name">rescaleTo8bit</tt><tt class="py-op">=</tt><tt id="link-904" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-904', 'True', 'link-38');">True</a></tt><tt class="py-op">,</tt> <tt class="py-name">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt> </tt>
<a name="L2721"></a><tt class="py-lineno">2721</tt>  <tt class="py-line"> </tt>
<a name="L2722"></a><tt class="py-lineno">2722</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-op">(</tt><tt id="link-905" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-905', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-906" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-906', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">2</tt> <tt class="py-keyword">or</tt> <tt class="py-op">(</tt><tt id="link-907" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-907', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-908" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-908', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">3</tt> <tt class="py-keyword">and</tt> <tt id="link-909" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-909', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-910" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-910', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-keyword">in</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-number">3</tt><tt class="py-op">,</tt><tt class="py-number">4</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2723"></a><tt class="py-lineno">2723</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"can only save 2d greyscale or 3d (RGB[A]) arrays"</tt> </tt>
<a name="L2724"></a><tt class="py-lineno">2724</tt>  <tt class="py-line">     </tt>
<a name="L2725"></a><tt class="py-lineno">2725</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-911" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-911', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-912" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-912', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">type</tt> <tt class="py-op">!=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt><tt class="py-op">:</tt> </tt>
<a name="L2726"></a><tt class="py-lineno">2726</tt>  <tt class="py-line">        <tt class="py-name">mi</tt><tt class="py-op">,</tt><tt class="py-name">ma</tt> <tt class="py-op">=</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt id="link-913" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-913', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-914" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-914', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt id="link-915" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-915', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-916" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-916', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2727"></a><tt class="py-lineno">2727</tt>  <tt class="py-line">        <tt class="py-name">ra</tt> <tt class="py-op">=</tt> <tt class="py-name">ma</tt><tt class="py-op">-</tt><tt class="py-name">mi</tt> </tt>
<a name="L2728"></a><tt class="py-lineno">2728</tt>  <tt class="py-line">        <tt id="link-917" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-917', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">(</tt><tt id="link-918" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-918', 'arr', 'link-41');">arr</a></tt><tt class="py-op">-</tt><tt class="py-name">mi</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-number">255.</tt><tt class="py-op">/</tt><tt class="py-name">ra</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">astype</tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt><tt class="py-op">)</tt> </tt>
<a name="L2729"></a><tt class="py-lineno">2729</tt>  <tt class="py-line"> </tt>
<a name="L2730"></a><tt class="py-lineno">2730</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">Image</tt> </tt>
<a name="L2731"></a><tt class="py-lineno">2731</tt>  <tt class="py-line">    <tt class="py-name">im8</tt> <tt class="py-op">=</tt> <tt id="link-919" class="py-name"><a title="Priithon.useful.array2image" class="py-name" href="#" onclick="return doclink('link-919', 'array2image', 'link-872');">array2image</a></tt><tt class="py-op">(</tt><tt id="link-920" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-920', 'arr', 'link-41');">arr</a></tt><tt class="py-op">,</tt> <tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt> </tt>
<a name="L2732"></a><tt class="py-lineno">2732</tt>  <tt class="py-line">    <tt class="py-comment">#20050711 im8= im.convert("L")</tt> </tt>
<a name="L2733"></a><tt class="py-lineno">2733</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">im8</tt><tt class="py-op">.</tt><tt id="link-921" class="py-name"><a title="Priithon.Mrc.save
Priithon.mmviewer.GLViewer.save
Priithon.plt.interface.save
Priithon.plt.wxplt.plot_canvas.save
Priithon.py.buffer.Buffer.save" class="py-name" href="#" onclick="return doclink('link-921', 'save', 'link-874');">save</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt> <tt class="py-op">,</tt><tt class="py-name">format</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2734"></a><tt class="py-lineno">2734</tt>  <tt class="py-line"> </tt>
<a name="saveImg8_seq"></a><div id="saveImg8_seq-def"><a name="L2735"></a><tt class="py-lineno">2735</tt> <a class="py-toggle" href="#" id="saveImg8_seq-toggle" onclick="return toggle('saveImg8_seq');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#saveImg8_seq">saveImg8_seq</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-string">"rgba"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="saveImg8_seq-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="saveImg8_seq-expanded"><a name="L2736"></a><tt class="py-lineno">2736</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2737"></a><tt class="py-lineno">2737</tt>  <tt class="py-line"><tt class="py-docstring">    Saves 3D data array as 8-bit gray image file sequence (format from  extension !! .tif,.jpg,...)</tt> </tt>
<a name="L2738"></a><tt class="py-lineno">2738</tt>  <tt class="py-line"><tt class="py-docstring">    filename must contain a "template" like %02d - use '%%' otherwise inplace of single '%'</tt> </tt>
<a name="L2739"></a><tt class="py-lineno">2739</tt>  <tt class="py-line"><tt class="py-docstring">    template gets replaced with 00,01,02,03,...</tt> </tt>
<a name="L2740"></a><tt class="py-lineno">2740</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2741"></a><tt class="py-lineno">2741</tt>  <tt class="py-line"><tt class="py-docstring">    arr gets rescaled to 0..255 to match min..max of entire stack</tt> </tt>
<a name="L2742"></a><tt class="py-lineno">2742</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2743"></a><tt class="py-lineno">2743</tt>  <tt class="py-line"><tt class="py-docstring">    for multi-color images:</tt> </tt>
<a name="L2744"></a><tt class="py-lineno">2744</tt>  <tt class="py-line"><tt class="py-docstring">         rgbOrder: order in which axes are mapped to RGB(A) channels</tt> </tt>
<a name="L2745"></a><tt class="py-lineno">2745</tt>  <tt class="py-line"><tt class="py-docstring">      </tt> </tt>
<a name="L2746"></a><tt class="py-lineno">2746</tt>  <tt class="py-line"><tt class="py-docstring">    !!be careful about up-down orientation !!</tt> </tt>
<a name="L2747"></a><tt class="py-lineno">2747</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2748"></a><tt class="py-lineno">2748</tt>  <tt class="py-line">    <tt id="link-922" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-922', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-923" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-923', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2749"></a><tt class="py-lineno">2749</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-924" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-924', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-925" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-925', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">!=</tt> <tt class="py-number">3</tt><tt class="py-op">:</tt> </tt>
<a name="L2750"></a><tt class="py-lineno">2750</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"can only save 3d arrays"</tt> </tt>
<a name="L2751"></a><tt class="py-lineno">2751</tt>  <tt class="py-line"> </tt>
<a name="L2752"></a><tt class="py-lineno">2752</tt>  <tt class="py-line">    <tt class="py-name">fn</tt> <tt class="py-op">=</tt> <tt id="link-926" class="py-name"><a title="Priithon.useful._saveSeq_getFixedFN" class="py-name" href="#" onclick="return doclink('link-926', '_saveSeq_getFixedFN', 'link-884');">_saveSeq_getFixedFN</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-927" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-927', 'arr', 'link-41');">arr</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2753"></a><tt class="py-lineno">2753</tt>  <tt class="py-line"> </tt>
<a name="L2754"></a><tt class="py-lineno">2754</tt>  <tt class="py-line">    <tt class="py-name">mi</tt><tt class="py-op">,</tt><tt class="py-name">ma</tt> <tt class="py-op">=</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt id="link-928" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-928', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-929" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-929', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt id="link-930" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-930', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-931" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-931', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2755"></a><tt class="py-lineno">2755</tt>  <tt class="py-line">    <tt class="py-name">ra</tt> <tt class="py-op">=</tt> <tt class="py-name">ma</tt><tt class="py-op">-</tt><tt class="py-name">mi</tt> </tt>
<a name="L2756"></a><tt class="py-lineno">2756</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-932" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-932', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-933" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-933', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt id="link-934" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-934', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-935" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-935', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2757"></a><tt class="py-lineno">2757</tt>  <tt class="py-line">        <tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt id="link-936" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-936', 'arr', 'link-41');">arr</a></tt><tt class="py-op">[</tt><tt id="link-937" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-937', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">-</tt><tt class="py-name">mi</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-number">255.</tt><tt class="py-op">/</tt><tt class="py-name">ra</tt> </tt>
<a name="L2758"></a><tt class="py-lineno">2758</tt>  <tt class="py-line">        <tt id="link-938" class="py-name"><a title="Priithon.useful.saveImg" class="py-name" href="#" onclick="return doclink('link-938', 'saveImg', 'link-890');">saveImg</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">astype</tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">fn</tt> <tt class="py-op">%</tt> <tt id="link-939" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-939', 'i', 'link-65');">i</a></tt><tt class="py-op">,</tt> <tt class="py-name">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2759"></a><tt class="py-lineno">2759</tt>  <tt class="py-line"> </tt>
<a name="loadFits"></a><div id="loadFits-def"><a name="L2760"></a><tt class="py-lineno">2760</tt> <a class="py-toggle" href="#" id="loadFits-toggle" onclick="return toggle('loadFits');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#loadFits">loadFits</a><tt class="py-op">(</tt><tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">slot</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="loadFits-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="loadFits-expanded"><a name="L2761"></a><tt class="py-lineno">2761</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2762"></a><tt class="py-lineno">2762</tt>  <tt class="py-line"><tt class="py-docstring">    Loads FITC file and return it as array</tt> </tt>
<a name="L2763"></a><tt class="py-lineno">2763</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2764"></a><tt class="py-lineno">2764</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">pyfits</tt> </tt>
<a name="L2765"></a><tt class="py-lineno">2765</tt>  <tt class="py-line">    <tt class="py-name">ff</tt> <tt class="py-op">=</tt> <tt class="py-name">pyfits</tt><tt class="py-op">.</tt><tt id="link-940" class="py-name"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-940', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
<a name="L2766"></a><tt class="py-lineno">2766</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">ff</tt><tt class="py-op">[</tt> <tt class="py-name">slot</tt> <tt class="py-op">]</tt><tt class="py-op">.</tt><tt id="link-941" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-941', 'data', 'link-464');">data</a></tt> </tt>
</div><a name="L2767"></a><tt class="py-lineno">2767</tt>  <tt class="py-line"> </tt>
<a name="loadHIS"></a><div id="loadHIS-def"><a name="L2768"></a><tt class="py-lineno">2768</tt> <a class="py-toggle" href="#" id="loadHIS-toggle" onclick="return toggle('loadHIS');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#loadHIS">loadHIS</a><tt class="py-op">(</tt><tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">secStart</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-param">secEnd</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">stride</tt><tt class="py-op">=</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-param">mode</tt><tt class="py-op">=</tt><tt class="py-string">'r'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="loadHIS-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="loadHIS-expanded"><a name="L2769"></a><tt class="py-lineno">2769</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2770"></a><tt class="py-lineno">2770</tt>  <tt class="py-line"><tt class="py-docstring">    load Hamamatsu Image Sequence file format</tt> </tt>
<a name="L2771"></a><tt class="py-lineno">2771</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2772"></a><tt class="py-lineno">2772</tt>  <tt class="py-line"><tt class="py-docstring">    if secStart=0, and secEnd=None, and stride=1:</tt> </tt>
<a name="L2773"></a><tt class="py-lineno">2773</tt>  <tt class="py-line"><tt class="py-docstring">       use memmap to map entire file:</tt> </tt>
<a name="L2774"></a><tt class="py-lineno">2774</tt>  <tt class="py-line"><tt class="py-docstring">       there are two cases:</tt> </tt>
<a name="L2775"></a><tt class="py-lineno">2775</tt>  <tt class="py-line"><tt class="py-docstring">          1) multiple sections have comments:</tt> </tt>
<a name="L2776"></a><tt class="py-lineno">2776</tt>  <tt class="py-line"><tt class="py-docstring">             -&gt; return mockNDarray of (memmaped) sections</tt> </tt>
<a name="L2777"></a><tt class="py-lineno">2777</tt>  <tt class="py-line"><tt class="py-docstring">          2) only the first section (may) have comments</tt> </tt>
<a name="L2778"></a><tt class="py-lineno">2778</tt>  <tt class="py-line"><tt class="py-docstring">             -&gt; map the whole file into one recarray</tt> </tt>
<a name="L2779"></a><tt class="py-lineno">2779</tt>  <tt class="py-line"><tt class="py-docstring">             NOTE(!): a.HIS.hdr[0] will be corrupt !! use a.HIS.hdr0 instead !!</tt> </tt>
<a name="L2780"></a><tt class="py-lineno">2780</tt>  <tt class="py-line"><tt class="py-docstring">    otherwise OR if mode is None: </tt> </tt>
<a name="L2781"></a><tt class="py-lineno">2781</tt>  <tt class="py-line"><tt class="py-docstring">       load given range of sections into memory </tt> </tt>
<a name="L2782"></a><tt class="py-lineno">2782</tt>  <tt class="py-line"><tt class="py-docstring">       (using N.fromfile) and</tt> </tt>
<a name="L2783"></a><tt class="py-lineno">2783</tt>  <tt class="py-line"><tt class="py-docstring">       return mockNDarray of (in memory) sections</tt> </tt>
<a name="L2784"></a><tt class="py-lineno">2784</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2785"></a><tt class="py-lineno">2785</tt>  <tt class="py-line"><tt class="py-docstring">    if secEnd is None: load section until end of file</tt> </tt>
<a name="L2786"></a><tt class="py-lineno">2786</tt>  <tt class="py-line"><tt class="py-docstring">    mode: only used for case 1; 'r' open file readonly, 'r+' read-and-write</tt> </tt>
<a name="L2787"></a><tt class="py-lineno">2787</tt>  <tt class="py-line"><tt class="py-docstring">    ref.: readerHIS.py</tt> </tt>
<a name="L2788"></a><tt class="py-lineno">2788</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2789"></a><tt class="py-lineno">2789</tt>  <tt class="py-line">    <tt class="py-comment">#from readerHIS import openHIS as loadHIS </tt> </tt>
<a name="L2790"></a><tt class="py-lineno">2790</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">if</tt> <tt class="py-name">secStart</tt><tt class="py-op">==</tt><tt class="py-number">0</tt> <tt class="py-keyword">and</tt> <tt class="py-name">secEnd</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">and</tt> <tt class="py-name">stride</tt><tt class="py-op">==</tt><tt class="py-number">1</tt> <tt class="py-keyword">and</tt> <tt class="py-name">mode</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L2791"></a><tt class="py-lineno">2791</tt>  <tt class="py-line">        <tt class="py-keyword">from</tt> <tt class="py-op">.</tt><tt id="link-942" class="py-name" targets="Module Priithon.readerHIS=Priithon.readerHIS-module.html"><a title="Priithon.readerHIS" class="py-name" href="#" onclick="return doclink('link-942', 'readerHIS', 'link-942');">readerHIS</a></tt> <tt class="py-keyword">import</tt> <tt id="link-943" class="py-name" targets="Function Priithon.readerHIS.openHIS()=Priithon.readerHIS-module.html#openHIS"><a title="Priithon.readerHIS.openHIS" class="py-name" href="#" onclick="return doclink('link-943', 'openHIS', 'link-943');">openHIS</a></tt> <tt class="py-comment"># uses memmap</tt> </tt>
<a name="L2792"></a><tt class="py-lineno">2792</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt id="link-944" class="py-name"><a title="Priithon.readerHIS.openHIS" class="py-name" href="#" onclick="return doclink('link-944', 'openHIS', 'link-943');">openHIS</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-name">mode</tt><tt class="py-op">)</tt> </tt>
<a name="L2793"></a><tt class="py-lineno">2793</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2794"></a><tt class="py-lineno">2794</tt>  <tt class="py-line">        <tt class="py-keyword">from</tt> <tt class="py-op">.</tt><tt id="link-945" class="py-name"><a title="Priithon.readerHIS" class="py-name" href="#" onclick="return doclink('link-945', 'readerHIS', 'link-942');">readerHIS</a></tt> <tt class="py-keyword">import</tt> <tt id="link-946" class="py-name" targets="Function Priithon.readerHIS.loadHISsects()=Priithon.readerHIS-module.html#loadHISsects"><a title="Priithon.readerHIS.loadHISsects" class="py-name" href="#" onclick="return doclink('link-946', 'loadHISsects', 'link-946');">loadHISsects</a></tt> <tt class="py-comment"># uses fromfile</tt> </tt>
<a name="L2795"></a><tt class="py-lineno">2795</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt id="link-947" class="py-name"><a title="Priithon.readerHIS.loadHISsects" class="py-name" href="#" onclick="return doclink('link-947', 'loadHISsects', 'link-946');">loadHISsects</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-name">secStart</tt><tt class="py-op">,</tt> <tt class="py-name">secEnd</tt><tt class="py-op">,</tt> <tt class="py-name">stride</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2796"></a><tt class="py-lineno">2796</tt>  <tt class="py-line"> </tt>
<a name="loadSPE"></a><div id="loadSPE-def"><a name="L2797"></a><tt class="py-lineno">2797</tt> <a class="py-toggle" href="#" id="loadSPE-toggle" onclick="return toggle('loadSPE');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#loadSPE">loadSPE</a><tt class="py-op">(</tt><tt class="py-param">fn</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="loadSPE-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="loadSPE-expanded"><a name="L2798"></a><tt class="py-lineno">2798</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2799"></a><tt class="py-lineno">2799</tt>  <tt class="py-line"><tt class="py-docstring">    load Princeton Instruments CCD image format (.SPE)</tt> </tt>
<a name="L2800"></a><tt class="py-lineno">2800</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2801"></a><tt class="py-lineno">2801</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-948" class="py-name" targets="Module Priithon.readerSPE=Priithon.readerSPE-module.html"><a title="Priithon.readerSPE" class="py-name" href="#" onclick="return doclink('link-948', 'readerSPE', 'link-948');">readerSPE</a></tt> </tt>
<a name="L2802"></a><tt class="py-lineno">2802</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-949" class="py-name"><a title="Priithon.readerSPE" class="py-name" href="#" onclick="return doclink('link-949', 'readerSPE', 'link-948');">readerSPE</a></tt><tt class="py-op">.</tt><tt id="link-950" class="py-name" targets="Function Priithon.Mrc.load()=Priithon.Mrc-module.html#load,Method Priithon.mmviewer.GLViewer.load()=Priithon.mmviewer.GLViewer-class.html#load,Function Priithon.readerSPE.load()=Priithon.readerSPE-module.html#load,Function Priithon.useful.load()=Priithon.useful-module.html#load,Function Priithon.usefulX.load()=Priithon.usefulX-module.html#load"><a title="Priithon.Mrc.load
Priithon.mmviewer.GLViewer.load
Priithon.readerSPE.load
Priithon.useful.load
Priithon.usefulX.load" class="py-name" href="#" onclick="return doclink('link-950', 'load', 'link-950');">load</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2803"></a><tt class="py-lineno">2803</tt>  <tt class="py-line"> </tt>
<a name="saveFits"></a><div id="saveFits-def"><a name="L2804"></a><tt class="py-lineno">2804</tt> <a class="py-toggle" href="#" id="saveFits-toggle" onclick="return toggle('saveFits');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#saveFits">saveFits</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">overwrite</tt><tt class="py-op">=</tt><tt id="link-951" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-951', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="saveFits-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="saveFits-expanded"><a name="L2805"></a><tt class="py-lineno">2805</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">pyfits</tt> </tt>
<a name="L2806"></a><tt class="py-lineno">2806</tt>  <tt class="py-line"> </tt>
<a name="L2807"></a><tt class="py-lineno">2807</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">overwrite</tt><tt class="py-op">:</tt> </tt>
<a name="L2808"></a><tt class="py-lineno">2808</tt>  <tt class="py-line">        <tt class="py-keyword">import</tt> <tt class="py-name">os</tt> </tt>
<a name="L2809"></a><tt class="py-lineno">2809</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">exists</tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2810"></a><tt class="py-lineno">2810</tt>  <tt class="py-line">            <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">remove</tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
<a name="L2811"></a><tt class="py-lineno">2811</tt>  <tt class="py-line"> </tt>
<a name="L2812"></a><tt class="py-lineno">2812</tt>  <tt class="py-line">    <tt class="py-name">fits_file</tt> <tt class="py-op">=</tt> <tt class="py-name">pyfits</tt><tt class="py-op">.</tt><tt class="py-name">HDUList</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2813"></a><tt class="py-lineno">2813</tt>  <tt class="py-line">    <tt class="py-name">datahdu</tt> <tt class="py-op">=</tt> <tt class="py-name">pyfits</tt><tt class="py-op">.</tt><tt class="py-name">PrimaryHDU</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2814"></a><tt class="py-lineno">2814</tt>  <tt class="py-line">    <tt class="py-name">shapehdu</tt> <tt class="py-op">=</tt> <tt class="py-name">pyfits</tt><tt class="py-op">.</tt><tt class="py-name">ImageHDU</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2815"></a><tt class="py-lineno">2815</tt>  <tt class="py-line">    <tt class="py-name">datahdu</tt><tt class="py-op">.</tt><tt id="link-952" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-952', 'data', 'link-464');">data</a></tt> <tt class="py-op">=</tt> <tt id="link-953" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-953', 'arr', 'link-41');">arr</a></tt> </tt>
<a name="L2816"></a><tt class="py-lineno">2816</tt>  <tt class="py-line">    <tt class="py-name">shapehdu</tt><tt class="py-op">.</tt><tt id="link-954" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-954', 'data', 'link-464');">data</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt id="link-955" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-955', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-956" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-956', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> </tt>
<a name="L2817"></a><tt class="py-lineno">2817</tt>  <tt class="py-line">    <tt class="py-name">fits_file</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">datahdu</tt><tt class="py-op">)</tt> </tt>
<a name="L2818"></a><tt class="py-lineno">2818</tt>  <tt class="py-line">    <tt class="py-name">fits_file</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">shapehdu</tt><tt class="py-op">)</tt> </tt>
<a name="L2819"></a><tt class="py-lineno">2819</tt>  <tt class="py-line">    <tt class="py-name">fits_file</tt><tt class="py-op">.</tt><tt class="py-name">writeto</tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2820"></a><tt class="py-lineno">2820</tt>  <tt class="py-line"> </tt>
<a name="saveTiffMultipage"></a><div id="saveTiffMultipage-def"><a name="L2821"></a><tt class="py-lineno">2821</tt> <a class="py-toggle" href="#" id="saveTiffMultipage-toggle" onclick="return toggle('saveTiffMultipage');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#saveTiffMultipage">saveTiffMultipage</a><tt class="py-op">(</tt><tt class="py-param">arr</tt><tt class="py-op">,</tt> <tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">rescaleTo8bit</tt><tt class="py-op">=</tt><tt id="link-957" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-957', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-string">"rgba"</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-param">params</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="saveTiffMultipage-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="saveTiffMultipage-expanded"><a name="L2822"></a><tt class="py-lineno">2822</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2823"></a><tt class="py-lineno">2823</tt>  <tt class="py-line"><tt class="py-docstring">    extension to PIL save TIFF</tt> </tt>
<a name="L2824"></a><tt class="py-lineno">2824</tt>  <tt class="py-line"><tt class="py-docstring">    if rescaleTo8bit: scale sections (using global(!) min &amp; max intesity) to 0..255</tt> </tt>
<a name="L2825"></a><tt class="py-lineno">2825</tt>  <tt class="py-line"><tt class="py-docstring">        (ratios between colors are unchanged)</tt> </tt>
<a name="L2826"></a><tt class="py-lineno">2826</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2827"></a><tt class="py-lineno">2827</tt>  <tt class="py-line"><tt class="py-docstring">    **params is directly forwarded to PIL save function</tt> </tt>
<a name="L2828"></a><tt class="py-lineno">2828</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2829"></a><tt class="py-lineno">2829</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-958" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-958', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-959" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-959', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">4</tt><tt class="py-op">:</tt> </tt>
<a name="L2830"></a><tt class="py-lineno">2830</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-960" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-960', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-961" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-961', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-keyword">not</tt> <tt class="py-keyword">in</tt> <tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-number">3</tt><tt class="py-op">,</tt><tt class="py-number">4</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2831"></a><tt class="py-lineno">2831</tt>  <tt class="py-line">            <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"can save 4d arrays (color) only with second dim of len 1..4 (RG[B[A]])"</tt> </tt>
<a name="L2832"></a><tt class="py-lineno">2832</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt id="link-962" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-962', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-963" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-963', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">!=</tt> <tt class="py-number">3</tt><tt class="py-op">:</tt> </tt>
<a name="L2833"></a><tt class="py-lineno">2833</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"can only save 3d (grey) or 4d (color) arrays"</tt> </tt>
<a name="L2834"></a><tt class="py-lineno">2834</tt>  <tt class="py-line"> </tt>
<a name="L2835"></a><tt class="py-lineno">2835</tt>  <tt class="py-line">    <tt class="py-name">fp</tt> <tt class="py-op">=</tt> <tt id="link-964" class="py-name"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-964', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-string">'w+b'</tt><tt class="py-op">)</tt> </tt>
<a name="L2836"></a><tt class="py-lineno">2836</tt>  <tt class="py-line"> </tt>
<a name="L2837"></a><tt class="py-lineno">2837</tt>  <tt class="py-line">    <tt class="py-name">ifd_offsets</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L2838"></a><tt class="py-lineno">2838</tt>  <tt class="py-line"> </tt>
<a name="L2839"></a><tt class="py-lineno">2839</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">rescaleTo8bit</tt><tt class="py-op">:</tt> </tt>
<a name="L2840"></a><tt class="py-lineno">2840</tt>  <tt class="py-line">        <tt class="py-name">mi</tt><tt class="py-op">,</tt><tt class="py-name">ma</tt> <tt class="py-op">=</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt id="link-965" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-965', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-966" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-966', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt id="link-967" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-967', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-968" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-968', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2841"></a><tt class="py-lineno">2841</tt>  <tt class="py-line">        <tt class="py-name">ra</tt> <tt class="py-op">=</tt> <tt class="py-name">ma</tt><tt class="py-op">-</tt><tt class="py-name">mi</tt> </tt>
<a name="L2842"></a><tt class="py-lineno">2842</tt>  <tt class="py-line"> </tt>
<a name="L2843"></a><tt class="py-lineno">2843</tt>  <tt class="py-line">    <tt class="py-name">params</tt><tt class="py-op">[</tt><tt class="py-string">"_debug_multipage"</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt id="link-969" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-969', 'True', 'link-38');">True</a></tt> </tt>
<a name="L2844"></a><tt class="py-lineno">2844</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">z</tt> <tt class="py-keyword">in</tt> <tt id="link-970" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-970', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt id="link-971" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-971', 'arr', 'link-41');">arr</a></tt><tt class="py-op">.</tt><tt id="link-972" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-972', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2845"></a><tt class="py-lineno">2845</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">rescaleTo8bit</tt><tt class="py-op">:</tt> </tt>
<a name="L2846"></a><tt class="py-lineno">2846</tt>  <tt class="py-line">            <tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt id="link-973" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-973', 'arr', 'link-41');">arr</a></tt><tt class="py-op">[</tt><tt class="py-name">z</tt><tt class="py-op">]</tt><tt class="py-op">-</tt><tt class="py-name">mi</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-number">255.</tt><tt class="py-op">/</tt><tt class="py-name">ra</tt> </tt>
<a name="L2847"></a><tt class="py-lineno">2847</tt>  <tt class="py-line">            <tt class="py-name">ii</tt> <tt class="py-op">=</tt> <tt id="link-974" class="py-name"><a title="Priithon.useful.array2image" class="py-name" href="#" onclick="return doclink('link-974', 'array2image', 'link-872');">array2image</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">astype</tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt> </tt>
<a name="L2848"></a><tt class="py-lineno">2848</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2849"></a><tt class="py-lineno">2849</tt>  <tt class="py-line">            <tt class="py-name">ii</tt> <tt class="py-op">=</tt> <tt id="link-975" class="py-name"><a title="Priithon.useful.array2image" class="py-name" href="#" onclick="return doclink('link-975', 'array2image', 'link-872');">array2image</a></tt><tt class="py-op">(</tt><tt id="link-976" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-976', 'arr', 'link-41');">arr</a></tt><tt class="py-op">[</tt><tt class="py-name">z</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt> </tt>
<a name="L2850"></a><tt class="py-lineno">2850</tt>  <tt class="py-line"> </tt>
<a name="L2851"></a><tt class="py-lineno">2851</tt>  <tt class="py-line">        <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">)</tt> <tt class="py-comment"># go to end of file</tt> </tt>
<a name="L2852"></a><tt class="py-lineno">2852</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">z</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L2853"></a><tt class="py-lineno">2853</tt>  <tt class="py-line">            <tt class="py-comment"># ref. PIL  TiffImagePlugin</tt> </tt>
<a name="L2854"></a><tt class="py-lineno">2854</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment"># PIL always starts the first IFD at offset 8</tt> </tt>
<a name="L2855"></a><tt class="py-lineno">2855</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-name">ifdOffset</tt> <tt class="py-op">=</tt> <tt class="py-number">8</tt> </tt>
<a name="L2856"></a><tt class="py-lineno">2856</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2857"></a><tt class="py-lineno">2857</tt>  <tt class="py-line">            <tt class="py-name">ifdOffset</tt> <tt class="py-op">=</tt> <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt class="py-name">tell</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2858"></a><tt class="py-lineno">2858</tt>  <tt class="py-line"> </tt>
<a name="L2859"></a><tt class="py-lineno">2859</tt>  <tt class="py-line">        <tt class="py-name">ii</tt><tt class="py-op">.</tt><tt id="link-977" class="py-name"><a title="Priithon.Mrc.save
Priithon.mmviewer.GLViewer.save
Priithon.plt.interface.save
Priithon.plt.wxplt.plot_canvas.save
Priithon.py.buffer.Buffer.save" class="py-name" href="#" onclick="return doclink('link-977', 'save', 'link-874');">save</a></tt><tt class="py-op">(</tt><tt class="py-name">fp</tt><tt class="py-op">,</tt> <tt class="py-name">format</tt><tt class="py-op">=</tt><tt class="py-string">"TIFF"</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-name">params</tt><tt class="py-op">)</tt> </tt>
<a name="L2860"></a><tt class="py-lineno">2860</tt>  <tt class="py-line">         </tt>
<a name="L2861"></a><tt class="py-lineno">2861</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">z</tt><tt class="py-op">&gt;</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> <tt class="py-comment"># correct "next" entry of previous ifd -- connect !</tt> </tt>
<a name="L2862"></a><tt class="py-lineno">2862</tt>  <tt class="py-line">            <tt class="py-name">ifdo</tt> <tt class="py-op">=</tt> <tt class="py-name">ifd_offsets</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L2863"></a><tt class="py-lineno">2863</tt>  <tt class="py-line">            <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt class="py-name">ifdo</tt><tt class="py-op">)</tt> </tt>
<a name="L2864"></a><tt class="py-lineno">2864</tt>  <tt class="py-line">            <tt class="py-name">ifdLength</tt> <tt class="py-op">=</tt> <tt class="py-name">ii</tt><tt class="py-op">.</tt><tt class="py-name">_debug_multipage</tt><tt class="py-op">.</tt><tt class="py-name">i16</tt><tt class="py-op">(</tt><tt class="py-name">fp</tt><tt class="py-op">.</tt><tt id="link-978" class="py-name" targets="Method Priithon.py.document.Document.read()=Priithon.py.document.Document-class.html#read"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-978', 'read', 'link-978');">read</a></tt><tt class="py-op">(</tt><tt class="py-number">2</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2865"></a><tt class="py-lineno">2865</tt>  <tt class="py-line">            <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt class="py-name">ifdLength</tt><tt class="py-op">*</tt><tt class="py-number">12</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> <tt class="py-comment"># go to "next" field near end of ifd</tt> </tt>
<a name="L2866"></a><tt class="py-lineno">2866</tt>  <tt class="py-line">            <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt id="link-979" class="py-name" targets="Method Priithon.Scientific_IO_TextFile.TextFile.write()=Priithon.Scientific_IO_TextFile.TextFile-class.html#write,Method Priithon.py.document.Document.write()=Priithon.py.document.Document-class.html#write,Method Priithon.py.editwindow.EditWindow.write()=Priithon.py.editwindow.EditWindow-class.html#write,Method Priithon.py.pseudo.PseudoFile.write()=Priithon.py.pseudo.PseudoFile-class.html#write,Method Priithon.py.shell.Shell.write()=Priithon.py.shell.Shell-class.html#write"><a title="Priithon.Scientific_IO_TextFile.TextFile.write
Priithon.py.document.Document.write
Priithon.py.editwindow.EditWindow.write
Priithon.py.pseudo.PseudoFile.write
Priithon.py.shell.Shell.write" class="py-name" href="#" onclick="return doclink('link-979', 'write', 'link-979');">write</a></tt><tt class="py-op">(</tt><tt class="py-name">ii</tt><tt class="py-op">.</tt><tt class="py-name">_debug_multipage</tt><tt class="py-op">.</tt><tt class="py-name">o32</tt><tt class="py-op">(</tt> <tt class="py-name">ifdOffset</tt> <tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2867"></a><tt class="py-lineno">2867</tt>  <tt class="py-line"> </tt>
<a name="L2868"></a><tt class="py-lineno">2868</tt>  <tt class="py-line">        <tt class="py-name">ifd_offsets</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">ifdOffset</tt><tt class="py-op">)</tt> </tt>
<a name="L2869"></a><tt class="py-lineno">2869</tt>  <tt class="py-line">    <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt id="link-980" class="py-name" targets="Method Priithon.Mrc.Mrc.close()=Priithon.Mrc.Mrc-class.html#close,Method Priithon.Mrc.Mrc2.close()=Priithon.Mrc.Mrc2-class.html#close,Method Priithon.Scientific_IO_TextFile.TextFile.close()=Priithon.Scientific_IO_TextFile.TextFile-class.html#close,Method Priithon.plt.dumbdbm_patched._Database.close()=Priithon.plt.dumbdbm_patched._Database-class.html#close,Function Priithon.plt.interface.close()=Priithon.plt.interface-module.html#close,Method Priithon.readerSPE.File.close()=Priithon.readerSPE.File-class.html#close"><a title="Priithon.Mrc.Mrc.close
Priithon.Mrc.Mrc2.close
Priithon.Scientific_IO_TextFile.TextFile.close
Priithon.plt.dumbdbm_patched._Database.close
Priithon.plt.interface.close
Priithon.readerSPE.File.close" class="py-name" href="#" onclick="return doclink('link-980', 'close', 'link-980');">close</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2870"></a><tt class="py-lineno">2870</tt>  <tt class="py-line"> </tt>
<a name="saveTiffMultipageFromSeq"></a><div id="saveTiffMultipageFromSeq-def"><a name="L2871"></a><tt class="py-lineno">2871</tt> <a class="py-toggle" href="#" id="saveTiffMultipageFromSeq-toggle" onclick="return toggle('saveTiffMultipageFromSeq');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#saveTiffMultipageFromSeq">saveTiffMultipageFromSeq</a><tt class="py-op">(</tt><tt class="py-param">arrseq</tt><tt class="py-op">,</tt> <tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">rescaleSeqTo8bit</tt><tt class="py-op">=</tt><tt id="link-981" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-981', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-string">"rgba"</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-param">params</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="saveTiffMultipageFromSeq-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="saveTiffMultipageFromSeq-expanded"><a name="L2872"></a><tt class="py-lineno">2872</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2873"></a><tt class="py-lineno">2873</tt>  <tt class="py-line"><tt class="py-docstring">    arrseq can be an iterator that yield 2D(grey) or 3D(color) image</tt> </tt>
<a name="L2874"></a><tt class="py-lineno">2874</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2875"></a><tt class="py-lineno">2875</tt>  <tt class="py-line"><tt class="py-docstring">    extension to PIL save TIFF</tt> </tt>
<a name="L2876"></a><tt class="py-lineno">2876</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2877"></a><tt class="py-lineno">2877</tt>  <tt class="py-line"><tt class="py-docstring">    if rescaleSeqTo8bit: scale each section (separately!) to 0..255</tt> </tt>
<a name="L2878"></a><tt class="py-lineno">2878</tt>  <tt class="py-line"><tt class="py-docstring">        (ratios between colors are unchanged)</tt> </tt>
<a name="L2879"></a><tt class="py-lineno">2879</tt>  <tt class="py-line"><tt class="py-docstring">    **params is directly forwarded to PIL save function</tt> </tt>
<a name="L2880"></a><tt class="py-lineno">2880</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2881"></a><tt class="py-lineno">2881</tt>  <tt class="py-line"><tt class="py-comment">#     if arr.ndim == 4:</tt> </tt>
<a name="L2882"></a><tt class="py-lineno">2882</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#         if arr.shape[1] not in (1,2,3,4):</tt> </tt>
<a name="L2883"></a><tt class="py-lineno">2883</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#             raise ValueError, "can save 4d arrays (color) only with second dim of len 1..4 (RG[B[A]])"</tt> </tt>
<a name="L2884"></a><tt class="py-lineno">2884</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#     elif arr.ndim != 3:</tt> </tt>
<a name="L2885"></a><tt class="py-lineno">2885</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#         raise ValueError, "can only save 3d (grey) or 4d (color) arrays"</tt> </tt>
<a name="L2886"></a><tt class="py-lineno">2886</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L2887"></a><tt class="py-lineno">2887</tt>  <tt class="py-line">    <tt class="py-name">fp</tt> <tt class="py-op">=</tt> <tt id="link-982" class="py-name"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-982', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-string">'w+b'</tt><tt class="py-op">)</tt> </tt>
<a name="L2888"></a><tt class="py-lineno">2888</tt>  <tt class="py-line"> </tt>
<a name="L2889"></a><tt class="py-lineno">2889</tt>  <tt class="py-line">    <tt class="py-name">ifd_offsets</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L2890"></a><tt class="py-lineno">2890</tt>  <tt class="py-line"> </tt>
<a name="L2891"></a><tt class="py-lineno">2891</tt>  <tt class="py-line"><tt class="py-comment">#     if rescaleTo8bit:</tt> </tt>
<a name="L2892"></a><tt class="py-lineno">2892</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#         mi,ma = float(arr.min()), float(arr.max())</tt> </tt>
<a name="L2893"></a><tt class="py-lineno">2893</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">#         ra = ma-mi</tt> </tt>
<a name="L2894"></a><tt class="py-lineno">2894</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L2895"></a><tt class="py-lineno">2895</tt>  <tt class="py-line">    <tt class="py-name">params</tt><tt class="py-op">[</tt><tt class="py-string">"_debug_multipage"</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt id="link-983" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-983', 'True', 'link-38');">True</a></tt> </tt>
<a name="L2896"></a><tt class="py-lineno">2896</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">z</tt><tt class="py-op">,</tt><tt class="py-name">a</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">arrseq</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2897"></a><tt class="py-lineno">2897</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">rescaleSeqTo8bit</tt><tt class="py-op">:</tt> </tt>
<a name="L2898"></a><tt class="py-lineno">2898</tt>  <tt class="py-line">            <tt class="py-name">mi</tt><tt class="py-op">,</tt><tt class="py-name">ma</tt> <tt class="py-op">=</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-984" class="py-name"><a title="Priithon.useful.min" class="py-name" href="#" onclick="return doclink('link-984', 'min', 'link-171');">min</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">float</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-985" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-985', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2899"></a><tt class="py-lineno">2899</tt>  <tt class="py-line">            <tt class="py-name">ra</tt> <tt class="py-op">=</tt> <tt class="py-name">ma</tt><tt class="py-op">-</tt><tt class="py-name">mi</tt> </tt>
<a name="L2900"></a><tt class="py-lineno">2900</tt>  <tt class="py-line">            <tt class="py-name">a</tt><tt class="py-op">=</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">-</tt><tt class="py-name">mi</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt class="py-number">255.</tt><tt class="py-op">/</tt><tt class="py-name">ra</tt> </tt>
<a name="L2901"></a><tt class="py-lineno">2901</tt>  <tt class="py-line">            <tt class="py-name">ii</tt> <tt class="py-op">=</tt> <tt id="link-986" class="py-name"><a title="Priithon.useful.array2image" class="py-name" href="#" onclick="return doclink('link-986', 'array2image', 'link-872');">array2image</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">astype</tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt> </tt>
<a name="L2902"></a><tt class="py-lineno">2902</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2903"></a><tt class="py-lineno">2903</tt>  <tt class="py-line">            <tt class="py-name">ii</tt> <tt class="py-op">=</tt> <tt id="link-987" class="py-name"><a title="Priithon.useful.array2image" class="py-name" href="#" onclick="return doclink('link-987', 'array2image', 'link-872');">array2image</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">rgbOrder</tt><tt class="py-op">=</tt><tt class="py-name">rgbOrder</tt><tt class="py-op">)</tt> </tt>
<a name="L2904"></a><tt class="py-lineno">2904</tt>  <tt class="py-line"> </tt>
<a name="L2905"></a><tt class="py-lineno">2905</tt>  <tt class="py-line">        <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">)</tt> <tt class="py-comment"># go to end of file</tt> </tt>
<a name="L2906"></a><tt class="py-lineno">2906</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">z</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L2907"></a><tt class="py-lineno">2907</tt>  <tt class="py-line">            <tt class="py-comment"># ref. PIL  TiffImagePlugin</tt> </tt>
<a name="L2908"></a><tt class="py-lineno">2908</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-comment"># PIL always starts the first IFD at offset 8</tt> </tt>
<a name="L2909"></a><tt class="py-lineno">2909</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-name">ifdOffset</tt> <tt class="py-op">=</tt> <tt class="py-number">8</tt> </tt>
<a name="L2910"></a><tt class="py-lineno">2910</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2911"></a><tt class="py-lineno">2911</tt>  <tt class="py-line">            <tt class="py-name">ifdOffset</tt> <tt class="py-op">=</tt> <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt class="py-name">tell</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2912"></a><tt class="py-lineno">2912</tt>  <tt class="py-line"> </tt>
<a name="L2913"></a><tt class="py-lineno">2913</tt>  <tt class="py-line">        <tt class="py-name">ii</tt><tt class="py-op">.</tt><tt id="link-988" class="py-name"><a title="Priithon.Mrc.save
Priithon.mmviewer.GLViewer.save
Priithon.plt.interface.save
Priithon.plt.wxplt.plot_canvas.save
Priithon.py.buffer.Buffer.save" class="py-name" href="#" onclick="return doclink('link-988', 'save', 'link-874');">save</a></tt><tt class="py-op">(</tt><tt class="py-name">fp</tt><tt class="py-op">,</tt> <tt class="py-name">format</tt><tt class="py-op">=</tt><tt class="py-string">"TIFF"</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-name">params</tt><tt class="py-op">)</tt> </tt>
<a name="L2914"></a><tt class="py-lineno">2914</tt>  <tt class="py-line">         </tt>
<a name="L2915"></a><tt class="py-lineno">2915</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">z</tt><tt class="py-op">&gt;</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> <tt class="py-comment"># correct "next" entry of previous ifd -- connect !</tt> </tt>
<a name="L2916"></a><tt class="py-lineno">2916</tt>  <tt class="py-line">            <tt class="py-name">ifdo</tt> <tt class="py-op">=</tt> <tt class="py-name">ifd_offsets</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L2917"></a><tt class="py-lineno">2917</tt>  <tt class="py-line">            <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt class="py-name">ifdo</tt><tt class="py-op">)</tt> </tt>
<a name="L2918"></a><tt class="py-lineno">2918</tt>  <tt class="py-line">            <tt class="py-name">ifdLength</tt> <tt class="py-op">=</tt> <tt class="py-name">ii</tt><tt class="py-op">.</tt><tt class="py-name">_debug_multipage</tt><tt class="py-op">.</tt><tt class="py-name">i16</tt><tt class="py-op">(</tt><tt class="py-name">fp</tt><tt class="py-op">.</tt><tt id="link-989" class="py-name"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-989', 'read', 'link-978');">read</a></tt><tt class="py-op">(</tt><tt class="py-number">2</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2919"></a><tt class="py-lineno">2919</tt>  <tt class="py-line">            <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt class="py-name">seek</tt><tt class="py-op">(</tt><tt class="py-name">ifdLength</tt><tt class="py-op">*</tt><tt class="py-number">12</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> <tt class="py-comment"># go to "next" field near end of ifd</tt> </tt>
<a name="L2920"></a><tt class="py-lineno">2920</tt>  <tt class="py-line">            <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt id="link-990" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.write
Priithon.py.document.Document.write
Priithon.py.editwindow.EditWindow.write
Priithon.py.pseudo.PseudoFile.write
Priithon.py.shell.Shell.write" class="py-name" href="#" onclick="return doclink('link-990', 'write', 'link-979');">write</a></tt><tt class="py-op">(</tt><tt class="py-name">ii</tt><tt class="py-op">.</tt><tt class="py-name">_debug_multipage</tt><tt class="py-op">.</tt><tt class="py-name">o32</tt><tt class="py-op">(</tt> <tt class="py-name">ifdOffset</tt> <tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L2921"></a><tt class="py-lineno">2921</tt>  <tt class="py-line"> </tt>
<a name="L2922"></a><tt class="py-lineno">2922</tt>  <tt class="py-line">        <tt class="py-name">ifd_offsets</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">ifdOffset</tt><tt class="py-op">)</tt> </tt>
<a name="L2923"></a><tt class="py-lineno">2923</tt>  <tt class="py-line">    <tt class="py-name">fp</tt><tt class="py-op">.</tt><tt id="link-991" class="py-name"><a title="Priithon.Mrc.Mrc.close
Priithon.Mrc.Mrc2.close
Priithon.Scientific_IO_TextFile.TextFile.close
Priithon.plt.dumbdbm_patched._Database.close
Priithon.plt.interface.close
Priithon.readerSPE.File.close" class="py-name" href="#" onclick="return doclink('link-991', 'close', 'link-980');">close</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L2924"></a><tt class="py-lineno">2924</tt>  <tt class="py-line"> </tt>
<a name="loadImageFromURL"></a><div id="loadImageFromURL-def"><a name="L2925"></a><tt class="py-lineno">2925</tt> <a class="py-toggle" href="#" id="loadImageFromURL-toggle" onclick="return toggle('loadImageFromURL');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#loadImageFromURL">loadImageFromURL</a><tt class="py-op">(</tt><tt class="py-param">url</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="loadImageFromURL-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="loadImageFromURL-expanded"><a name="L2926"></a><tt class="py-lineno">2926</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2927"></a><tt class="py-lineno">2927</tt>  <tt class="py-line"><tt class="py-docstring">    download url of an image file</tt> </tt>
<a name="L2928"></a><tt class="py-lineno">2928</tt>  <tt class="py-line"><tt class="py-docstring">    into local cache and </tt> </tt>
<a name="L2929"></a><tt class="py-lineno">2929</tt>  <tt class="py-line"><tt class="py-docstring">    return numpy array </tt> </tt>
<a name="L2930"></a><tt class="py-lineno">2930</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2931"></a><tt class="py-lineno">2931</tt>  <tt class="py-line">    <tt class="py-comment">#import urllib</tt> </tt>
<a name="L2932"></a><tt class="py-lineno">2932</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#fp = urllib.urlretrieve(url, filename=None, reporthook=None, data=None)</tt> </tt>
<a name="L2933"></a><tt class="py-lineno">2933</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     &gt;&gt;&gt; fp[0]</tt> </tt>
<a name="L2934"></a><tt class="py-lineno">2934</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     'c:\docume~1\haase\locals~1\temp\tmpgpcmwo.jpg'</tt> </tt>
<a name="L2935"></a><tt class="py-lineno">2935</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     &gt;&gt;&gt; fp[1]</tt> </tt>
<a name="L2936"></a><tt class="py-lineno">2936</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     Date: Sat, 29 Sep 2007 21:03:15 GMT</tt> </tt>
<a name="L2937"></a><tt class="py-lineno">2937</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     Server: Apache/1.3.27 (Unix)  (Red-Hat/Linux)</tt> </tt>
<a name="L2938"></a><tt class="py-lineno">2938</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     P3P: CP="NOI DSP COR NID ADM DEV TAI PSA PUBo STP PHY"</tt> </tt>
<a name="L2939"></a><tt class="py-lineno">2939</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     Last-Modified: Mon, 18 Oct 1999 17:32:10 GMT</tt> </tt>
<a name="L2940"></a><tt class="py-lineno">2940</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     ETag: "4b75a-7aca-380b599a"</tt> </tt>
<a name="L2941"></a><tt class="py-lineno">2941</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     Accept-Ranges: bytes</tt> </tt>
<a name="L2942"></a><tt class="py-lineno">2942</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     Content-Length: 31434</tt> </tt>
<a name="L2943"></a><tt class="py-lineno">2943</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     Connection: close</tt> </tt>
<a name="L2944"></a><tt class="py-lineno">2944</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     Content-Type: image/jpeg </tt> </tt>
<a name="L2945"></a><tt class="py-lineno">2945</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     &gt;&gt;&gt; fp[2]</tt> </tt>
<a name="L2946"></a><tt class="py-lineno">2946</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#     IndexError: tuple index out of range</tt> </tt>
<a name="L2947"></a><tt class="py-lineno">2947</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#arr = loadImg(fp[0])</tt> </tt>
<a name="L2948"></a><tt class="py-lineno">2948</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L2949"></a><tt class="py-lineno">2949</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">urllib2</tt><tt class="py-op">,</tt> <tt class="py-name">StringIO</tt> </tt>
<a name="L2950"></a><tt class="py-lineno">2950</tt>  <tt class="py-line">    <tt class="py-name">u</tt> <tt class="py-op">=</tt> <tt class="py-name">urllib2</tt><tt class="py-op">.</tt><tt class="py-name">urlopen</tt><tt class="py-op">(</tt><tt class="py-name">url</tt><tt class="py-op">)</tt> </tt>
<a name="L2951"></a><tt class="py-lineno">2951</tt>  <tt class="py-line">    <tt class="py-comment">#&lt;addinfourl at 77154064 whose fp = &lt;socket._fileobject object at 0x49829b0&gt;&gt;</tt> </tt>
<a name="L2952"></a><tt class="py-lineno">2952</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">s</tt> <tt class="py-op">=</tt> <tt class="py-name">u</tt><tt class="py-op">.</tt><tt id="link-992" class="py-name"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-992', 'read', 'link-978');">read</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2953"></a><tt class="py-lineno">2953</tt>  <tt class="py-line">    <tt class="py-comment">#import imghdr</tt> </tt>
<a name="L2954"></a><tt class="py-lineno">2954</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#imghdr.what(StringIO.StringIO(s))</tt> </tt>
<a name="L2955"></a><tt class="py-lineno">2955</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#'jpeg'</tt> </tt>
<a name="L2956"></a><tt class="py-lineno">2956</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">f</tt> <tt class="py-op">=</tt> <tt class="py-name">StringIO</tt><tt class="py-op">.</tt><tt class="py-name">StringIO</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">)</tt> </tt>
<a name="L2957"></a><tt class="py-lineno">2957</tt>  <tt class="py-line"> </tt>
<a name="L2958"></a><tt class="py-lineno">2958</tt>  <tt class="py-line">    <tt id="link-993" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-993', 'arr', 'link-41');">arr</a></tt> <tt class="py-op">=</tt> <tt id="link-994" class="py-name"><a title="Priithon.useful.loadImg" class="py-name" href="#" onclick="return doclink('link-994', 'loadImg', 'link-821');">loadImg</a></tt><tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">)</tt> </tt>
<a name="L2959"></a><tt class="py-lineno">2959</tt>  <tt class="py-line"> </tt>
<a name="L2960"></a><tt class="py-lineno">2960</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-995" class="py-name"><a title="Priithon.useful.arr" class="py-name" href="#" onclick="return doclink('link-995', 'arr', 'link-41');">arr</a></tt> </tt>
</div><a name="L2961"></a><tt class="py-lineno">2961</tt>  <tt class="py-line"> </tt>
<a name="L2962"></a><tt class="py-lineno">2962</tt>  <tt class="py-line"> </tt>
<a name="L2963"></a><tt class="py-lineno">2963</tt>  <tt class="py-line"><tt class="py-comment">###############################################################</tt> </tt>
<a name="L2964"></a><tt class="py-lineno">2964</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">###############################################################</tt> </tt>
<a name="L2965"></a><tt class="py-lineno">2965</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="calc_threshold_basic"></a><div id="calc_threshold_basic-def"><a name="L2966"></a><tt class="py-lineno">2966</tt> <a class="py-toggle" href="#" id="calc_threshold_basic-toggle" onclick="return toggle('calc_threshold_basic');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#calc_threshold_basic">calc_threshold_basic</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">histYX</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">dt</tt><tt class="py-op">=</tt><tt class="py-number">.5</tt><tt class="py-op">,</tt> <tt class="py-param">nMax</tt><tt class="py-op">=</tt><tt class="py-number">100</tt><tt class="py-op">,</tt> <tt class="py-param">retImg</tt> <tt class="py-op">=</tt> <tt id="link-996" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-996', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="calc_threshold_basic-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="calc_threshold_basic-expanded"><a name="L2967"></a><tt class="py-lineno">2967</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L2968"></a><tt class="py-lineno">2968</tt>  <tt class="py-line"><tt class="py-docstring">    calculate a threshold value</tt> </tt>
<a name="L2969"></a><tt class="py-lineno">2969</tt>  <tt class="py-line"><tt class="py-docstring">    using the "Basic Global Thresholding" method</tt> </tt>
<a name="L2970"></a><tt class="py-lineno">2970</tt>  <tt class="py-line"><tt class="py-docstring">    described in Ch. 10.3.2 in "Digital Image Processing"</tt> </tt>
<a name="L2971"></a><tt class="py-lineno">2971</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2972"></a><tt class="py-lineno">2972</tt>  <tt class="py-line"><tt class="py-docstring">    returns threshold T (1 for a&gt;T; not &gt;=T)</tt> </tt>
<a name="L2973"></a><tt class="py-lineno">2973</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2974"></a><tt class="py-lineno">2974</tt>  <tt class="py-line"><tt class="py-docstring">    stop iteration when T doesn't change more than dt</tt> </tt>
<a name="L2975"></a><tt class="py-lineno">2975</tt>  <tt class="py-line"><tt class="py-docstring">    or after nMax iterations</tt> </tt>
<a name="L2976"></a><tt class="py-lineno">2976</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2977"></a><tt class="py-lineno">2977</tt>  <tt class="py-line"><tt class="py-docstring">    histYX, is the histogram of a -- a tuple(binCount, binPixelValue)</tt> </tt>
<a name="L2978"></a><tt class="py-lineno">2978</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L2979"></a><tt class="py-lineno">2979</tt>  <tt class="py-line"><tt class="py-docstring">    if retImg:</tt> </tt>
<a name="L2980"></a><tt class="py-lineno">2980</tt>  <tt class="py-line"><tt class="py-docstring">        returns thresholded image as uint8 </tt> </tt>
<a name="L2981"></a><tt class="py-lineno">2981</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L2982"></a><tt class="py-lineno">2982</tt>  <tt class="py-line"> </tt>
<a name="L2983"></a><tt class="py-lineno">2983</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">histYX</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L2984"></a><tt class="py-lineno">2984</tt>  <tt class="py-line">        <tt class="py-name">h</tt><tt class="py-op">,</tt><tt id="link-997" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-997', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt id="link-998" class="py-name"><a title="Priithon.useful.histogramYX" class="py-name" href="#" onclick="return doclink('link-998', 'histogramYX', 'link-600');">histogramYX</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L2985"></a><tt class="py-lineno">2985</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L2986"></a><tt class="py-lineno">2986</tt>  <tt class="py-line">        <tt class="py-name">h</tt><tt class="py-op">,</tt><tt id="link-999" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-999', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt class="py-name">histYX</tt> </tt>
<a name="L2987"></a><tt class="py-lineno">2987</tt>  <tt class="py-line"> </tt>
<a name="L2988"></a><tt class="py-lineno">2988</tt>  <tt class="py-line">    <tt class="py-name">m1</tt><tt class="py-op">,</tt><tt class="py-name">m2</tt> <tt class="py-op">=</tt> <tt id="link-1000" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1000', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt id="link-1001" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1001', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L2989"></a><tt class="py-lineno">2989</tt>  <tt class="py-line">    <tt class="py-name">T</tt> <tt class="py-op">=</tt> <tt class="py-number">.5</tt><tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-name">m1</tt><tt class="py-op">+</tt><tt class="py-name">m2</tt><tt class="py-op">)</tt> </tt>
<a name="L2990"></a><tt class="py-lineno">2990</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-1002" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1002', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">xrange</tt><tt class="py-op">(</tt><tt class="py-name">nMax</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L2991"></a><tt class="py-lineno">2991</tt>  <tt class="py-line">        <tt class="py-name">ix1</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">where</tt><tt class="py-op">(</tt><tt id="link-1003" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1003', 'x', 'link-481');">x</a></tt><tt class="py-op">&lt;=</tt><tt class="py-name">T</tt><tt class="py-op">)</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L2992"></a><tt class="py-lineno">2992</tt>  <tt class="py-line">        <tt class="py-name">ix2</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">where</tt><tt class="py-op">(</tt><tt id="link-1004" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1004', 'x', 'link-481');">x</a></tt><tt class="py-op">&gt;</tt> <tt class="py-name">T</tt><tt class="py-op">)</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L2993"></a><tt class="py-lineno">2993</tt>  <tt class="py-line">        <tt class="py-name">m1</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">h</tt><tt class="py-op">[</tt><tt class="py-name">ix1</tt><tt class="py-op">]</tt><tt class="py-op">*</tt><tt id="link-1005" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1005', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">ix1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">h</tt><tt class="py-op">[</tt><tt class="py-name">ix1</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2994"></a><tt class="py-lineno">2994</tt>  <tt class="py-line">        <tt class="py-name">m2</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">h</tt><tt class="py-op">[</tt><tt class="py-name">ix2</tt><tt class="py-op">]</tt><tt class="py-op">*</tt><tt id="link-1006" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1006', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">ix2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">h</tt><tt class="py-op">[</tt><tt class="py-name">ix2</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L2995"></a><tt class="py-lineno">2995</tt>  <tt class="py-line"> </tt>
<a name="L2996"></a><tt class="py-lineno">2996</tt>  <tt class="py-line">        <tt class="py-name">Tnew</tt> <tt class="py-op">=</tt> <tt class="py-number">.5</tt><tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-name">m1</tt><tt class="py-op">+</tt><tt class="py-name">m2</tt><tt class="py-op">)</tt> </tt>
<a name="L2997"></a><tt class="py-lineno">2997</tt>  <tt class="py-line"> </tt>
<a name="L2998"></a><tt class="py-lineno">2998</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">abs</tt><tt class="py-op">(</tt><tt class="py-name">T</tt><tt class="py-op">-</tt><tt class="py-name">Tnew</tt><tt class="py-op">)</tt> <tt class="py-op">&lt;</tt> <tt class="py-name">dt</tt><tt class="py-op">:</tt> </tt>
<a name="L2999"></a><tt class="py-lineno">2999</tt>  <tt class="py-line">            <tt class="py-keyword">break</tt> </tt>
<a name="L3000"></a><tt class="py-lineno">3000</tt>  <tt class="py-line">        <tt class="py-name">T</tt><tt class="py-op">=</tt><tt class="py-name">Tnew</tt> </tt>
<a name="L3001"></a><tt class="py-lineno">3001</tt>  <tt class="py-line"> </tt>
<a name="L3002"></a><tt class="py-lineno">3002</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">retImg</tt><tt class="py-op">:</tt> </tt>
<a name="L3003"></a><tt class="py-lineno">3003</tt>  <tt class="py-line">        <tt class="py-name">qq</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ones</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-1007" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1007', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt> <tt id="link-1008" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1008', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt><tt class="py-op">)</tt><tt class="py-comment">#N.select([a&gt;x2,a&gt;x1], [N.ones(a.shape, dtype=N.uint8)])</tt> </tt>
<a name="L3004"></a><tt class="py-lineno">3004</tt>  <tt class="py-line">        <tt class="py-name">qq</tt><tt class="py-op">[</tt><tt class="py-name">a</tt><tt class="py-op">&lt;=</tt><tt class="py-name">Tnew</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L3005"></a><tt class="py-lineno">3005</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">qq</tt> </tt>
<a name="L3006"></a><tt class="py-lineno">3006</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3007"></a><tt class="py-lineno">3007</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">Tnew</tt> </tt>
</div><a name="L3008"></a><tt class="py-lineno">3008</tt>  <tt class="py-line"> </tt>
<a name="L3009"></a><tt class="py-lineno">3009</tt>  <tt class="py-line"> </tt>
<a name="calc_threshold_otsu"></a><div id="calc_threshold_otsu-def"><a name="L3010"></a><tt class="py-lineno">3010</tt> <a class="py-toggle" href="#" id="calc_threshold_otsu-toggle" onclick="return toggle('calc_threshold_otsu');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#calc_threshold_otsu">calc_threshold_otsu</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">histYX</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">retEM</tt><tt class="py-op">=</tt><tt id="link-1009" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1009', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">retImg</tt><tt class="py-op">=</tt><tt id="link-1010" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1010', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="calc_threshold_otsu-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="calc_threshold_otsu-expanded"><a name="L3011"></a><tt class="py-lineno">3011</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3012"></a><tt class="py-lineno">3012</tt>  <tt class="py-line"><tt class="py-docstring">    calculate a threshold value</tt> </tt>
<a name="L3013"></a><tt class="py-lineno">3013</tt>  <tt class="py-line"><tt class="py-docstring">    using "Otsu's Method"</tt> </tt>
<a name="L3014"></a><tt class="py-lineno">3014</tt>  <tt class="py-line"><tt class="py-docstring">    described in Ch. 10.3.3 in "Digital Image Processing"</tt> </tt>
<a name="L3015"></a><tt class="py-lineno">3015</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3016"></a><tt class="py-lineno">3016</tt>  <tt class="py-line"><tt class="py-docstring">    returns threshold T (1 for a&gt;T; not &gt;=T)</tt> </tt>
<a name="L3017"></a><tt class="py-lineno">3017</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3018"></a><tt class="py-lineno">3018</tt>  <tt class="py-line"><tt class="py-docstring">    histYX, is the histogram of `a` -- a tuple(binCount, binPixelValue)</tt> </tt>
<a name="L3019"></a><tt class="py-lineno">3019</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3020"></a><tt class="py-lineno">3020</tt>  <tt class="py-line"><tt class="py-docstring">    if retImg:</tt> </tt>
<a name="L3021"></a><tt class="py-lineno">3021</tt>  <tt class="py-line"><tt class="py-docstring">        returns thresholded image as uint8 </tt> </tt>
<a name="L3022"></a><tt class="py-lineno">3022</tt>  <tt class="py-line"><tt class="py-docstring">    elif retEM: </tt> </tt>
<a name="L3023"></a><tt class="py-lineno">3023</tt>  <tt class="py-line"><tt class="py-docstring">        returns (T, eta), where eta is the "segmentation measure" </tt> </tt>
<a name="L3024"></a><tt class="py-lineno">3024</tt>  <tt class="py-line"><tt class="py-docstring">                           (which might be Matlab's "effectiveness metric")</tt> </tt>
<a name="L3025"></a><tt class="py-lineno">3025</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3026"></a><tt class="py-lineno">3026</tt>  <tt class="py-line"><tt class="py-docstring">    TODO FIXME: this assumes a unique maximum for s2_B; </tt> </tt>
<a name="L3027"></a><tt class="py-lineno">3027</tt>  <tt class="py-line"><tt class="py-docstring">                 otherwise an average of the corresponding T values *should* be returned</tt> </tt>
<a name="L3028"></a><tt class="py-lineno">3028</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3029"></a><tt class="py-lineno">3029</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-1011" class="py-name"><a title="Priithon.fftfuncs" class="py-name" href="#" onclick="return doclink('link-1011', 'fftfuncs', 'link-452');">fftfuncs</a></tt> <tt class="py-keyword">as</tt> <tt class="py-name">F</tt> </tt>
<a name="L3030"></a><tt class="py-lineno">3030</tt>  <tt class="py-line"> </tt>
<a name="L3031"></a><tt class="py-lineno">3031</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">histYX</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3032"></a><tt class="py-lineno">3032</tt>  <tt class="py-line">        <tt class="py-name">h</tt><tt class="py-op">,</tt><tt id="link-1012" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1012', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt id="link-1013" class="py-name"><a title="Priithon.useful.histogramYX" class="py-name" href="#" onclick="return doclink('link-1013', 'histogramYX', 'link-600');">histogramYX</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L3033"></a><tt class="py-lineno">3033</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3034"></a><tt class="py-lineno">3034</tt>  <tt class="py-line">        <tt class="py-name">h</tt><tt class="py-op">,</tt><tt id="link-1014" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1014', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt class="py-name">histYX</tt> </tt>
<a name="L3035"></a><tt class="py-lineno">3035</tt>  <tt class="py-line"> </tt>
<a name="L3036"></a><tt class="py-lineno">3036</tt>  <tt class="py-line">    <tt class="py-name">p</tt> <tt class="py-op">=</tt> <tt class="py-name">F</tt><tt class="py-op">.</tt><tt id="link-1015" class="py-name" targets="Function Priithon.fftfuncs.zeroArrD()=Priithon.fftfuncs-module.html#zeroArrD"><a title="Priithon.fftfuncs.zeroArrD" class="py-name" href="#" onclick="return doclink('link-1015', 'zeroArrD', 'link-1015');">zeroArrD</a></tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">h</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L3037"></a><tt class="py-lineno">3037</tt>  <tt class="py-line">    <tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">h</tt> </tt>
<a name="L3038"></a><tt class="py-lineno">3038</tt>  <tt class="py-line">    <tt class="py-name">p</tt><tt class="py-op">/=</tt><tt class="py-name">h</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3039"></a><tt class="py-lineno">3039</tt>  <tt class="py-line"> </tt>
<a name="L3040"></a><tt class="py-lineno">3040</tt>  <tt class="py-line">    <tt class="py-name">P</tt> <tt class="py-op">=</tt> <tt class="py-name">p</tt><tt class="py-op">.</tt><tt class="py-name">cumsum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt>       <tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-comment"># exclude last value; cumsum will be approx. 1 - causing division by zero</tt> </tt>
<a name="L3041"></a><tt class="py-lineno">3041</tt>  <tt class="py-line">    <tt class="py-name">m</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt id="link-1016" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1016', 'x', 'link-481');">x</a></tt><tt class="py-op">*</tt><tt class="py-name">p</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">cumsum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt>  </tt>
<a name="L3042"></a><tt class="py-lineno">3042</tt>  <tt class="py-line">    <tt class="py-name">m_G</tt> <tt class="py-op">=</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L3043"></a><tt class="py-lineno">3043</tt>  <tt class="py-line">    <tt class="py-name">s2_B</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">m_G</tt><tt class="py-op">*</tt><tt class="py-name">P</tt> <tt class="py-op">-</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">**</tt><tt class="py-number">2</tt> <tt class="py-op">/</tt> <tt class="py-op">(</tt><tt class="py-name">P</tt><tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">-</tt><tt class="py-name">P</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L3044"></a><tt class="py-lineno">3044</tt>  <tt class="py-line"> </tt>
<a name="L3045"></a><tt class="py-lineno">3045</tt>  <tt class="py-line">    <tt id="link-1017" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-1017', 'k', 'link-99');">k</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">argmax</tt><tt class="py-op">(</tt><tt class="py-name">s2_B</tt><tt class="py-op">)</tt> </tt>
<a name="L3046"></a><tt class="py-lineno">3046</tt>  <tt class="py-line">    <tt class="py-name">T</tt> <tt class="py-op">=</tt> <tt id="link-1018" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1018', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt> <tt id="link-1019" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-1019', 'k', 'link-99');">k</a></tt> <tt class="py-op">]</tt> </tt>
<a name="L3047"></a><tt class="py-lineno">3047</tt>  <tt class="py-line"> </tt>
<a name="L3048"></a><tt class="py-lineno">3048</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">retImg</tt><tt class="py-op">:</tt> </tt>
<a name="L3049"></a><tt class="py-lineno">3049</tt>  <tt class="py-line">        <tt class="py-name">x1</tt> <tt class="py-op">=</tt> <tt id="link-1020" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1020', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt> <tt id="link-1021" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-1021', 'k', 'link-99');">k</a></tt> <tt class="py-op">]</tt> </tt>
<a name="L3050"></a><tt class="py-lineno">3050</tt>  <tt class="py-line">        <tt class="py-name">qq</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ones</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-1022" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1022', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt> <tt id="link-1023" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1023', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt><tt class="py-op">)</tt><tt class="py-comment">#N.select([a&gt;x2,a&gt;x1], [N.ones(a.shape, dtype=N.uint8)])</tt> </tt>
<a name="L3051"></a><tt class="py-lineno">3051</tt>  <tt class="py-line">        <tt class="py-name">qq</tt><tt class="py-op">[</tt><tt class="py-name">a</tt><tt class="py-op">&lt;=</tt><tt class="py-name">T</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt> </tt>
<a name="L3052"></a><tt class="py-lineno">3052</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">qq</tt> </tt>
<a name="L3053"></a><tt class="py-lineno">3053</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">retEM</tt><tt class="py-op">:</tt> </tt>
<a name="L3054"></a><tt class="py-lineno">3054</tt>  <tt class="py-line">        <tt class="py-name">s2_G</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">(</tt><tt id="link-1024" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1024', 'x', 'link-481');">x</a></tt><tt class="py-op">-</tt><tt class="py-name">m_G</tt><tt class="py-op">)</tt><tt class="py-op">**</tt><tt class="py-number">2</tt><tt class="py-op">*</tt><tt class="py-name">p</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3055"></a><tt class="py-lineno">3055</tt>  <tt class="py-line">        <tt class="py-comment">#separability measure:</tt> </tt>
<a name="L3056"></a><tt class="py-lineno">3056</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-name">eta</tt>  <tt class="py-op">=</tt>  <tt class="py-name">s2_B</tt><tt class="py-op">/</tt><tt class="py-name">s2_G</tt> </tt>
<a name="L3057"></a><tt class="py-lineno">3057</tt>  <tt class="py-line"> </tt>
<a name="L3058"></a><tt class="py-lineno">3058</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">T</tt><tt class="py-op">,</tt><tt class="py-name">eta</tt><tt class="py-op">[</tt><tt id="link-1025" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-1025', 'k', 'link-99');">k</a></tt><tt class="py-op">]</tt> </tt>
<a name="L3059"></a><tt class="py-lineno">3059</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3060"></a><tt class="py-lineno">3060</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">T</tt> </tt>
</div><a name="L3061"></a><tt class="py-lineno">3061</tt>  <tt class="py-line"> </tt>
<a name="L3062"></a><tt class="py-lineno">3062</tt>  <tt class="py-line"> </tt>
<a name="calc_threshold_otsu2"></a><div id="calc_threshold_otsu2-def"><a name="L3063"></a><tt class="py-lineno">3063</tt> <a class="py-toggle" href="#" id="calc_threshold_otsu2-toggle" onclick="return toggle('calc_threshold_otsu2');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#calc_threshold_otsu2">calc_threshold_otsu2</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">histYX</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">retEM</tt><tt class="py-op">=</tt><tt id="link-1026" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1026', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">retImg</tt><tt class="py-op">=</tt><tt id="link-1027" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1027', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="calc_threshold_otsu2-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="calc_threshold_otsu2-expanded"><a name="L3064"></a><tt class="py-lineno">3064</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3065"></a><tt class="py-lineno">3065</tt>  <tt class="py-line"><tt class="py-docstring">    calculate multiple (i.e. 2; nT = 2 !!) threshold values</tt> </tt>
<a name="L3066"></a><tt class="py-lineno">3066</tt>  <tt class="py-line"><tt class="py-docstring">    using "Otsu's Method"</tt> </tt>
<a name="L3067"></a><tt class="py-lineno">3067</tt>  <tt class="py-line"><tt class="py-docstring">    described in Ch. 10.3.6 in "Digital Image Processing"</tt> </tt>
<a name="L3068"></a><tt class="py-lineno">3068</tt>  <tt class="py-line"><tt class="py-docstring">    Also ref.: "A Fast Algorithm for Multilevel Thrsholding", Liao, Chen, Chung, 2001</tt> </tt>
<a name="L3069"></a><tt class="py-lineno">3069</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3070"></a><tt class="py-lineno">3070</tt>  <tt class="py-line"><tt class="py-docstring">    ################## old:returns array of nT(=2) thresholds (T1,T2)</tt> </tt>
<a name="L3071"></a><tt class="py-lineno">3071</tt>  <tt class="py-line"><tt class="py-docstring">    returns tuple of T1, T2   (1 for a&gt;T; not &gt;=T)</tt> </tt>
<a name="L3072"></a><tt class="py-lineno">3072</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3073"></a><tt class="py-lineno">3073</tt>  <tt class="py-line"><tt class="py-docstring">    histYX, is the histogram of a -- a tuple(binCount, binPixelValue)</tt> </tt>
<a name="L3074"></a><tt class="py-lineno">3074</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3075"></a><tt class="py-lineno">3075</tt>  <tt class="py-line"><tt class="py-docstring">    if retImg:</tt> </tt>
<a name="L3076"></a><tt class="py-lineno">3076</tt>  <tt class="py-line"><tt class="py-docstring">        returns thresholded image as uint8 </tt> </tt>
<a name="L3077"></a><tt class="py-lineno">3077</tt>  <tt class="py-line"><tt class="py-docstring">    elif retEM: </tt> </tt>
<a name="L3078"></a><tt class="py-lineno">3078</tt>  <tt class="py-line"><tt class="py-docstring">        returns ((T1,T2), eta), where eta is the "segmentation measure" </tt> </tt>
<a name="L3079"></a><tt class="py-lineno">3079</tt>  <tt class="py-line"><tt class="py-docstring">                                 (which might be Matlab's "effectiveness metric")</tt> </tt>
<a name="L3080"></a><tt class="py-lineno">3080</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3081"></a><tt class="py-lineno">3081</tt>  <tt class="py-line"><tt class="py-docstring">    TODO FIXME: this assumes a unique maximum for s2_B; </tt> </tt>
<a name="L3082"></a><tt class="py-lineno">3082</tt>  <tt class="py-line"><tt class="py-docstring">                 otherwise an average of the corresponding T values *should* be returned</tt> </tt>
<a name="L3083"></a><tt class="py-lineno">3083</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3084"></a><tt class="py-lineno">3084</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-1028" class="py-name"><a title="Priithon.fftfuncs" class="py-name" href="#" onclick="return doclink('link-1028', 'fftfuncs', 'link-452');">fftfuncs</a></tt> <tt class="py-keyword">as</tt> <tt class="py-name">F</tt> </tt>
<a name="L3085"></a><tt class="py-lineno">3085</tt>  <tt class="py-line">    <tt class="py-name">nT</tt><tt class="py-op">=</tt><tt class="py-number">2</tt> <tt class="py-comment"># max-search is too slow for nT&gt;= 3</tt> </tt>
<a name="L3086"></a><tt class="py-lineno">3086</tt>  <tt class="py-line"> </tt>
<a name="L3087"></a><tt class="py-lineno">3087</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">histYX</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3088"></a><tt class="py-lineno">3088</tt>  <tt class="py-line">        <tt class="py-name">h</tt><tt class="py-op">,</tt><tt id="link-1029" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1029', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt id="link-1030" class="py-name"><a title="Priithon.useful.histogramYX" class="py-name" href="#" onclick="return doclink('link-1030', 'histogramYX', 'link-600');">histogramYX</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L3089"></a><tt class="py-lineno">3089</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3090"></a><tt class="py-lineno">3090</tt>  <tt class="py-line">        <tt class="py-name">h</tt><tt class="py-op">,</tt><tt id="link-1031" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1031', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt class="py-name">histYX</tt> </tt>
<a name="L3091"></a><tt class="py-lineno">3091</tt>  <tt class="py-line"> </tt>
<a name="L3092"></a><tt class="py-lineno">3092</tt>  <tt class="py-line">    <tt class="py-name">nk</tt> <tt class="py-op">=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">h</tt><tt class="py-op">)</tt> <tt class="py-comment"># number of bins</tt> </tt>
<a name="L3093"></a><tt class="py-lineno">3093</tt>  <tt class="py-line"> </tt>
<a name="L3094"></a><tt class="py-lineno">3094</tt>  <tt class="py-line">    <tt class="py-name">p</tt> <tt class="py-op">=</tt> <tt class="py-name">F</tt><tt class="py-op">.</tt><tt id="link-1032" class="py-name"><a title="Priithon.fftfuncs.zeroArrD" class="py-name" href="#" onclick="return doclink('link-1032', 'zeroArrD', 'link-1015');">zeroArrD</a></tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">h</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L3095"></a><tt class="py-lineno">3095</tt>  <tt class="py-line">    <tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">h</tt> </tt>
<a name="L3096"></a><tt class="py-lineno">3096</tt>  <tt class="py-line">    <tt class="py-name">p</tt><tt class="py-op">/=</tt><tt class="py-name">h</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3097"></a><tt class="py-lineno">3097</tt>  <tt class="py-line"> </tt>
<a name="L3098"></a><tt class="py-lineno">3098</tt>  <tt class="py-line">    <tt class="py-name">P</tt> <tt class="py-op">=</tt> <tt class="py-name">p</tt><tt class="py-op">.</tt><tt class="py-name">cumsum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt>        </tt>
<a name="L3099"></a><tt class="py-lineno">3099</tt>  <tt class="py-line">    <tt class="py-name">m</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt id="link-1033" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1033', 'x', 'link-481');">x</a></tt><tt class="py-op">*</tt><tt class="py-name">p</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">cumsum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt>  </tt>
<a name="L3100"></a><tt class="py-lineno">3100</tt>  <tt class="py-line">    <tt class="py-name">m_G</tt> <tt class="py-op">=</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L3101"></a><tt class="py-lineno">3101</tt>  <tt class="py-line">    <tt class="py-comment">#m_G = (h*x).sum()/h.sum()  # global mean</tt> </tt>
<a name="L3102"></a><tt class="py-lineno">3102</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L3103"></a><tt class="py-lineno">3103</tt>  <tt class="py-line">     </tt>
<a name="L3104"></a><tt class="py-lineno">3104</tt>  <tt class="py-line">    <tt class="py-name">otsu2Img</tt> <tt class="py-op">=</tt> <tt class="py-name">F</tt><tt class="py-op">.</tt><tt id="link-1034" class="py-name" targets="Function Priithon.fftfuncs.zeroArrF()=Priithon.fftfuncs-module.html#zeroArrF"><a title="Priithon.fftfuncs.zeroArrF" class="py-name" href="#" onclick="return doclink('link-1034', 'zeroArrF', 'link-1034');">zeroArrF</a></tt><tt class="py-op">(</tt><tt class="py-name">nk</tt><tt class="py-op">,</tt> <tt class="py-name">nk</tt><tt class="py-op">)</tt> </tt>
<a name="L3105"></a><tt class="py-lineno">3105</tt>  <tt class="py-line"> </tt>
<a name="L3106"></a><tt class="py-lineno">3106</tt>  <tt class="py-line">    <tt class="py-name">M</tt> <tt class="py-op">=</tt> <tt class="py-name">nT</tt> <tt class="py-op">+</tt> <tt class="py-number">1</tt> <tt class="py-comment"># number of classes</tt> </tt>
<a name="L3107"></a><tt class="py-lineno">3107</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">Tk1</tt> <tt class="py-keyword">in</tt> <tt id="link-1035" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1035', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-name">nk</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> <tt class="py-comment"># leave room for 2 values, i.e  another threshold, at the top</tt> </tt>
<a name="L3108"></a><tt class="py-lineno">3108</tt>  <tt class="py-line">        <tt class="py-name">omeg_1</tt> <tt class="py-op">=</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt> </tt>
<a name="L3109"></a><tt class="py-lineno">3109</tt>  <tt class="py-line">        <tt class="py-name">mu_1</tt>   <tt class="py-op">=</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_1</tt> </tt>
<a name="L3110"></a><tt class="py-lineno">3110</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">Tk2</tt> <tt class="py-keyword">in</tt> <tt id="link-1036" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1036', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">Tk1</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">nk</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3111"></a><tt class="py-lineno">3111</tt>  <tt class="py-line">            <tt class="py-name">omeg_2</tt> <tt class="py-op">=</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">omeg_1</tt> </tt>
<a name="L3112"></a><tt class="py-lineno">3112</tt>  <tt class="py-line">            <tt class="py-name">omeg_3</tt> <tt class="py-op">=</tt> <tt class="py-number">1.</tt> <tt class="py-op">-</tt>  <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> </tt>
<a name="L3113"></a><tt class="py-lineno">3113</tt>  <tt class="py-line"> </tt>
<a name="L3114"></a><tt class="py-lineno">3114</tt>  <tt class="py-line">            <tt class="py-name">mu_2</tt>   <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_2</tt> </tt>
<a name="L3115"></a><tt class="py-lineno">3115</tt>  <tt class="py-line">            <tt class="py-name">mu_3</tt>   <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">-</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_3</tt> </tt>
<a name="L3116"></a><tt class="py-lineno">3116</tt>  <tt class="py-line"> </tt>
<a name="L3117"></a><tt class="py-lineno">3117</tt>  <tt class="py-line">            <tt class="py-name">otsu2Img</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">,</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> \ </tt>
<a name="L3118"></a><tt class="py-lineno">3118</tt>  <tt class="py-line">                 <tt class="py-name">omeg_1</tt><tt class="py-op">*</tt><tt class="py-name">mu_1</tt><tt class="py-op">*</tt><tt class="py-name">mu_1</tt> <tt class="py-op">+</tt>\ </tt>
<a name="L3119"></a><tt class="py-lineno">3119</tt>  <tt class="py-line">                 <tt class="py-name">omeg_2</tt><tt class="py-op">*</tt><tt class="py-name">mu_2</tt><tt class="py-op">*</tt><tt class="py-name">mu_2</tt> <tt class="py-op">+</tt>\ </tt>
<a name="L3120"></a><tt class="py-lineno">3120</tt>  <tt class="py-line">                 <tt class="py-name">omeg_3</tt><tt class="py-op">*</tt><tt class="py-name">mu_3</tt><tt class="py-op">*</tt><tt class="py-name">mu_3</tt> </tt>
<a name="L3121"></a><tt class="py-lineno">3121</tt>  <tt class="py-line">             </tt>
<a name="L3122"></a><tt class="py-lineno">3122</tt>  <tt class="py-line">    <tt class="py-comment">#return otsu2Img</tt> </tt>
<a name="L3123"></a><tt class="py-lineno">3123</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">s2_B__prime</tt><tt class="py-op">,</tt> <tt class="py-name">_</tt><tt class="py-op">,</tt> <tt class="py-name">Tk1</tt><tt class="py-op">,</tt> <tt class="py-name">Tk2</tt> <tt class="py-op">=</tt> <tt id="link-1037" class="py-name"><a title="Priithon.useful.findMax" class="py-name" href="#" onclick="return doclink('link-1037', 'findMax', 'link-189');">findMax</a></tt><tt class="py-op">(</tt><tt class="py-name">otsu2Img</tt><tt class="py-op">)</tt> </tt>
<a name="L3124"></a><tt class="py-lineno">3124</tt>  <tt class="py-line"> </tt>
<a name="L3125"></a><tt class="py-lineno">3125</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">retImg</tt><tt class="py-op">:</tt> </tt>
<a name="L3126"></a><tt class="py-lineno">3126</tt>  <tt class="py-line">        <tt class="py-name">x1</tt><tt class="py-op">,</tt><tt class="py-name">x2</tt> <tt class="py-op">=</tt> <tt id="link-1038" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1038', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-1039" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1039', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> </tt>
<a name="L3127"></a><tt class="py-lineno">3127</tt>  <tt class="py-line">        <tt class="py-name">qq</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">select</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-name">a</tt><tt class="py-op">&gt;</tt><tt class="py-name">x2</tt><tt class="py-op">,</tt><tt class="py-name">a</tt><tt class="py-op">&gt;</tt><tt class="py-name">x1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ones</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-1040" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1040', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt> <tt id="link-1041" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1041', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt><tt class="py-op">)</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L3128"></a><tt class="py-lineno">3128</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">qq</tt> </tt>
<a name="L3129"></a><tt class="py-lineno">3129</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">retEM</tt><tt class="py-op">:</tt> </tt>
<a name="L3130"></a><tt class="py-lineno">3130</tt>  <tt class="py-line">        <tt class="py-name">omeg_1</tt> <tt class="py-op">=</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt> </tt>
<a name="L3131"></a><tt class="py-lineno">3131</tt>  <tt class="py-line">        <tt class="py-name">mu_1</tt>   <tt class="py-op">=</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_1</tt> </tt>
<a name="L3132"></a><tt class="py-lineno">3132</tt>  <tt class="py-line">        <tt class="py-name">omeg_2</tt> <tt class="py-op">=</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">omeg_1</tt> </tt>
<a name="L3133"></a><tt class="py-lineno">3133</tt>  <tt class="py-line">        <tt class="py-name">omeg_3</tt> <tt class="py-op">=</tt> <tt class="py-number">1.</tt> <tt class="py-op">-</tt>  <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> </tt>
<a name="L3134"></a><tt class="py-lineno">3134</tt>  <tt class="py-line">        <tt class="py-name">mu_2</tt>   <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_2</tt> </tt>
<a name="L3135"></a><tt class="py-lineno">3135</tt>  <tt class="py-line">        <tt class="py-name">mu_3</tt>   <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">-</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_3</tt> </tt>
<a name="L3136"></a><tt class="py-lineno">3136</tt>  <tt class="py-line"> </tt>
<a name="L3137"></a><tt class="py-lineno">3137</tt>  <tt class="py-line">        <tt class="py-name">mu_T</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">omeg_1</tt><tt class="py-op">*</tt><tt class="py-name">mu_1</tt> <tt class="py-op">+</tt> <tt class="py-name">omeg_2</tt><tt class="py-op">*</tt><tt class="py-name">mu_2</tt> <tt class="py-op">+</tt> <tt class="py-name">omeg_3</tt><tt class="py-op">*</tt><tt class="py-name">mu_3</tt><tt class="py-op">)</tt> </tt>
<a name="L3138"></a><tt class="py-lineno">3138</tt>  <tt class="py-line">        <tt class="py-name">s2_B</tt> <tt class="py-op">=</tt> <tt class="py-name">s2_B__prime</tt> <tt class="py-op">-</tt> <tt class="py-name">mu_T</tt> <tt class="py-op">*</tt> <tt class="py-name">mu_T</tt> </tt>
<a name="L3139"></a><tt class="py-lineno">3139</tt>  <tt class="py-line"> </tt>
<a name="L3140"></a><tt class="py-lineno">3140</tt>  <tt class="py-line">        <tt class="py-name">s2_G</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">(</tt><tt id="link-1042" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1042', 'x', 'link-481');">x</a></tt><tt class="py-op">-</tt><tt class="py-name">m_G</tt><tt class="py-op">)</tt><tt class="py-op">**</tt><tt class="py-number">2</tt><tt class="py-op">*</tt><tt class="py-name">p</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3141"></a><tt class="py-lineno">3141</tt>  <tt class="py-line">        <tt class="py-name">eta</tt> <tt class="py-op">=</tt> <tt class="py-name">s2_B</tt> <tt class="py-op">/</tt> <tt class="py-name">s2_G</tt> </tt>
<a name="L3142"></a><tt class="py-lineno">3142</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt id="link-1043" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1043', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-1044" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1044', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">eta</tt> </tt>
<a name="L3143"></a><tt class="py-lineno">3143</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3144"></a><tt class="py-lineno">3144</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt id="link-1045" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1045', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-1046" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1046', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L3145"></a><tt class="py-lineno">3145</tt>  <tt class="py-line"> </tt>
<a name="L3146"></a><tt class="py-lineno">3146</tt>  <tt class="py-line">    <tt class="py-string">'''</tt> </tt>
<a name="L3147"></a><tt class="py-lineno">3147</tt>  <tt class="py-line"><tt class="py-string">    K = nT + 1 # number of classes</tt> </tt>
<a name="L3148"></a><tt class="py-lineno">3148</tt>  <tt class="py-line"><tt class="py-string">    #T=N.arange(0,K+1, dtype=N.float64)</tt> </tt>
<a name="L3149"></a><tt class="py-lineno">3149</tt>  <tt class="py-line"><tt class="py-string">    #T[0]  = x[0] -1 # lower bound is fixed to min-1</tt> </tt>
<a name="L3150"></a><tt class="py-lineno">3150</tt>  <tt class="py-line"><tt class="py-string">    #T[K]  = x[-1]+1 # upper bound is fixed to max+1</tt> </tt>
<a name="L3151"></a><tt class="py-lineno">3151</tt>  <tt class="py-line"><tt class="py-string">    Tk=N.arange(0,K+1, dtype=N.int) # theshold in units of "bin number"</tt> </tt>
<a name="L3152"></a><tt class="py-lineno">3152</tt>  <tt class="py-line"><tt class="py-string">    Tk[0]  = -1 # lower bound is fixed to min-1</tt> </tt>
<a name="L3153"></a><tt class="py-lineno">3153</tt>  <tt class="py-line"><tt class="py-string">    Tk[K]  = nk # upper bound is fixed to max+1</tt> </tt>
<a name="L3154"></a><tt class="py-lineno">3154</tt>  <tt class="py-line"><tt class="py-string">    </tt> </tt>
<a name="L3155"></a><tt class="py-lineno">3155</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3156"></a><tt class="py-lineno">3156</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3157"></a><tt class="py-lineno">3157</tt>  <tt class="py-line"><tt class="py-string">    P  = F.zeroArrD(K)</tt> </tt>
<a name="L3158"></a><tt class="py-lineno">3158</tt>  <tt class="py-line"><tt class="py-string">    m  = F.zeroArrD(K)</tt> </tt>
<a name="L3159"></a><tt class="py-lineno">3159</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3160"></a><tt class="py-lineno">3160</tt>  <tt class="py-line"><tt class="py-string">    otsu2Img = F.zeroArrF(len(h), len(h))</tt> </tt>
<a name="L3161"></a><tt class="py-lineno">3161</tt>  <tt class="py-line"><tt class="py-string">    for Tk1 in range(1,nk-2): # leave room for 2 values, i.e  another threshold, at the top</tt> </tt>
<a name="L3162"></a><tt class="py-lineno">3162</tt>  <tt class="py-line"><tt class="py-string">        for Tk2 in range(Tk1+1, nk-1):</tt> </tt>
<a name="L3163"></a><tt class="py-lineno">3163</tt>  <tt class="py-line"><tt class="py-string">            # . x[N.where((x&gt;T1) &amp; (x&lt;x[-1]))]:</tt> </tt>
<a name="L3164"></a><tt class="py-lineno">3164</tt>  <tt class="py-line"><tt class="py-string">            Tk[1] = Tk1</tt> </tt>
<a name="L3165"></a><tt class="py-lineno">3165</tt>  <tt class="py-line"><tt class="py-string">            Tk[2] = Tk2</tt> </tt>
<a name="L3166"></a><tt class="py-lineno">3166</tt>  <tt class="py-line"><tt class="py-string">    </tt> </tt>
<a name="L3167"></a><tt class="py-lineno">3167</tt>  <tt class="py-line"><tt class="py-string"> #             N.where((x&gt;T[i]) &amp; (x&lt;=T[i+1]))</tt> </tt>
<a name="L3168"></a><tt class="py-lineno">3168</tt>  <tt class="py-line"><tt class="py-string">            ix =  [  N.arange(Tk[i]+1, Tk[i+1])            for i in range(K) ]</tt> </tt>
<a name="L3169"></a><tt class="py-lineno">3169</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3170"></a><tt class="py-lineno">3170</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3171"></a><tt class="py-lineno">3171</tt>  <tt class="py-line"><tt class="py-string">            for i in range(K):</tt> </tt>
<a name="L3172"></a><tt class="py-lineno">3172</tt>  <tt class="py-line"><tt class="py-string">                P [i] =  p[ix[i]].sum()</tt> </tt>
<a name="L3173"></a><tt class="py-lineno">3173</tt>  <tt class="py-line"><tt class="py-string">                m [i] =  (p[ix[i]]*x[ix[i]]).sum() / P[i]</tt> </tt>
<a name="L3174"></a><tt class="py-lineno">3174</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3175"></a><tt class="py-lineno">3175</tt>  <tt class="py-line"><tt class="py-string">            s2_B = (P[i]*(m[i]-m_G)**2).sum()</tt> </tt>
<a name="L3176"></a><tt class="py-lineno">3176</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3177"></a><tt class="py-lineno">3177</tt>  <tt class="py-line"><tt class="py-string">            otsu2Img[Tk1,Tk2] = s2_B</tt> </tt>
<a name="L3178"></a><tt class="py-lineno">3178</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3179"></a><tt class="py-lineno">3179</tt>  <tt class="py-line"><tt class="py-string">    #s2_G = ((x-m_G)**2*p).sum()</tt> </tt>
<a name="L3180"></a><tt class="py-lineno">3180</tt>  <tt class="py-line"><tt class="py-string">    #separability measure:</tt> </tt>
<a name="L3181"></a><tt class="py-lineno">3181</tt>  <tt class="py-line"><tt class="py-string">    #eta  =  s2_B/s2_G</tt> </tt>
<a name="L3182"></a><tt class="py-lineno">3182</tt>  <tt class="py-line"><tt class="py-string">    #eta[T]</tt> </tt>
<a name="L3183"></a><tt class="py-lineno">3183</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3184"></a><tt class="py-lineno">3184</tt>  <tt class="py-line"><tt class="py-string">    return otsu2Img</tt> </tt>
<a name="L3185"></a><tt class="py-lineno">3185</tt>  <tt class="py-line"><tt class="py-string">    '''</tt> </tt>
</div><a name="L3186"></a><tt class="py-lineno">3186</tt>  <tt class="py-line">     </tt>
<a name="L3187"></a><tt class="py-lineno">3187</tt>  <tt class="py-line">     </tt>
<a name="L3188"></a><tt class="py-lineno">3188</tt>  <tt class="py-line"> </tt>
<a name="calc_threshold_otsu3"></a><div id="calc_threshold_otsu3-def"><a name="L3189"></a><tt class="py-lineno">3189</tt> <a class="py-toggle" href="#" id="calc_threshold_otsu3-toggle" onclick="return toggle('calc_threshold_otsu3');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#calc_threshold_otsu3">calc_threshold_otsu3</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">histYX</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">retEM</tt><tt class="py-op">=</tt><tt id="link-1047" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1047', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">retImg</tt><tt class="py-op">=</tt><tt id="link-1048" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1048', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="calc_threshold_otsu3-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="calc_threshold_otsu3-expanded"><a name="L3190"></a><tt class="py-lineno">3190</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3191"></a><tt class="py-lineno">3191</tt>  <tt class="py-line"><tt class="py-docstring">    calculate 3 threshold values using "Otsu's Method"</tt> </tt>
<a name="L3192"></a><tt class="py-lineno">3192</tt>  <tt class="py-line"><tt class="py-docstring">    described in Ch. 10.3.6 in "Digital Image Processing"</tt> </tt>
<a name="L3193"></a><tt class="py-lineno">3193</tt>  <tt class="py-line"><tt class="py-docstring">    Also ref.: "A Fast Algorithm for Multilevel Thrsholding", Liao, Chen, Chung, 2001</tt> </tt>
<a name="L3194"></a><tt class="py-lineno">3194</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3195"></a><tt class="py-lineno">3195</tt>  <tt class="py-line"><tt class="py-docstring">    returns tuple of T1, T2, T3 (1 for a&gt;T; not &gt;=T)</tt> </tt>
<a name="L3196"></a><tt class="py-lineno">3196</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3197"></a><tt class="py-lineno">3197</tt>  <tt class="py-line"><tt class="py-docstring">    histYX, is the histogram of a -- a tuple(binCount, binPixelValue)</tt> </tt>
<a name="L3198"></a><tt class="py-lineno">3198</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3199"></a><tt class="py-lineno">3199</tt>  <tt class="py-line"><tt class="py-docstring">    if retImg:</tt> </tt>
<a name="L3200"></a><tt class="py-lineno">3200</tt>  <tt class="py-line"><tt class="py-docstring">        returns thresholded image as uint8 </tt> </tt>
<a name="L3201"></a><tt class="py-lineno">3201</tt>  <tt class="py-line"><tt class="py-docstring">    elif retEM: </tt> </tt>
<a name="L3202"></a><tt class="py-lineno">3202</tt>  <tt class="py-line"><tt class="py-docstring">        returns ((T1,T2,T3), eta), where eta is the "segmentation measure" </tt> </tt>
<a name="L3203"></a><tt class="py-lineno">3203</tt>  <tt class="py-line"><tt class="py-docstring">                           (which might be Matlab's "effectiveness metric")</tt> </tt>
<a name="L3204"></a><tt class="py-lineno">3204</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3205"></a><tt class="py-lineno">3205</tt>  <tt class="py-line"><tt class="py-docstring">    TODO FIXME: this assumes a unique maximum for s2_B; </tt> </tt>
<a name="L3206"></a><tt class="py-lineno">3206</tt>  <tt class="py-line"><tt class="py-docstring">                 otherwise an average of the corresponding T values *should* be returned</tt> </tt>
<a name="L3207"></a><tt class="py-lineno">3207</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3208"></a><tt class="py-lineno">3208</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-op">.</tt> <tt class="py-keyword">import</tt> <tt id="link-1049" class="py-name"><a title="Priithon.fftfuncs" class="py-name" href="#" onclick="return doclink('link-1049', 'fftfuncs', 'link-452');">fftfuncs</a></tt> <tt class="py-keyword">as</tt> <tt class="py-name">F</tt> </tt>
<a name="L3209"></a><tt class="py-lineno">3209</tt>  <tt class="py-line">    <tt class="py-name">nT</tt><tt class="py-op">=</tt><tt class="py-number">3</tt> </tt>
<a name="L3210"></a><tt class="py-lineno">3210</tt>  <tt class="py-line"> </tt>
<a name="L3211"></a><tt class="py-lineno">3211</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">histYX</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3212"></a><tt class="py-lineno">3212</tt>  <tt class="py-line">        <tt class="py-name">h</tt><tt class="py-op">,</tt><tt id="link-1050" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1050', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt id="link-1051" class="py-name"><a title="Priithon.useful.histogramYX" class="py-name" href="#" onclick="return doclink('link-1051', 'histogramYX', 'link-600');">histogramYX</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L3213"></a><tt class="py-lineno">3213</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3214"></a><tt class="py-lineno">3214</tt>  <tt class="py-line">        <tt class="py-name">h</tt><tt class="py-op">,</tt><tt id="link-1052" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1052', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt class="py-name">histYX</tt> </tt>
<a name="L3215"></a><tt class="py-lineno">3215</tt>  <tt class="py-line"> </tt>
<a name="L3216"></a><tt class="py-lineno">3216</tt>  <tt class="py-line">    <tt class="py-name">nk</tt> <tt class="py-op">=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">h</tt><tt class="py-op">)</tt> <tt class="py-comment"># number of bins</tt> </tt>
<a name="L3217"></a><tt class="py-lineno">3217</tt>  <tt class="py-line"> </tt>
<a name="L3218"></a><tt class="py-lineno">3218</tt>  <tt class="py-line">    <tt class="py-name">p</tt> <tt class="py-op">=</tt> <tt class="py-name">F</tt><tt class="py-op">.</tt><tt id="link-1053" class="py-name"><a title="Priithon.fftfuncs.zeroArrD" class="py-name" href="#" onclick="return doclink('link-1053', 'zeroArrD', 'link-1015');">zeroArrD</a></tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">h</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L3219"></a><tt class="py-lineno">3219</tt>  <tt class="py-line">    <tt class="py-name">p</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">h</tt> </tt>
<a name="L3220"></a><tt class="py-lineno">3220</tt>  <tt class="py-line">    <tt class="py-name">p</tt><tt class="py-op">/=</tt><tt class="py-name">h</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3221"></a><tt class="py-lineno">3221</tt>  <tt class="py-line"> </tt>
<a name="L3222"></a><tt class="py-lineno">3222</tt>  <tt class="py-line">    <tt class="py-name">P</tt> <tt class="py-op">=</tt> <tt class="py-name">p</tt><tt class="py-op">.</tt><tt class="py-name">cumsum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt>        </tt>
<a name="L3223"></a><tt class="py-lineno">3223</tt>  <tt class="py-line">    <tt class="py-name">m</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt id="link-1054" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1054', 'x', 'link-481');">x</a></tt><tt class="py-op">*</tt><tt class="py-name">p</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">cumsum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt>  </tt>
<a name="L3224"></a><tt class="py-lineno">3224</tt>  <tt class="py-line">    <tt class="py-name">m_G</tt> <tt class="py-op">=</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L3225"></a><tt class="py-lineno">3225</tt>  <tt class="py-line">    <tt class="py-comment">#m_G = (h*x).sum()/h.sum()  # global mean</tt> </tt>
<a name="L3226"></a><tt class="py-lineno">3226</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L3227"></a><tt class="py-lineno">3227</tt>  <tt class="py-line">     </tt>
<a name="L3228"></a><tt class="py-lineno">3228</tt>  <tt class="py-line">    <tt class="py-name">otsu2Img</tt> <tt class="py-op">=</tt> <tt class="py-name">F</tt><tt class="py-op">.</tt><tt id="link-1055" class="py-name"><a title="Priithon.fftfuncs.zeroArrF" class="py-name" href="#" onclick="return doclink('link-1055', 'zeroArrF', 'link-1034');">zeroArrF</a></tt><tt class="py-op">(</tt><tt class="py-name">nk</tt><tt class="py-op">,</tt> <tt class="py-name">nk</tt><tt class="py-op">,</tt> <tt class="py-name">nk</tt><tt class="py-op">)</tt> </tt>
<a name="L3229"></a><tt class="py-lineno">3229</tt>  <tt class="py-line">     </tt>
<a name="L3230"></a><tt class="py-lineno">3230</tt>  <tt class="py-line">    <tt class="py-name">M</tt> <tt class="py-op">=</tt> <tt class="py-name">nT</tt> <tt class="py-op">+</tt> <tt class="py-number">1</tt> <tt class="py-comment"># number of classes</tt> </tt>
<a name="L3231"></a><tt class="py-lineno">3231</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">Tk1</tt> <tt class="py-keyword">in</tt> <tt id="link-1056" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1056', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-name">nk</tt><tt class="py-op">-</tt><tt class="py-name">nT</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> <tt class="py-comment"># leave room for nT values, i.e  another threshold, at the top</tt> </tt>
<a name="L3232"></a><tt class="py-lineno">3232</tt>  <tt class="py-line">        <tt class="py-name">omeg_1</tt> <tt class="py-op">=</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt> </tt>
<a name="L3233"></a><tt class="py-lineno">3233</tt>  <tt class="py-line">        <tt class="py-name">mu_1</tt>   <tt class="py-op">=</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_1</tt> </tt>
<a name="L3234"></a><tt class="py-lineno">3234</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">Tk2</tt> <tt class="py-keyword">in</tt> <tt id="link-1057" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1057', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">Tk1</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">nk</tt><tt class="py-op">-</tt><tt class="py-number">3</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3235"></a><tt class="py-lineno">3235</tt>  <tt class="py-line">            <tt class="py-name">omeg_2</tt> <tt class="py-op">=</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">omeg_1</tt> </tt>
<a name="L3236"></a><tt class="py-lineno">3236</tt>  <tt class="py-line">            <tt class="py-name">mu_2</tt>   <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_2</tt> </tt>
<a name="L3237"></a><tt class="py-lineno">3237</tt>  <tt class="py-line"> </tt>
<a name="L3238"></a><tt class="py-lineno">3238</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt class="py-name">Tk3</tt> <tt class="py-keyword">in</tt> <tt id="link-1058" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1058', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">Tk2</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">nk</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3239"></a><tt class="py-lineno">3239</tt>  <tt class="py-line">                <tt class="py-name">omeg_3</tt> <tt class="py-op">=</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk3</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> </tt>
<a name="L3240"></a><tt class="py-lineno">3240</tt>  <tt class="py-line">                <tt class="py-name">mu_3</tt>   <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk3</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_3</tt> </tt>
<a name="L3241"></a><tt class="py-lineno">3241</tt>  <tt class="py-line"> </tt>
<a name="L3242"></a><tt class="py-lineno">3242</tt>  <tt class="py-line">                <tt class="py-name">omeg_4</tt> <tt class="py-op">=</tt> <tt class="py-number">1.</tt> <tt class="py-op">-</tt>  <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk3</tt><tt class="py-op">]</tt> </tt>
<a name="L3243"></a><tt class="py-lineno">3243</tt>  <tt class="py-line">                <tt class="py-name">mu_4</tt>   <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">-</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk3</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_4</tt> </tt>
<a name="L3244"></a><tt class="py-lineno">3244</tt>  <tt class="py-line"> </tt>
<a name="L3245"></a><tt class="py-lineno">3245</tt>  <tt class="py-line">                <tt class="py-name">otsu2Img</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">,</tt><tt class="py-name">Tk2</tt><tt class="py-op">,</tt><tt class="py-name">Tk3</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> \ </tt>
<a name="L3246"></a><tt class="py-lineno">3246</tt>  <tt class="py-line">                     <tt class="py-name">omeg_1</tt><tt class="py-op">*</tt><tt class="py-name">mu_1</tt><tt class="py-op">*</tt><tt class="py-name">mu_1</tt> <tt class="py-op">+</tt>\ </tt>
<a name="L3247"></a><tt class="py-lineno">3247</tt>  <tt class="py-line">                     <tt class="py-name">omeg_2</tt><tt class="py-op">*</tt><tt class="py-name">mu_2</tt><tt class="py-op">*</tt><tt class="py-name">mu_2</tt> <tt class="py-op">+</tt>\ </tt>
<a name="L3248"></a><tt class="py-lineno">3248</tt>  <tt class="py-line">                     <tt class="py-name">omeg_3</tt><tt class="py-op">*</tt><tt class="py-name">mu_3</tt><tt class="py-op">*</tt><tt class="py-name">mu_3</tt> <tt class="py-op">+</tt>\ </tt>
<a name="L3249"></a><tt class="py-lineno">3249</tt>  <tt class="py-line">                     <tt class="py-name">omeg_4</tt><tt class="py-op">*</tt><tt class="py-name">mu_4</tt><tt class="py-op">*</tt><tt class="py-name">mu_4</tt> </tt>
<a name="L3250"></a><tt class="py-lineno">3250</tt>  <tt class="py-line">             </tt>
<a name="L3251"></a><tt class="py-lineno">3251</tt>  <tt class="py-line">    <tt class="py-comment">#return otsu2Img</tt> </tt>
<a name="L3252"></a><tt class="py-lineno">3252</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">s2_B__prime</tt><tt class="py-op">,</tt> <tt class="py-name">Tk1</tt><tt class="py-op">,</tt> <tt class="py-name">Tk2</tt><tt class="py-op">,</tt> <tt class="py-name">Tk3</tt> <tt class="py-op">=</tt> <tt id="link-1059" class="py-name"><a title="Priithon.useful.findMax" class="py-name" href="#" onclick="return doclink('link-1059', 'findMax', 'link-189');">findMax</a></tt><tt class="py-op">(</tt><tt class="py-name">otsu2Img</tt><tt class="py-op">)</tt> </tt>
<a name="L3253"></a><tt class="py-lineno">3253</tt>  <tt class="py-line">    <tt class="py-name">x1</tt><tt class="py-op">,</tt><tt class="py-name">x2</tt><tt class="py-op">,</tt><tt class="py-name">x3</tt> <tt class="py-op">=</tt> <tt id="link-1060" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1060', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-1061" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1061', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt id="link-1062" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1062', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">Tk3</tt><tt class="py-op">]</tt> </tt>
<a name="L3254"></a><tt class="py-lineno">3254</tt>  <tt class="py-line"> </tt>
<a name="L3255"></a><tt class="py-lineno">3255</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">retImg</tt><tt class="py-op">:</tt> </tt>
<a name="L3256"></a><tt class="py-lineno">3256</tt>  <tt class="py-line">        <tt class="py-name">qq</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">select</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-name">a</tt><tt class="py-op">&gt;</tt><tt class="py-name">x3</tt><tt class="py-op">,</tt><tt class="py-name">a</tt><tt class="py-op">&gt;</tt><tt class="py-name">x2</tt><tt class="py-op">,</tt><tt class="py-name">a</tt><tt class="py-op">&gt;</tt><tt class="py-name">x1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-op">[</tt><tt class="py-number">3</tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">,</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ones</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-1063" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1063', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt> <tt id="link-1064" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1064', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">uint8</tt><tt class="py-op">)</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L3257"></a><tt class="py-lineno">3257</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">qq</tt> </tt>
<a name="L3258"></a><tt class="py-lineno">3258</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">retEM</tt><tt class="py-op">:</tt> </tt>
<a name="L3259"></a><tt class="py-lineno">3259</tt>  <tt class="py-line">        <tt class="py-name">omeg_1</tt> <tt class="py-op">=</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt> </tt>
<a name="L3260"></a><tt class="py-lineno">3260</tt>  <tt class="py-line">        <tt class="py-name">mu_1</tt>   <tt class="py-op">=</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_1</tt> </tt>
<a name="L3261"></a><tt class="py-lineno">3261</tt>  <tt class="py-line"> </tt>
<a name="L3262"></a><tt class="py-lineno">3262</tt>  <tt class="py-line">        <tt class="py-name">omeg_2</tt> <tt class="py-op">=</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">omeg_1</tt> </tt>
<a name="L3263"></a><tt class="py-lineno">3263</tt>  <tt class="py-line">        <tt class="py-name">mu_2</tt>   <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_2</tt> </tt>
<a name="L3264"></a><tt class="py-lineno">3264</tt>  <tt class="py-line"> </tt>
<a name="L3265"></a><tt class="py-lineno">3265</tt>  <tt class="py-line">        <tt class="py-name">omeg_3</tt> <tt class="py-op">=</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk3</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt> </tt>
<a name="L3266"></a><tt class="py-lineno">3266</tt>  <tt class="py-line">        <tt class="py-name">mu_3</tt>   <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk3</tt><tt class="py-op">]</tt> <tt class="py-op">-</tt> <tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_3</tt> </tt>
<a name="L3267"></a><tt class="py-lineno">3267</tt>  <tt class="py-line"> </tt>
<a name="L3268"></a><tt class="py-lineno">3268</tt>  <tt class="py-line">        <tt class="py-name">omeg_4</tt> <tt class="py-op">=</tt> <tt class="py-number">1.</tt> <tt class="py-op">-</tt>  <tt class="py-name">P</tt><tt class="py-op">[</tt><tt class="py-name">Tk3</tt><tt class="py-op">]</tt> </tt>
<a name="L3269"></a><tt class="py-lineno">3269</tt>  <tt class="py-line">        <tt class="py-name">mu_4</tt>   <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">-</tt><tt class="py-name">m</tt><tt class="py-op">[</tt><tt class="py-name">Tk3</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">/</tt> <tt class="py-name">omeg_4</tt> </tt>
<a name="L3270"></a><tt class="py-lineno">3270</tt>  <tt class="py-line"> </tt>
<a name="L3271"></a><tt class="py-lineno">3271</tt>  <tt class="py-line">        <tt class="py-name">mu_T</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-name">omeg_1</tt><tt class="py-op">*</tt><tt class="py-name">mu_1</tt> <tt class="py-op">+</tt> <tt class="py-name">omeg_2</tt><tt class="py-op">*</tt><tt class="py-name">mu_2</tt> <tt class="py-op">+</tt> <tt class="py-name">omeg_3</tt><tt class="py-op">*</tt><tt class="py-name">mu_3</tt> <tt class="py-op">+</tt> <tt class="py-name">omeg_4</tt><tt class="py-op">*</tt><tt class="py-name">mu_4</tt><tt class="py-op">)</tt> </tt>
<a name="L3272"></a><tt class="py-lineno">3272</tt>  <tt class="py-line">        <tt class="py-name">s2_B</tt> <tt class="py-op">=</tt> <tt class="py-name">s2_B__prime</tt> <tt class="py-op">-</tt> <tt class="py-name">mu_T</tt> <tt class="py-op">*</tt> <tt class="py-name">mu_T</tt> </tt>
<a name="L3273"></a><tt class="py-lineno">3273</tt>  <tt class="py-line"> </tt>
<a name="L3274"></a><tt class="py-lineno">3274</tt>  <tt class="py-line">        <tt class="py-name">s2_G</tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt class="py-op">(</tt><tt id="link-1065" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1065', 'x', 'link-481');">x</a></tt><tt class="py-op">-</tt><tt class="py-name">m_G</tt><tt class="py-op">)</tt><tt class="py-op">**</tt><tt class="py-number">2</tt><tt class="py-op">*</tt><tt class="py-name">p</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3275"></a><tt class="py-lineno">3275</tt>  <tt class="py-line">        <tt class="py-name">eta</tt> <tt class="py-op">=</tt> <tt class="py-name">s2_B</tt> <tt class="py-op">/</tt> <tt class="py-name">s2_G</tt> </tt>
<a name="L3276"></a><tt class="py-lineno">3276</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">x1</tt><tt class="py-op">,</tt><tt class="py-name">x2</tt><tt class="py-op">,</tt><tt class="py-name">x3</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">eta</tt> </tt>
<a name="L3277"></a><tt class="py-lineno">3277</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3278"></a><tt class="py-lineno">3278</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">x1</tt><tt class="py-op">,</tt><tt class="py-name">x2</tt><tt class="py-op">,</tt><tt class="py-name">x3</tt><tt class="py-op">)</tt> </tt>
</div><a name="L3279"></a><tt class="py-lineno">3279</tt>  <tt class="py-line"> </tt>
<a name="L3280"></a><tt class="py-lineno">3280</tt>  <tt class="py-line"> </tt>
<a name="L3281"></a><tt class="py-lineno">3281</tt>  <tt class="py-line"><tt class="py-comment">###############################################################</tt> </tt>
<a name="L3282"></a><tt class="py-lineno">3282</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">###############################################################</tt> </tt>
<a name="L3283"></a><tt class="py-lineno">3283</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L3284"></a><tt class="py-lineno">3284</tt>  <tt class="py-line"><tt class="py-comment">#adapted from numpy's numeric.py</tt> </tt>
<a name="L3285"></a><tt class="py-lineno">3285</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="_getconv"></a><div id="_getconv-def"><a name="L3286"></a><tt class="py-lineno">3286</tt> <a class="py-toggle" href="#" id="_getconv-toggle" onclick="return toggle('_getconv');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_getconv">_getconv</a><tt class="py-op">(</tt><tt class="py-param">dtype</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_getconv-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_getconv-expanded"><a name="L3287"></a><tt class="py-lineno">3287</tt>  <tt class="py-line">    <tt class="py-name">typ</tt> <tt class="py-op">=</tt> <tt id="link-1066" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1066', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">type</tt> </tt>
<a name="L3288"></a><tt class="py-lineno">3288</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">issubclass</tt><tt class="py-op">(</tt><tt class="py-name">typ</tt><tt class="py-op">,</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">bool_</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3289"></a><tt class="py-lineno">3289</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-keyword">lambda</tt> <tt id="link-1067" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1067', 'x', 'link-481');">x</a></tt><tt class="py-op">:</tt> <tt class="py-name">bool</tt><tt class="py-op">(</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt id="link-1068" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1068', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L3290"></a><tt class="py-lineno">3290</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">issubclass</tt><tt class="py-op">(</tt><tt class="py-name">typ</tt><tt class="py-op">,</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">integer</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3291"></a><tt class="py-lineno">3291</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">int</tt> </tt>
<a name="L3292"></a><tt class="py-lineno">3292</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">issubclass</tt><tt class="py-op">(</tt><tt class="py-name">typ</tt><tt class="py-op">,</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">floating</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3293"></a><tt class="py-lineno">3293</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">float</tt> </tt>
<a name="L3294"></a><tt class="py-lineno">3294</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">issubclass</tt><tt class="py-op">(</tt><tt class="py-name">typ</tt><tt class="py-op">,</tt> <tt class="py-name">complex</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3295"></a><tt class="py-lineno">3295</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">complex</tt> </tt>
<a name="L3296"></a><tt class="py-lineno">3296</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3297"></a><tt class="py-lineno">3297</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">str</tt> </tt>
</div><a name="L3298"></a><tt class="py-lineno">3298</tt>  <tt class="py-line"> </tt>
<a name="_string_like"></a><div id="_string_like-def"><a name="L3299"></a><tt class="py-lineno">3299</tt> <a class="py-toggle" href="#" id="_string_like-toggle" onclick="return toggle('_string_like');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#_string_like">_string_like</a><tt class="py-op">(</tt><tt class="py-param">obj</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="_string_like-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="_string_like-expanded"><a name="L3300"></a><tt class="py-lineno">3300</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> <tt class="py-name">obj</tt> <tt class="py-op">+</tt> <tt class="py-string">''</tt> </tt>
<a name="L3301"></a><tt class="py-lineno">3301</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-op">(</tt><tt class="py-name">TypeError</tt><tt class="py-op">,</tt> <tt class="py-name">ValueError</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> <tt class="py-keyword">return</tt> <tt id="link-1069" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1069', 'False', 'link-28');">False</a></tt> </tt>
<a name="L3302"></a><tt class="py-lineno">3302</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-1070" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-1070', 'True', 'link-38');">True</a></tt> </tt>
</div><a name="L3303"></a><tt class="py-lineno">3303</tt>  <tt class="py-line"> </tt>
<a name="saveTxt"></a><div id="saveTxt-def"><a name="L3304"></a><tt class="py-lineno">3304</tt> <a class="py-toggle" href="#" id="saveTxt-toggle" onclick="return toggle('saveTxt');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#saveTxt">saveTxt</a><tt class="py-op">(</tt><tt class="py-param">arrND</tt><tt class="py-op">,</tt> <tt class="py-param">fname</tt><tt class="py-op">,</tt> <tt class="py-param">fmt</tt><tt class="py-op">=</tt><tt class="py-string">'%8.3f'</tt><tt class="py-op">,</tt> <tt class="py-param">delimiter</tt><tt class="py-op">=</tt><tt class="py-string">' '</tt><tt class="py-op">,</tt> <tt class="py-param">intro</tt><tt class="py-op">=</tt><tt class="py-string">''</tt><tt class="py-op">,</tt>  <tt class="py-param">transpose</tt><tt class="py-op">=</tt><tt id="link-1071" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1071', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="saveTxt-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="saveTxt-expanded"><a name="L3305"></a><tt class="py-lineno">3305</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3306"></a><tt class="py-lineno">3306</tt>  <tt class="py-line"><tt class="py-docstring">    write 2D arrays as rows(-2 axis) of columns (last axis)</tt> </tt>
<a name="L3307"></a><tt class="py-lineno">3307</tt>  <tt class="py-line"><tt class="py-docstring">    for each additional dimension, prepend a column for the axis index </tt> </tt>
<a name="L3308"></a><tt class="py-lineno">3308</tt>  <tt class="py-line"><tt class="py-docstring">      (total of arrNDndim-2 additional columns)</tt> </tt>
<a name="L3309"></a><tt class="py-lineno">3309</tt>  <tt class="py-line"><tt class="py-docstring">    1D arrays are written as one value per line</tt> </tt>
<a name="L3310"></a><tt class="py-lineno">3310</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3311"></a><tt class="py-lineno">3311</tt>  <tt class="py-line"><tt class="py-docstring">    list of arrays are converted into mockNDarrays</tt> </tt>
<a name="L3312"></a><tt class="py-lineno">3312</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3313"></a><tt class="py-lineno">3313</tt>  <tt class="py-line"><tt class="py-docstring">    fname can be one of an open file, a filename or a filename ending on ".gz"</tt> </tt>
<a name="L3314"></a><tt class="py-lineno">3314</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3315"></a><tt class="py-lineno">3315</tt>  <tt class="py-line"><tt class="py-docstring">    start by writing intro into the file</tt> </tt>
<a name="L3316"></a><tt class="py-lineno">3316</tt>  <tt class="py-line"><tt class="py-docstring">      if intro does not end with "\\n", auto-append a newline</tt> </tt>
<a name="L3317"></a><tt class="py-lineno">3317</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3318"></a><tt class="py-lineno">3318</tt>  <tt class="py-line"><tt class="py-docstring">    delimiter is used to separate the fields, eg delimiter ',' for</tt> </tt>
<a name="L3319"></a><tt class="py-lineno">3319</tt>  <tt class="py-line"><tt class="py-docstring">    comma-separated values</tt> </tt>
<a name="L3320"></a><tt class="py-lineno">3320</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3321"></a><tt class="py-lineno">3321</tt>  <tt class="py-line"><tt class="py-docstring">    if transpose: transpose last 2 dimensions of arrND before saving</tt> </tt>
<a name="L3322"></a><tt class="py-lineno">3322</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3323"></a><tt class="py-lineno">3323</tt>  <tt class="py-line"> </tt>
<a name="L3324"></a><tt class="py-lineno">3324</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-1072" class="py-name" targets="Function Priithon.useful._string_like()=Priithon.useful-module.html#_string_like"><a title="Priithon.useful._string_like" class="py-name" href="#" onclick="return doclink('link-1072', '_string_like', 'link-1072');">_string_like</a></tt><tt class="py-op">(</tt><tt class="py-name">fname</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3325"></a><tt class="py-lineno">3325</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">fname</tt><tt class="py-op">.</tt><tt class="py-name">endswith</tt><tt class="py-op">(</tt><tt class="py-string">'.gz'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3326"></a><tt class="py-lineno">3326</tt>  <tt class="py-line">            <tt class="py-keyword">import</tt> <tt class="py-name">gzip</tt> </tt>
<a name="L3327"></a><tt class="py-lineno">3327</tt>  <tt class="py-line">            <tt class="py-name">fh</tt> <tt class="py-op">=</tt> <tt class="py-name">gzip</tt><tt class="py-op">.</tt><tt id="link-1073" class="py-name"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-1073', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fname</tt><tt class="py-op">,</tt><tt class="py-string">'wb'</tt><tt class="py-op">)</tt> </tt>
<a name="L3328"></a><tt class="py-lineno">3328</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3329"></a><tt class="py-lineno">3329</tt>  <tt class="py-line">            <tt class="py-name">fh</tt> <tt class="py-op">=</tt> <tt class="py-name">file</tt><tt class="py-op">(</tt><tt class="py-name">fname</tt><tt class="py-op">,</tt><tt class="py-string">'w'</tt><tt class="py-op">)</tt> </tt>
<a name="L3330"></a><tt class="py-lineno">3330</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">hasattr</tt><tt class="py-op">(</tt><tt class="py-name">fname</tt><tt class="py-op">,</tt> <tt class="py-string">'readline'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3331"></a><tt class="py-lineno">3331</tt>  <tt class="py-line">        <tt class="py-name">fh</tt> <tt class="py-op">=</tt> <tt class="py-name">fname</tt> </tt>
<a name="L3332"></a><tt class="py-lineno">3332</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3333"></a><tt class="py-lineno">3333</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">(</tt><tt class="py-string">'fname must be a string or file handle'</tt><tt class="py-op">)</tt> </tt>
<a name="L3334"></a><tt class="py-lineno">3334</tt>  <tt class="py-line"> </tt>
<a name="L3335"></a><tt class="py-lineno">3335</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">intro</tt><tt class="py-op">)</tt><tt class="py-op">&gt;</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L3336"></a><tt class="py-lineno">3336</tt>  <tt class="py-line">        <tt class="py-name">fh</tt><tt class="py-op">.</tt><tt id="link-1074" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.write
Priithon.py.document.Document.write
Priithon.py.editwindow.EditWindow.write
Priithon.py.pseudo.PseudoFile.write
Priithon.py.shell.Shell.write" class="py-name" href="#" onclick="return doclink('link-1074', 'write', 'link-979');">write</a></tt><tt class="py-op">(</tt><tt class="py-name">intro</tt><tt class="py-op">)</tt> </tt>
<a name="L3337"></a><tt class="py-lineno">3337</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">intro</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">!=</tt> <tt class="py-string">'\n'</tt><tt class="py-op">:</tt> </tt>
<a name="L3338"></a><tt class="py-lineno">3338</tt>  <tt class="py-line">            <tt class="py-name">fh</tt><tt class="py-op">.</tt><tt id="link-1075" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.write
Priithon.py.document.Document.write
Priithon.py.editwindow.EditWindow.write
Priithon.py.pseudo.PseudoFile.write
Priithon.py.shell.Shell.write" class="py-name" href="#" onclick="return doclink('link-1075', 'write', 'link-979');">write</a></tt><tt class="py-op">(</tt><tt class="py-string">'\n'</tt><tt class="py-op">)</tt> </tt>
<a name="L3339"></a><tt class="py-lineno">3339</tt>  <tt class="py-line"> </tt>
<a name="L3340"></a><tt class="py-lineno">3340</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">hasattr</tt><tt class="py-op">(</tt><tt class="py-name">arrND</tt><tt class="py-op">,</tt> <tt class="py-string">"ndim"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3341"></a><tt class="py-lineno">3341</tt>  <tt class="py-line">        <tt class="py-keyword">from</tt> <tt class="py-op">.</tt><tt id="link-1076" class="py-name"><a title="Priithon.fftfuncs" class="py-name" href="#" onclick="return doclink('link-1076', 'fftfuncs', 'link-452');">fftfuncs</a></tt> <tt class="py-keyword">import</tt> <tt id="link-1077" class="py-name" targets="Module Priithon.mockNDarray=Priithon.mockNDarray-module.html,Class Priithon.mockNDarray.mockNDarray=Priithon.mockNDarray.mockNDarray-class.html"><a title="Priithon.mockNDarray
Priithon.mockNDarray.mockNDarray" class="py-name" href="#" onclick="return doclink('link-1077', 'mockNDarray', 'link-1077');">mockNDarray</a></tt> </tt>
<a name="L3342"></a><tt class="py-lineno">3342</tt>  <tt class="py-line">        <tt class="py-name">arrND</tt> <tt class="py-op">=</tt> <tt id="link-1078" class="py-name"><a title="Priithon.mockNDarray
Priithon.mockNDarray.mockNDarray" class="py-name" href="#" onclick="return doclink('link-1078', 'mockNDarray', 'link-1077');">mockNDarray</a></tt><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-name">arrND</tt><tt class="py-op">)</tt> </tt>
<a name="L3343"></a><tt class="py-lineno">3343</tt>  <tt class="py-line"> </tt>
<a name="L3344"></a><tt class="py-lineno">3344</tt>  <tt class="py-line"> </tt>
<a name="L3345"></a><tt class="py-lineno">3345</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">arrND</tt><tt class="py-op">.</tt><tt id="link-1079" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-1079', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L3346"></a><tt class="py-lineno">3346</tt>  <tt class="py-line">        <tt class="py-name">arrND</tt> <tt class="py-op">=</tt> <tt class="py-name">arrND</tt><tt class="py-op">.</tt><tt id="link-1080" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.view
Priithon.viewer.view
Priithon.viewer2.view" class="py-name" href="#" onclick="return doclink('link-1080', 'view', 'link-55');">view</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3347"></a><tt class="py-lineno">3347</tt>  <tt class="py-line">        <tt class="py-name">arrND</tt><tt class="py-op">.</tt><tt id="link-1081" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1081', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">arrND</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-number">1</tt> </tt>
<a name="L3348"></a><tt class="py-lineno">3348</tt>  <tt class="py-line"> </tt>
<a name="L3349"></a><tt class="py-lineno">3349</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-1082" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-1082', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">:</tt> </tt>
<a name="L3350"></a><tt class="py-lineno">3350</tt>  <tt class="py-line">        <tt class="py-name">nd</tt> <tt class="py-op">=</tt> <tt class="py-name">arrND</tt><tt class="py-op">.</tt><tt id="link-1083" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-1083', 'ndim', 'link-532');">ndim</a></tt> </tt>
<a name="L3351"></a><tt class="py-lineno">3351</tt>  <tt class="py-line">        <tt class="py-name">arrND</tt> <tt class="py-op">=</tt> <tt class="py-name">arrND</tt><tt class="py-op">.</tt><tt id="link-1084" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-1084', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">(</tt> <tt id="link-1085" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1085', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">nd</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt class="py-op">[</tt><tt class="py-name">nd</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-name">nd</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt> </tt>
<a name="L3352"></a><tt class="py-lineno">3352</tt>  <tt class="py-line"> </tt>
<a name="L3353"></a><tt class="py-lineno">3353</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">arrND</tt><tt class="py-op">.</tt><tt id="link-1086" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-1086', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">&gt;</tt> <tt class="py-number">2</tt><tt class="py-op">:</tt> </tt>
<a name="L3354"></a><tt class="py-lineno">3354</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt id="link-1087" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1087', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ndindex</tt><tt class="py-op">(</tt><tt class="py-name">arrND</tt><tt class="py-op">.</tt><tt id="link-1088" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1088', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">2</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3355"></a><tt class="py-lineno">3355</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt id="link-1089" class="py-name" targets="Function Priithon.plt.interface.row()=Priithon.plt.interface-module.html#row"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1089', 'row', 'link-1089');">row</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">arrND</tt><tt class="py-op">[</tt><tt id="link-1090" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1090', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">:</tt> </tt>
<a name="L3356"></a><tt class="py-lineno">3356</tt>  <tt class="py-line">                <tt class="py-name">fh</tt><tt class="py-op">.</tt><tt id="link-1091" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.write
Priithon.py.document.Document.write
Priithon.py.editwindow.EditWindow.write
Priithon.py.pseudo.PseudoFile.write
Priithon.py.shell.Shell.write" class="py-name" href="#" onclick="return doclink('link-1091', 'write', 'link-979');">write</a></tt><tt class="py-op">(</tt> <tt class="py-name">delimiter</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-name">str</tt><tt class="py-op">,</tt><tt id="link-1092" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1092', 'i', 'link-65');">i</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt class="py-name">delimiter</tt> <tt class="py-op">+</tt> </tt>
<a name="L3357"></a><tt class="py-lineno">3357</tt>  <tt class="py-line">                          <tt class="py-name">delimiter</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-name">fmt</tt><tt class="py-op">%</tt><tt class="py-name">val</tt> <tt class="py-keyword">for</tt> <tt class="py-name">val</tt> <tt class="py-keyword">in</tt> <tt id="link-1093" class="py-name"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1093', 'row', 'link-1089');">row</a></tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt class="py-string">'\n'</tt><tt class="py-op">)</tt> </tt>
<a name="L3358"></a><tt class="py-lineno">3358</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3359"></a><tt class="py-lineno">3359</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt id="link-1094" class="py-name"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1094', 'row', 'link-1089');">row</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">arrND</tt><tt class="py-op">:</tt> </tt>
<a name="L3360"></a><tt class="py-lineno">3360</tt>  <tt class="py-line">            <tt class="py-name">fh</tt><tt class="py-op">.</tt><tt id="link-1095" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.write
Priithon.py.document.Document.write
Priithon.py.editwindow.EditWindow.write
Priithon.py.pseudo.PseudoFile.write
Priithon.py.shell.Shell.write" class="py-name" href="#" onclick="return doclink('link-1095', 'write', 'link-979');">write</a></tt><tt class="py-op">(</tt> <tt class="py-name">delimiter</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-name">fmt</tt><tt class="py-op">%</tt><tt class="py-name">val</tt> <tt class="py-keyword">for</tt> <tt class="py-name">val</tt> <tt class="py-keyword">in</tt> <tt id="link-1096" class="py-name"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1096', 'row', 'link-1089');">row</a></tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt class="py-string">'\n'</tt><tt class="py-op">)</tt> </tt>
</div><a name="L3361"></a><tt class="py-lineno">3361</tt>  <tt class="py-line">         </tt>
<a name="loadTxt"></a><div id="loadTxt-def"><a name="L3362"></a><tt class="py-lineno">3362</tt> <a class="py-toggle" href="#" id="loadTxt-toggle" onclick="return toggle('loadTxt');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#loadTxt">loadTxt</a><tt class="py-op">(</tt><tt class="py-param">fname</tt><tt class="py-op">,</tt> <tt class="py-param">ndim</tt><tt class="py-op">=</tt><tt class="py-number">3</tt><tt class="py-op">,</tt> <tt class="py-param">dtype</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">delimiter</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">skipNlines</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt>  </tt>
<a name="L3363"></a><tt class="py-lineno">3363</tt>  <tt class="py-line">            <tt class="py-param">comments</tt><tt class="py-op">=</tt><tt class="py-string">'#'</tt><tt class="py-op">,</tt> <tt class="py-param">converters</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">usecols</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="loadTxt-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="loadTxt-expanded"><a name="L3364"></a><tt class="py-lineno">3364</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3365"></a><tt class="py-lineno">3365</tt>  <tt class="py-line"><tt class="py-docstring">    load a text file into a ndimensional array (mockNDarray)</tt> </tt>
<a name="L3366"></a><tt class="py-lineno">3366</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3367"></a><tt class="py-lineno">3367</tt>  <tt class="py-line"><tt class="py-docstring">    1d arrays are columns of one line</tt> </tt>
<a name="L3368"></a><tt class="py-lineno">3368</tt>  <tt class="py-line"><tt class="py-docstring">    2d arrays are multiple rows (i.e. multiple 1d lines)</tt> </tt>
<a name="L3369"></a><tt class="py-lineno">3369</tt>  <tt class="py-line"><tt class="py-docstring">    higher-d arrays are like 2d arrays, where the first n-2 columns </tt> </tt>
<a name="L3370"></a><tt class="py-lineno">3370</tt>  <tt class="py-line"><tt class="py-docstring">        are taken to be the indices for the higher dimensions</tt> </tt>
<a name="L3371"></a><tt class="py-lineno">3371</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3372"></a><tt class="py-lineno">3372</tt>  <tt class="py-line"><tt class="py-docstring">    fname can be an open file or a filename or a filename ending on ".gz" or ".bz2"</tt> </tt>
<a name="L3373"></a><tt class="py-lineno">3373</tt>  <tt class="py-line"><tt class="py-docstring">    if dtype is not None, force data to be dtype</tt> </tt>
<a name="L3374"></a><tt class="py-lineno">3374</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3375"></a><tt class="py-lineno">3375</tt>  <tt class="py-line"><tt class="py-docstring">    delimiter is a string-like character used to seperate values in the</tt> </tt>
<a name="L3376"></a><tt class="py-lineno">3376</tt>  <tt class="py-line"><tt class="py-docstring">    file. If delimiter is unspecified or none, any whitespace string is</tt> </tt>
<a name="L3377"></a><tt class="py-lineno">3377</tt>  <tt class="py-line"><tt class="py-docstring">    a separator.</tt> </tt>
<a name="L3378"></a><tt class="py-lineno">3378</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3379"></a><tt class="py-lineno">3379</tt>  <tt class="py-line"><tt class="py-docstring">    lines or trailing line parts starting with `comments` are ignored</tt> </tt>
<a name="L3380"></a><tt class="py-lineno">3380</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3381"></a><tt class="py-lineno">3381</tt>  <tt class="py-line"><tt class="py-docstring">    converters, if not None, is a dictionary mapping column number to</tt> </tt>
<a name="L3382"></a><tt class="py-lineno">3382</tt>  <tt class="py-line"><tt class="py-docstring">    a function that will convert that column to a float.  Eg, if</tt> </tt>
<a name="L3383"></a><tt class="py-lineno">3383</tt>  <tt class="py-line"><tt class="py-docstring">    column 0 is a date string: converters={0:datestr2num}</tt> </tt>
<a name="L3384"></a><tt class="py-lineno">3384</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L3385"></a><tt class="py-lineno">3385</tt>  <tt class="py-line"><tt class="py-docstring">    usecols, if not None, is a sequence of integer column indexes to</tt> </tt>
<a name="L3386"></a><tt class="py-lineno">3386</tt>  <tt class="py-line"><tt class="py-docstring">    extract where 0 is the first column, eg usecols=(1,4,5) to extract</tt> </tt>
<a name="L3387"></a><tt class="py-lineno">3387</tt>  <tt class="py-line"><tt class="py-docstring">    just the 2nd, 5th and 6th columns</tt> </tt>
<a name="L3388"></a><tt class="py-lineno">3388</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3389"></a><tt class="py-lineno">3389</tt>  <tt class="py-line"><tt class="py-docstring">    after applying converters (at first) and usecols (after that),</tt> </tt>
<a name="L3390"></a><tt class="py-lineno">3390</tt>  <tt class="py-line"><tt class="py-docstring">    the first ndim-2 columns are interpreted as the nd-index</tt> </tt>
<a name="L3391"></a><tt class="py-lineno">3391</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3392"></a><tt class="py-lineno">3392</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-1097" class="py-name"><a title="Priithon.useful._string_like" class="py-name" href="#" onclick="return doclink('link-1097', '_string_like', 'link-1072');">_string_like</a></tt><tt class="py-op">(</tt><tt class="py-name">fname</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3393"></a><tt class="py-lineno">3393</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">fname</tt><tt class="py-op">.</tt><tt class="py-name">endswith</tt><tt class="py-op">(</tt><tt class="py-string">'.gz'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3394"></a><tt class="py-lineno">3394</tt>  <tt class="py-line">            <tt class="py-keyword">import</tt> <tt class="py-name">gzip</tt> </tt>
<a name="L3395"></a><tt class="py-lineno">3395</tt>  <tt class="py-line">            <tt class="py-name">fh</tt> <tt class="py-op">=</tt> <tt class="py-name">gzip</tt><tt class="py-op">.</tt><tt id="link-1098" class="py-name"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-1098', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fname</tt><tt class="py-op">)</tt> </tt>
<a name="L3396"></a><tt class="py-lineno">3396</tt>  <tt class="py-line">        <tt class="py-comment"># zip is an archive - should we just read the first file !?</tt> </tt>
<a name="L3397"></a><tt class="py-lineno">3397</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#elif fname.endswith('.zip'):</tt> </tt>
<a name="L3398"></a><tt class="py-lineno">3398</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#    import zip</tt> </tt>
<a name="L3399"></a><tt class="py-lineno">3399</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#    fh = zip.ZipFile(fname)</tt> </tt>
<a name="L3400"></a><tt class="py-lineno">3400</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-keyword">elif</tt> <tt class="py-name">fname</tt><tt class="py-op">.</tt><tt class="py-name">endswith</tt><tt class="py-op">(</tt><tt class="py-string">'.bz2'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3401"></a><tt class="py-lineno">3401</tt>  <tt class="py-line">            <tt class="py-keyword">import</tt> <tt class="py-name">bz2</tt> </tt>
<a name="L3402"></a><tt class="py-lineno">3402</tt>  <tt class="py-line">            <tt class="py-name">fh</tt> <tt class="py-op">=</tt> <tt class="py-name">bz2</tt><tt class="py-op">.</tt><tt class="py-name">BZ2File</tt><tt class="py-op">(</tt><tt class="py-name">fname</tt><tt class="py-op">)</tt> </tt>
<a name="L3403"></a><tt class="py-lineno">3403</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3404"></a><tt class="py-lineno">3404</tt>  <tt class="py-line">            <tt class="py-name">fh</tt> <tt class="py-op">=</tt> <tt class="py-name">file</tt><tt class="py-op">(</tt><tt class="py-name">fname</tt><tt class="py-op">)</tt> </tt>
<a name="L3405"></a><tt class="py-lineno">3405</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">hasattr</tt><tt class="py-op">(</tt><tt class="py-name">fname</tt><tt class="py-op">,</tt> <tt class="py-string">'readline'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3406"></a><tt class="py-lineno">3406</tt>  <tt class="py-line">        <tt class="py-name">fh</tt> <tt class="py-op">=</tt> <tt class="py-name">fname</tt> </tt>
<a name="L3407"></a><tt class="py-lineno">3407</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3408"></a><tt class="py-lineno">3408</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">(</tt><tt class="py-string">'fname must be a string or file handle'</tt><tt class="py-op">)</tt> </tt>
<a name="L3409"></a><tt class="py-lineno">3409</tt>  <tt class="py-line"> </tt>
<a name="L3410"></a><tt class="py-lineno">3410</tt>  <tt class="py-line">    <tt class="py-keyword">from</tt> <tt class="py-name">numpy</tt><tt class="py-op">.</tt><tt class="py-name">core</tt> <tt class="py-keyword">import</tt> <tt class="py-name">multiarray</tt> </tt>
<a name="L3411"></a><tt class="py-lineno">3411</tt>  <tt class="py-line">    <tt id="link-1099" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1099', 'dtype', 'link-19');">dtype</a></tt> <tt class="py-op">=</tt> <tt class="py-name">multiarray</tt><tt class="py-op">.</tt><tt id="link-1100" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1100', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">(</tt><tt id="link-1101" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1101', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">)</tt> </tt>
<a name="L3412"></a><tt class="py-lineno">3412</tt>  <tt class="py-line">    <tt class="py-name">defconv</tt> <tt class="py-op">=</tt> <tt id="link-1102" class="py-name" targets="Function Priithon.useful._getconv()=Priithon.useful-module.html#_getconv"><a title="Priithon.useful._getconv" class="py-name" href="#" onclick="return doclink('link-1102', '_getconv', 'link-1102');">_getconv</a></tt><tt class="py-op">(</tt><tt id="link-1103" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1103', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">)</tt> </tt>
<a name="L3413"></a><tt class="py-lineno">3413</tt>  <tt class="py-line">    <tt class="py-name">converterseq</tt> <tt class="py-op">=</tt> <tt class="py-name">None</tt>     </tt>
<a name="L3414"></a><tt class="py-lineno">3414</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">converters</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3415"></a><tt class="py-lineno">3415</tt>  <tt class="py-line">        <tt class="py-name">converters</tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt> </tt>
<a name="L3416"></a><tt class="py-lineno">3416</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-1104" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1104', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">names</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3417"></a><tt class="py-lineno">3417</tt>  <tt class="py-line">            <tt class="py-name">converterseq</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt id="link-1105" class="py-name"><a title="Priithon.useful._getconv" class="py-name" href="#" onclick="return doclink('link-1105', '_getconv', 'link-1102');">_getconv</a></tt><tt class="py-op">(</tt><tt id="link-1106" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1106', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">fields</tt><tt class="py-op">[</tt><tt id="link-1107" class="py-name"><a title="Priithon.py.crust.Crust.name
Priithon.py.crust.CrustFrame.name
Priithon.py.filling.Filling.name
Priithon.py.filling.FillingFrame.name
Priithon.py.filling.FillingText.name
Priithon.py.filling.FillingTree.name
Priithon.py.shell.Shell.name
Priithon.py.shell.ShellFacade.name
Priithon.py.shell.ShellFrame.name" class="py-name" href="#" onclick="return doclink('link-1107', 'name', 'link-20');">name</a></tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> \ </tt>
<a name="L3418"></a><tt class="py-lineno">3418</tt>  <tt class="py-line">                            <tt class="py-keyword">for</tt> <tt id="link-1108" class="py-name"><a title="Priithon.py.crust.Crust.name
Priithon.py.crust.CrustFrame.name
Priithon.py.filling.Filling.name
Priithon.py.filling.FillingFrame.name
Priithon.py.filling.FillingText.name
Priithon.py.filling.FillingTree.name
Priithon.py.shell.Shell.name
Priithon.py.shell.ShellFacade.name
Priithon.py.shell.ShellFrame.name" class="py-name" href="#" onclick="return doclink('link-1108', 'name', 'link-20');">name</a></tt> <tt class="py-keyword">in</tt> <tt id="link-1109" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1109', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">names</tt><tt class="py-op">]</tt> </tt>
<a name="L3419"></a><tt class="py-lineno">3419</tt>  <tt class="py-line">             </tt>
<a name="L3420"></a><tt class="py-lineno">3420</tt>  <tt class="py-line">     </tt>
<a name="L3421"></a><tt class="py-lineno">3421</tt>  <tt class="py-line">    <tt class="py-name">ndim2</tt> <tt class="py-op">=</tt> <tt id="link-1110" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-1110', 'ndim', 'link-532');">ndim</a></tt><tt class="py-op">-</tt><tt class="py-number">2</tt> </tt>
<a name="L3422"></a><tt class="py-lineno">3422</tt>  <tt class="py-line"> </tt>
<a name="L3423"></a><tt class="py-lineno">3423</tt>  <tt class="py-line">    <tt class="py-comment"># read file line by line into a dictionary of lists of rows</tt> </tt>
<a name="L3424"></a><tt class="py-lineno">3424</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">iiMax</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">*</tt> <tt class="py-name">ndim2</tt> </tt>
<a name="L3425"></a><tt class="py-lineno">3425</tt>  <tt class="py-line">    <tt class="py-name">Xii</tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt> </tt>
<a name="L3426"></a><tt class="py-lineno">3426</tt>  <tt class="py-line"> </tt>
<a name="L3427"></a><tt class="py-lineno">3427</tt>  <tt class="py-line">    <tt class="py-name">_converterseq_beforeLoop</tt> <tt class="py-op">=</tt> <tt class="py-name">converterseq</tt> </tt>
<a name="L3428"></a><tt class="py-lineno">3428</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-1111" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1111', 'i', 'link-65');">i</a></tt><tt class="py-op">,</tt><tt class="py-name">line</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">fh</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3429"></a><tt class="py-lineno">3429</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-1112" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1112', 'i', 'link-65');">i</a></tt><tt class="py-op">&lt;</tt><tt class="py-name">skipNlines</tt><tt class="py-op">:</tt> <tt class="py-keyword">continue</tt> </tt>
<a name="L3430"></a><tt class="py-lineno">3430</tt>  <tt class="py-line">        <tt class="py-name">line</tt> <tt class="py-op">=</tt> <tt class="py-name">line</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-name">line</tt><tt class="py-op">.</tt><tt class="py-name">find</tt><tt class="py-op">(</tt><tt class="py-name">comments</tt><tt class="py-op">)</tt><tt class="py-op">]</tt><tt class="py-op">.</tt><tt class="py-name">strip</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3431"></a><tt class="py-lineno">3431</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">line</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> <tt class="py-keyword">continue</tt> </tt>
<a name="L3432"></a><tt class="py-lineno">3432</tt>  <tt class="py-line">        <tt class="py-name">vals</tt> <tt class="py-op">=</tt> <tt class="py-name">line</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-name">delimiter</tt><tt class="py-op">)</tt> </tt>
<a name="L3433"></a><tt class="py-lineno">3433</tt>  <tt class="py-line"> </tt>
<a name="L3434"></a><tt class="py-lineno">3434</tt>  <tt class="py-line">        <tt class="py-name">converterseq</tt> <tt class="py-op">=</tt> <tt class="py-name">_converterseq_beforeLoop</tt> </tt>
<a name="L3435"></a><tt class="py-lineno">3435</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">converterseq</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3436"></a><tt class="py-lineno">3436</tt>  <tt class="py-line">           <tt class="py-name">converterseq</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-name">converters</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-name">j</tt><tt class="py-op">,</tt><tt class="py-name">defconv</tt><tt class="py-op">)</tt> \ </tt>
<a name="L3437"></a><tt class="py-lineno">3437</tt>  <tt class="py-line">                           <tt class="py-keyword">for</tt> <tt class="py-name">j</tt> <tt class="py-keyword">in</tt> <tt class="py-name">xrange</tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">vals</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L3438"></a><tt class="py-lineno">3438</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">usecols</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3439"></a><tt class="py-lineno">3439</tt>  <tt class="py-line">            <tt id="link-1113" class="py-name"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1113', 'row', 'link-1089');">row</a></tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-name">converterseq</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">]</tt><tt class="py-op">(</tt><tt class="py-name">vals</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-keyword">for</tt> <tt class="py-name">j</tt> <tt class="py-keyword">in</tt> <tt class="py-name">usecols</tt><tt class="py-op">]</tt> </tt>
<a name="L3440"></a><tt class="py-lineno">3440</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3441"></a><tt class="py-lineno">3441</tt>  <tt class="py-line">            <tt id="link-1114" class="py-name"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1114', 'row', 'link-1089');">row</a></tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-name">converterseq</tt><tt class="py-op">[</tt><tt class="py-name">j</tt><tt class="py-op">]</tt><tt class="py-op">(</tt><tt class="py-name">val</tt><tt class="py-op">)</tt> <tt class="py-keyword">for</tt> <tt class="py-name">j</tt><tt class="py-op">,</tt><tt class="py-name">val</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">vals</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L3442"></a><tt class="py-lineno">3442</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-1115" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1115', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">.</tt><tt class="py-name">names</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3443"></a><tt class="py-lineno">3443</tt>  <tt class="py-line">            <tt id="link-1116" class="py-name"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1116', 'row', 'link-1089');">row</a></tt> <tt class="py-op">=</tt> <tt class="py-name">tuple</tt><tt class="py-op">(</tt><tt id="link-1117" class="py-name"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1117', 'row', 'link-1089');">row</a></tt><tt class="py-op">)</tt> </tt>
<a name="L3444"></a><tt class="py-lineno">3444</tt>  <tt class="py-line"> </tt>
<a name="L3445"></a><tt class="py-lineno">3445</tt>  <tt class="py-line">        <tt class="py-name">ii</tt> <tt class="py-op">=</tt> <tt class="py-name">tuple</tt><tt class="py-op">(</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-name">int</tt><tt class="py-op">,</tt> <tt id="link-1118" class="py-name"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1118', 'row', 'link-1089');">row</a></tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-name">ndim2</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> <tt class="py-comment"># nd-index</tt> </tt>
<a name="L3446"></a><tt class="py-lineno">3446</tt>  <tt class="py-line">        <tt class="py-comment"># line part AFTER nd-indices</tt> </tt>
<a name="L3447"></a><tt class="py-lineno">3447</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt id="link-1119" class="py-name"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1119', 'row', 'link-1089');">row</a></tt> <tt class="py-op">=</tt> <tt id="link-1120" class="py-name"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1120', 'row', 'link-1089');">row</a></tt><tt class="py-op">[</tt><tt class="py-name">ndim2</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L3448"></a><tt class="py-lineno">3448</tt>  <tt class="py-line"> </tt>
<a name="L3449"></a><tt class="py-lineno">3449</tt>  <tt class="py-line"> </tt>
<a name="L3450"></a><tt class="py-lineno">3450</tt>  <tt class="py-line">        <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L3451"></a><tt class="py-lineno">3451</tt>  <tt class="py-line">            <tt class="py-name">X</tt> <tt class="py-op">=</tt> <tt class="py-name">Xii</tt><tt class="py-op">[</tt> <tt class="py-name">ii</tt> <tt class="py-op">]</tt> </tt>
<a name="L3452"></a><tt class="py-lineno">3452</tt>  <tt class="py-line">        <tt class="py-keyword">except</tt> <tt class="py-name">KeyError</tt><tt class="py-op">:</tt> </tt>
<a name="L3453"></a><tt class="py-lineno">3453</tt>  <tt class="py-line">            <tt class="py-name">X</tt> <tt class="py-op">=</tt> <tt class="py-name">Xii</tt><tt class="py-op">[</tt> <tt class="py-name">ii</tt> <tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L3454"></a><tt class="py-lineno">3454</tt>  <tt class="py-line"> </tt>
<a name="L3455"></a><tt class="py-lineno">3455</tt>  <tt class="py-line">        <tt class="py-keyword">from</tt> <tt class="py-name">__builtin__</tt> <tt class="py-keyword">import</tt> <tt id="link-1121" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-1121', 'max', 'link-172');">max</a></tt> </tt>
<a name="L3456"></a><tt class="py-lineno">3456</tt>  <tt class="py-line">        <tt class="py-name">iiMax</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt id="link-1122" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-1122', 'max', 'link-172');">max</a></tt><tt class="py-op">(</tt><tt class="py-name">j</tt><tt class="py-op">,</tt><tt id="link-1123" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-1123', 'k', 'link-99');">k</a></tt><tt class="py-op">)</tt> <tt class="py-keyword">for</tt> <tt class="py-name">j</tt><tt class="py-op">,</tt><tt id="link-1124" class="py-name"><a title="Priithon.py.introspect.k" class="py-name" href="#" onclick="return doclink('link-1124', 'k', 'link-99');">k</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">zip</tt><tt class="py-op">(</tt><tt class="py-name">iiMax</tt><tt class="py-op">,</tt><tt class="py-name">ii</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L3457"></a><tt class="py-lineno">3457</tt>  <tt class="py-line">        <tt class="py-name">X</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt id="link-1125" class="py-name"><a title="Priithon.plt.interface.row" class="py-name" href="#" onclick="return doclink('link-1125', 'row', 'link-1089');">row</a></tt><tt class="py-op">)</tt> </tt>
<a name="L3458"></a><tt class="py-lineno">3458</tt>  <tt class="py-line"> </tt>
<a name="L3459"></a><tt class="py-lineno">3459</tt>  <tt class="py-line">    <tt class="py-comment"># convert list of rows into (real) ndarrays; for each &gt;2 dimensional index separately</tt> </tt>
<a name="L3460"></a><tt class="py-lineno">3460</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L3461"></a><tt class="py-lineno">3461</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">ii</tt><tt class="py-op">,</tt><tt class="py-name">X</tt> <tt class="py-keyword">in</tt> <tt class="py-name">Xii</tt><tt class="py-op">.</tt><tt class="py-name">iteritems</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3462"></a><tt class="py-lineno">3462</tt>  <tt class="py-line">        <tt class="py-name">Xii</tt><tt class="py-op">[</tt><tt class="py-name">ii</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">X</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt class="py-name">X</tt><tt class="py-op">,</tt> <tt id="link-1126" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.dtype" class="py-name" href="#" onclick="return doclink('link-1126', 'dtype', 'link-19');">dtype</a></tt><tt class="py-op">)</tt> </tt>
<a name="L3463"></a><tt class="py-lineno">3463</tt>  <tt class="py-line">        <tt class="py-comment">##20100312 why this magic !?</tt> </tt>
<a name="L3464"></a><tt class="py-lineno">3464</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#20100312 r,c = X.shape</tt> </tt>
<a name="L3465"></a><tt class="py-lineno">3465</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#20100312 if r==1 or c==1:</tt> </tt>
<a name="L3466"></a><tt class="py-lineno">3466</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#20100312     DEBUG_HERE()</tt> </tt>
<a name="L3467"></a><tt class="py-lineno">3467</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-comment">#20100312     X.shape = max((r,c)),</tt> </tt>
<a name="L3468"></a><tt class="py-lineno">3468</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L3469"></a><tt class="py-lineno">3469</tt>  <tt class="py-line"> </tt>
<a name="L3470"></a><tt class="py-lineno">3470</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ndim2</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L3471"></a><tt class="py-lineno">3471</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">Xii</tt><tt class="py-op">[</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L3472"></a><tt class="py-lineno">3472</tt>  <tt class="py-line"> </tt>
<a name="L3473"></a><tt class="py-lineno">3473</tt>  <tt class="py-line">    <tt class="py-name">shape2</tt> <tt class="py-op">=</tt> <tt class="py-name">tuple</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-name">im</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> <tt class="py-keyword">for</tt> <tt class="py-name">im</tt> <tt class="py-keyword">in</tt> <tt class="py-name">iiMax</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L3474"></a><tt class="py-lineno">3474</tt>  <tt class="py-line"> </tt>
<a name="L3475"></a><tt class="py-lineno">3475</tt>  <tt class="py-line">    <tt class="py-comment"># convert dictionary of &gt;2 dimensional indeces into nested lists of (real) arrays</tt> </tt>
<a name="L3476"></a><tt class="py-lineno">3476</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">nestedListsOfArrays</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-name">None</tt><tt class="py-op">]</tt> <tt class="py-op">*</tt> <tt class="py-op">(</tt><tt class="py-name">shape2</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L3477"></a><tt class="py-lineno">3477</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">len_i</tt> <tt class="py-keyword">in</tt> <tt class="py-name">shape2</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">:</tt> <tt class="py-comment"># same as [-2::-1]</tt> </tt>
<a name="L3478"></a><tt class="py-lineno">3478</tt>  <tt class="py-line">        <tt class="py-name">nestedListsOfArrays</tt><tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-name">nestedListsOfArrays</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> <tt class="py-keyword">for</tt>  <tt class="py-name">j</tt> <tt class="py-keyword">in</tt> <tt id="link-1127" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1127', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">len_i</tt><tt class="py-op">)</tt><tt class="py-op">]</tt> </tt>
<a name="L3479"></a><tt class="py-lineno">3479</tt>  <tt class="py-line"> </tt>
<a name="L3480"></a><tt class="py-lineno">3480</tt>  <tt class="py-line">    <tt class="py-comment">#print nestedListsOfArrays</tt> </tt>
<a name="L3481"></a><tt class="py-lineno">3481</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L3482"></a><tt class="py-lineno">3482</tt>  <tt class="py-line">    <tt class="py-comment">#  # replace the Nones by the arrays</tt> </tt>
<a name="L3483"></a><tt class="py-lineno">3483</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">for</tt> <tt class="py-name">ii</tt><tt class="py-op">,</tt><tt class="py-name">X</tt> <tt class="py-keyword">in</tt> <tt class="py-name">Xii</tt><tt class="py-op">.</tt><tt class="py-name">iteritems</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3484"></a><tt class="py-lineno">3484</tt>  <tt class="py-line">        <tt class="py-name">nLAi</tt> <tt class="py-op">=</tt> <tt class="py-name">nestedListsOfArrays</tt> </tt>
<a name="L3485"></a><tt class="py-lineno">3485</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt id="link-1128" class="py-name" targets="Variable Priithon.splitND2.iii=Priithon.splitND2-module.html#iii"><a title="Priithon.splitND2.iii" class="py-name" href="#" onclick="return doclink('link-1128', 'iii', 'link-1128');">iii</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">ii</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">:</tt> </tt>
<a name="L3486"></a><tt class="py-lineno">3486</tt>  <tt class="py-line">            <tt class="py-name">nLAi</tt> <tt class="py-op">=</tt> <tt class="py-name">nLAi</tt><tt class="py-op">[</tt><tt id="link-1129" class="py-name"><a title="Priithon.splitND2.iii" class="py-name" href="#" onclick="return doclink('link-1129', 'iii', 'link-1128');">iii</a></tt><tt class="py-op">]</tt> </tt>
<a name="L3487"></a><tt class="py-lineno">3487</tt>  <tt class="py-line">        <tt class="py-name">nLAi</tt><tt class="py-op">[</tt><tt class="py-name">ii</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">X</tt> </tt>
<a name="L3488"></a><tt class="py-lineno">3488</tt>  <tt class="py-line"> </tt>
<a name="L3489"></a><tt class="py-lineno">3489</tt>  <tt class="py-line">    <tt class="py-comment">#print nestedListsOfArrays</tt> </tt>
<a name="L3490"></a><tt class="py-lineno">3490</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#return nestedListsOfArrays</tt> </tt>
<a name="L3491"></a><tt class="py-lineno">3491</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L3492"></a><tt class="py-lineno">3492</tt>  <tt class="py-line">    <tt class="py-comment"># turn list of lists into mockNDarrays (of mockNDarrays ... of real arrays)</tt> </tt>
<a name="L3493"></a><tt class="py-lineno">3493</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L3494"></a><tt class="py-lineno">3494</tt>  <tt class="py-line">    <tt class="py-comment">#print ndim2, shape2</tt> </tt>
<a name="L3495"></a><tt class="py-lineno">3495</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">from</tt> <tt class="py-op">.</tt><tt id="link-1130" class="py-name"><a title="Priithon.fftfuncs" class="py-name" href="#" onclick="return doclink('link-1130', 'fftfuncs', 'link-452');">fftfuncs</a></tt> <tt class="py-keyword">import</tt> <tt id="link-1131" class="py-name"><a title="Priithon.mockNDarray
Priithon.mockNDarray.mockNDarray" class="py-name" href="#" onclick="return doclink('link-1131', 'mockNDarray', 'link-1077');">mockNDarray</a></tt> </tt>
<a name="L3496"></a><tt class="py-lineno">3496</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ndim2</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L3497"></a><tt class="py-lineno">3497</tt>  <tt class="py-line">        <tt class="py-name">nLAi</tt> <tt class="py-op">=</tt> <tt id="link-1132" class="py-name"><a title="Priithon.mockNDarray
Priithon.mockNDarray.mockNDarray" class="py-name" href="#" onclick="return doclink('link-1132', 'mockNDarray', 'link-1077');">mockNDarray</a></tt><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-name">nestedListsOfArrays</tt><tt class="py-op">)</tt> </tt>
<a name="L3498"></a><tt class="py-lineno">3498</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> <tt class="py-comment"># 20090305: CHECK if this "else" section could now be handled (like the ndim2==1 case) by extended mockNDarray handling of nested lists</tt> </tt>
<a name="L3499"></a><tt class="py-lineno">3499</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">order</tt> <tt class="py-keyword">in</tt> <tt id="link-1133" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1133', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">ndim2</tt><tt class="py-op">,</tt><tt class="py-number">1</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3500"></a><tt class="py-lineno">3500</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt class="py-name">ii</tt> <tt class="py-keyword">in</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ndindex</tt><tt class="py-op">(</tt> <tt class="py-name">shape2</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-name">order</tt><tt class="py-op">]</tt> <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3501"></a><tt class="py-lineno">3501</tt>  <tt class="py-line">                <tt class="py-comment">#print order, ii</tt> </tt>
<a name="L3502"></a><tt class="py-lineno">3502</tt>  <tt class="py-line"><tt class="py-comment"></tt>                <tt class="py-name">nLAi</tt> <tt class="py-op">=</tt> <tt class="py-name">nestedListsOfArrays</tt> </tt>
<a name="L3503"></a><tt class="py-lineno">3503</tt>  <tt class="py-line">                <tt class="py-keyword">for</tt> <tt id="link-1134" class="py-name"><a title="Priithon.splitND2.iii" class="py-name" href="#" onclick="return doclink('link-1134', 'iii', 'link-1128');">iii</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">ii</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">:</tt> </tt>
<a name="L3504"></a><tt class="py-lineno">3504</tt>  <tt class="py-line">                    <tt class="py-name">nLAi</tt> <tt class="py-op">=</tt> <tt class="py-name">nLAi</tt><tt class="py-op">[</tt><tt id="link-1135" class="py-name"><a title="Priithon.splitND2.iii" class="py-name" href="#" onclick="return doclink('link-1135', 'iii', 'link-1128');">iii</a></tt><tt class="py-op">]</tt> </tt>
<a name="L3505"></a><tt class="py-lineno">3505</tt>  <tt class="py-line">                <tt class="py-name">nLAi</tt><tt class="py-op">[</tt><tt class="py-name">ii</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt id="link-1136" class="py-name"><a title="Priithon.mockNDarray
Priithon.mockNDarray.mockNDarray" class="py-name" href="#" onclick="return doclink('link-1136', 'mockNDarray', 'link-1077');">mockNDarray</a></tt><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-name">nLAi</tt><tt class="py-op">[</tt><tt class="py-name">ii</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L3506"></a><tt class="py-lineno">3506</tt>  <tt class="py-line">        <tt class="py-name">nLAi</tt> <tt class="py-op">=</tt> <tt id="link-1137" class="py-name"><a title="Priithon.mockNDarray
Priithon.mockNDarray.mockNDarray" class="py-name" href="#" onclick="return doclink('link-1137', 'mockNDarray', 'link-1077');">mockNDarray</a></tt><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-name">nLAi</tt><tt class="py-op">)</tt> </tt>
<a name="L3507"></a><tt class="py-lineno">3507</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">nLAi</tt> </tt>
</div><a name="L3508"></a><tt class="py-lineno">3508</tt>  <tt class="py-line"> </tt>
<a name="text2array"></a><div id="text2array-def"><a name="L3509"></a><tt class="py-lineno">3509</tt> <a class="py-toggle" href="#" id="text2array-toggle" onclick="return toggle('text2array');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#text2array">text2array</a><tt class="py-op">(</tt><tt class="py-param">txt</tt><tt class="py-op">,</tt> <tt class="py-param">transpose</tt><tt class="py-op">=</tt><tt id="link-1138" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1138', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">comment</tt><tt class="py-op">=</tt><tt class="py-string">'#'</tt><tt class="py-op">,</tt> <tt class="py-param">sep</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">convFcn</tt> <tt class="py-op">=</tt> <tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">skipNlines</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-param">convertDecimalKomma</tt><tt class="py-op">=</tt><tt id="link-1139" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1139', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="text2array-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="text2array-expanded"><a name="L3510"></a><tt class="py-lineno">3510</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3511"></a><tt class="py-lineno">3511</tt>  <tt class="py-line"><tt class="py-docstring">    Return an array containing the data contained as text in txt. This</tt> </tt>
<a name="L3512"></a><tt class="py-lineno">3512</tt>  <tt class="py-line"><tt class="py-docstring">    function works for arbitrary data types (every array element can be</tt> </tt>
<a name="L3513"></a><tt class="py-lineno">3513</tt>  <tt class="py-line"><tt class="py-docstring">    given by an arbitrary Python expression), but at the price of being</tt> </tt>
<a name="L3514"></a><tt class="py-lineno">3514</tt>  <tt class="py-line"><tt class="py-docstring">    slow. </tt> </tt>
<a name="L3515"></a><tt class="py-lineno">3515</tt>  <tt class="py-line"><tt class="py-docstring">   </tt> </tt>
<a name="L3516"></a><tt class="py-lineno">3516</tt>  <tt class="py-line"><tt class="py-docstring">    if convFcn is not None:</tt> </tt>
<a name="L3517"></a><tt class="py-lineno">3517</tt>  <tt class="py-line"><tt class="py-docstring">        convFcn is called for each "cell" value - a string !.</tt> </tt>
<a name="L3518"></a><tt class="py-lineno">3518</tt>  <tt class="py-line"><tt class="py-docstring">        useful here: "N.float32"  # WRONG !! THIS DOES NOT WORK FIXME !</tt> </tt>
<a name="L3519"></a><tt class="py-lineno">3519</tt>  <tt class="py-line"><tt class="py-docstring">    else:</tt> </tt>
<a name="L3520"></a><tt class="py-lineno">3520</tt>  <tt class="py-line"><tt class="py-docstring">        "eval" is called for each cell</tt> </tt>
<a name="L3521"></a><tt class="py-lineno">3521</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3522"></a><tt class="py-lineno">3522</tt>  <tt class="py-line"><tt class="py-docstring">    if sep is None, any white space is seen as field separator</tt> </tt>
<a name="L3523"></a><tt class="py-lineno">3523</tt>  <tt class="py-line"><tt class="py-docstring">    ignore all lines that start with any character contained in comment</tt> </tt>
<a name="L3524"></a><tt class="py-lineno">3524</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3525"></a><tt class="py-lineno">3525</tt>  <tt class="py-line"><tt class="py-docstring">    if convertDecimalKomma:</tt> </tt>
<a name="L3526"></a><tt class="py-lineno">3526</tt>  <tt class="py-line"><tt class="py-docstring">       convert e.g. "10,2" to "10.2"</tt> </tt>
<a name="L3527"></a><tt class="py-lineno">3527</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3528"></a><tt class="py-lineno">3528</tt>  <tt class="py-line">  </tt>
<a name="L3529"></a><tt class="py-lineno">3529</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">convertDecimalKomma</tt><tt class="py-op">:</tt> </tt>
<a name="L3530"></a><tt class="py-lineno">3530</tt>  <tt class="py-line">        <tt class="py-comment">#from .useful import strTranslate</tt> </tt>
<a name="L3531"></a><tt class="py-lineno">3531</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-keyword">if</tt> <tt class="py-name">convFcn</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3532"></a><tt class="py-lineno">3532</tt>  <tt class="py-line">            <tt class="py-keyword">def</tt> <tt class="py-def-name">fn</tt><tt class="py-op">(</tt><tt class="py-param">numTxt</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3533"></a><tt class="py-lineno">3533</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">convFcn</tt><tt class="py-op">(</tt> <tt id="link-1140" class="py-name" targets="Function Priithon.useful.strTranslate()=Priithon.useful-module.html#strTranslate"><a title="Priithon.useful.strTranslate" class="py-name" href="#" onclick="return doclink('link-1140', 'strTranslate', 'link-1140');">strTranslate</a></tt><tt class="py-op">(</tt><tt class="py-name">numTxt</tt><tt class="py-op">,</tt> <tt class="py-string">','</tt><tt class="py-op">,</tt> <tt class="py-string">'.'</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
</div><a name="L3534"></a><tt class="py-lineno">3534</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3535"></a><tt class="py-lineno">3535</tt>  <tt class="py-line">            <tt class="py-keyword">def</tt> <tt class="py-def-name">fn</tt><tt class="py-op">(</tt><tt class="py-param">numTxt</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3536"></a><tt class="py-lineno">3536</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">eval</tt><tt class="py-op">(</tt><tt id="link-1141" class="py-name"><a title="Priithon.useful.strTranslate" class="py-name" href="#" onclick="return doclink('link-1141', 'strTranslate', 'link-1140');">strTranslate</a></tt><tt class="py-op">(</tt><tt class="py-name">numTxt</tt><tt class="py-op">,</tt> <tt class="py-string">','</tt><tt class="py-op">,</tt> <tt class="py-string">'.'</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L3537"></a><tt class="py-lineno">3537</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3538"></a><tt class="py-lineno">3538</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">convFcn</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3539"></a><tt class="py-lineno">3539</tt>  <tt class="py-line">            <tt class="py-keyword">def</tt> <tt class="py-def-name">fn</tt><tt class="py-op">(</tt><tt class="py-param">x</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3540"></a><tt class="py-lineno">3540</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">convFcn</tt><tt class="py-op">(</tt><tt id="link-1142" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1142', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt> </tt>
</div><a name="L3541"></a><tt class="py-lineno">3541</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3542"></a><tt class="py-lineno">3542</tt>  <tt class="py-line">            <tt class="py-keyword">def</tt> <tt class="py-def-name">fn</tt><tt class="py-op">(</tt><tt class="py-param">x</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3543"></a><tt class="py-lineno">3543</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">eval</tt><tt class="py-op">(</tt><tt id="link-1143" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1143', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt> </tt>
</div><a name="L3544"></a><tt class="py-lineno">3544</tt>  <tt class="py-line"> </tt>
<a name="L3545"></a><tt class="py-lineno">3545</tt>  <tt class="py-line"> </tt>
<a name="L3546"></a><tt class="py-lineno">3546</tt>  <tt class="py-line">    <tt id="link-1144" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-1144', 'data', 'link-464');">data</a></tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L3547"></a><tt class="py-lineno">3547</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">line</tt> <tt class="py-keyword">in</tt> <tt class="py-name">txt</tt><tt class="py-op">.</tt><tt class="py-name">splitlines</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">[</tt><tt class="py-name">skipNlines</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">:</tt> </tt>
<a name="L3548"></a><tt class="py-lineno">3548</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">line</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-keyword">in</tt> <tt class="py-name">comment</tt><tt class="py-op">:</tt> </tt>
<a name="L3549"></a><tt class="py-lineno">3549</tt>  <tt class="py-line">            <tt id="link-1145" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-1145', 'data', 'link-464');">data</a></tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-name">line</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-name">sep</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L3550"></a><tt class="py-lineno">3550</tt>  <tt class="py-line">    <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">array</tt><tt class="py-op">(</tt><tt id="link-1146" class="py-name"><a title="Priithon.viewerRubberbandMode.viewerRubberbandMode.data" class="py-name" href="#" onclick="return doclink('link-1146', 'data', 'link-464');">data</a></tt><tt class="py-op">)</tt> </tt>
<a name="L3551"></a><tt class="py-lineno">3551</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-1147" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1147', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt> <tt class="py-keyword">or</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-1148" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-1148', 'ndim', 'link-532');">ndim</a></tt><tt class="py-op">&gt;</tt><tt class="py-number">1</tt> <tt class="py-keyword">and</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt id="link-1149" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1149', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L3552"></a><tt class="py-lineno">3552</tt>  <tt class="py-line">        <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">ravel</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L3553"></a><tt class="py-lineno">3553</tt>  <tt class="py-line"> </tt>
<a name="L3554"></a><tt class="py-lineno">3554</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-1150" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.transpose" class="py-name" href="#" onclick="return doclink('link-1150', 'transpose', 'link-470');">transpose</a></tt><tt class="py-op">:</tt> </tt>
<a name="L3555"></a><tt class="py-lineno">3555</tt>  <tt class="py-line">        <tt class="py-name">a</tt> <tt class="py-op">=</tt> <tt class="py-name">a</tt><tt class="py-op">.</tt><tt class="py-name">T</tt> </tt>
<a name="L3556"></a><tt class="py-lineno">3556</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">a</tt> </tt>
</div><a name="L3557"></a><tt class="py-lineno">3557</tt>  <tt class="py-line"> </tt>
<a name="L3558"></a><tt class="py-lineno">3558</tt>  <tt class="py-line"> </tt>
<a name="L3559"></a><tt class="py-lineno">3559</tt>  <tt class="py-line"> </tt>
<a name="uu_encodestring"></a><div id="uu_encodestring-def"><a name="L3560"></a><tt class="py-lineno">3560</tt> <a class="py-toggle" href="#" id="uu_encodestring-toggle" onclick="return toggle('uu_encodestring');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#uu_encodestring">uu_encodestring</a><tt class="py-op">(</tt><tt class="py-param">text</tt><tt class="py-op">,</tt> <tt class="py-param">compress</tt><tt class="py-op">=</tt><tt id="link-1151" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-1151', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="uu_encodestring-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="uu_encodestring-expanded"><a name="L3561"></a><tt class="py-lineno">3561</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3562"></a><tt class="py-lineno">3562</tt>  <tt class="py-line"><tt class="py-docstring">    from http://effbot.org/librarybook/uu.htm</tt> </tt>
<a name="L3563"></a><tt class="py-lineno">3563</tt>  <tt class="py-line"><tt class="py-docstring">    seb added bz2 compression</tt> </tt>
<a name="L3564"></a><tt class="py-lineno">3564</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3565"></a><tt class="py-lineno">3565</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">StringIO</tt><tt class="py-op">,</tt> <tt class="py-name">uu</tt><tt class="py-op">,</tt> <tt class="py-name">bz2</tt> </tt>
<a name="L3566"></a><tt class="py-lineno">3566</tt>  <tt class="py-line">    <tt class="py-name">fin</tt> <tt class="py-op">=</tt> <tt class="py-name">StringIO</tt><tt class="py-op">.</tt><tt class="py-name">StringIO</tt><tt class="py-op">(</tt><tt class="py-name">bz2</tt><tt class="py-op">.</tt><tt class="py-name">compress</tt><tt class="py-op">(</tt><tt class="py-name">text</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L3567"></a><tt class="py-lineno">3567</tt>  <tt class="py-line">    <tt class="py-name">fout</tt> <tt class="py-op">=</tt> <tt class="py-name">StringIO</tt><tt class="py-op">.</tt><tt class="py-name">StringIO</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3568"></a><tt class="py-lineno">3568</tt>  <tt class="py-line">    <tt class="py-name">uu</tt><tt class="py-op">.</tt><tt class="py-name">encode</tt><tt class="py-op">(</tt><tt class="py-name">fin</tt><tt class="py-op">,</tt> <tt class="py-name">fout</tt><tt class="py-op">)</tt> </tt>
<a name="L3569"></a><tt class="py-lineno">3569</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">fout</tt><tt class="py-op">.</tt><tt class="py-name">getvalue</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L3570"></a><tt class="py-lineno">3570</tt>  <tt class="py-line"> </tt>
<a name="uu_decodestring"></a><div id="uu_decodestring-def"><a name="L3571"></a><tt class="py-lineno">3571</tt> <a class="py-toggle" href="#" id="uu_decodestring-toggle" onclick="return toggle('uu_decodestring');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#uu_decodestring">uu_decodestring</a><tt class="py-op">(</tt><tt class="py-param">text</tt><tt class="py-op">,</tt> <tt class="py-param">decompress</tt><tt class="py-op">=</tt><tt id="link-1152" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-1152', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="uu_decodestring-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="uu_decodestring-expanded"><a name="L3572"></a><tt class="py-lineno">3572</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3573"></a><tt class="py-lineno">3573</tt>  <tt class="py-line"><tt class="py-docstring">    from http://effbot.org/librarybook/uu.htm</tt> </tt>
<a name="L3574"></a><tt class="py-lineno">3574</tt>  <tt class="py-line"><tt class="py-docstring">    seb added bz2 compression</tt> </tt>
<a name="L3575"></a><tt class="py-lineno">3575</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3576"></a><tt class="py-lineno">3576</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">StringIO</tt><tt class="py-op">,</tt> <tt class="py-name">uu</tt><tt class="py-op">,</tt> <tt class="py-name">bz2</tt> </tt>
<a name="L3577"></a><tt class="py-lineno">3577</tt>  <tt class="py-line">    <tt class="py-name">fin</tt> <tt class="py-op">=</tt> <tt class="py-name">StringIO</tt><tt class="py-op">.</tt><tt class="py-name">StringIO</tt><tt class="py-op">(</tt><tt class="py-name">text</tt><tt class="py-op">)</tt> </tt>
<a name="L3578"></a><tt class="py-lineno">3578</tt>  <tt class="py-line">    <tt class="py-name">fout</tt> <tt class="py-op">=</tt> <tt class="py-name">StringIO</tt><tt class="py-op">.</tt><tt class="py-name">StringIO</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3579"></a><tt class="py-lineno">3579</tt>  <tt class="py-line">    <tt class="py-name">uu</tt><tt class="py-op">.</tt><tt class="py-name">decode</tt><tt class="py-op">(</tt><tt class="py-name">fin</tt><tt class="py-op">,</tt> <tt class="py-name">fout</tt><tt class="py-op">)</tt> </tt>
<a name="L3580"></a><tt class="py-lineno">3580</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">bz2</tt><tt class="py-op">.</tt><tt class="py-name">decompress</tt><tt class="py-op">(</tt><tt class="py-name">fout</tt><tt class="py-op">.</tt><tt class="py-name">getvalue</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L3581"></a><tt class="py-lineno">3581</tt>  <tt class="py-line"> </tt>
<a name="L3582"></a><tt class="py-lineno">3582</tt>  <tt class="py-line"> </tt>
<a name="grep"></a><div id="grep-def"><a name="L3583"></a><tt class="py-lineno">3583</tt> <a class="py-toggle" href="#" id="grep-toggle" onclick="return toggle('grep');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#grep">grep</a><tt class="py-op">(</tt><tt class="py-param">pattern</tt><tt class="py-op">,</tt> <tt class="py-op">*</tt><tt class="py-param">files</tt><tt class="py-op">)</tt><tt class="py-op">:</tt><tt class="py-comment"># , retList=False):</tt> </tt>
</div><a name="L3584"></a><tt class="py-lineno">3584</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3585"></a><tt class="py-lineno">3585</tt>  <tt class="py-line"><tt class="py-docstring">    emulate grep-functionality</tt> </tt>
<a name="L3586"></a><tt class="py-lineno">3586</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3587"></a><tt class="py-lineno">3587</tt>  <tt class="py-line"><tt class="py-docstring">    #if retList:</tt> </tt>
<a name="L3588"></a><tt class="py-lineno">3588</tt>  <tt class="py-line"><tt class="py-docstring">        return tuple list of (file, lineNo, lineText)-tuple</tt> </tt>
<a name="L3589"></a><tt class="py-lineno">3589</tt>  <tt class="py-line"><tt class="py-docstring">    #else:</tt> </tt>
<a name="L3590"></a><tt class="py-lineno">3590</tt>  <tt class="py-line"><tt class="py-docstring">    #    print familiar output to stdout</tt> </tt>
<a name="L3591"></a><tt class="py-lineno">3591</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3592"></a><tt class="py-lineno">3592</tt>  <tt class="py-line"><tt class="py-docstring">    posted by Fredrik Lundh, October 25th, 2005</tt> </tt>
<a name="L3593"></a><tt class="py-lineno">3593</tt>  <tt class="py-line"><tt class="py-docstring">    http://bytes.com/forum/thread169012.html</tt> </tt>
<a name="L3594"></a><tt class="py-lineno">3594</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3595"></a><tt class="py-lineno">3595</tt>  <tt class="py-line">    <tt class="py-comment">#if retList:</tt> </tt>
<a name="L3596"></a><tt class="py-lineno">3596</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">ret</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L3597"></a><tt class="py-lineno">3597</tt>  <tt class="py-line">    <tt class="py-name">search</tt> <tt class="py-op">=</tt> <tt class="py-name">re</tt><tt class="py-op">.</tt><tt class="py-name">compile</tt><tt class="py-op">(</tt><tt class="py-name">pattern</tt><tt class="py-op">)</tt><tt class="py-op">.</tt><tt class="py-name">search</tt> </tt>
<a name="L3598"></a><tt class="py-lineno">3598</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">file</tt> <tt class="py-keyword">in</tt> <tt class="py-name">files</tt><tt class="py-op">:</tt> </tt>
<a name="L3599"></a><tt class="py-lineno">3599</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">index</tt><tt class="py-op">,</tt> <tt class="py-name">line</tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt id="link-1153" class="py-name"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-1153', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">file</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3600"></a><tt class="py-lineno">3600</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">search</tt><tt class="py-op">(</tt><tt class="py-name">line</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3601"></a><tt class="py-lineno">3601</tt>  <tt class="py-line">                <tt class="py-comment">#if retList:</tt> </tt>
<a name="L3602"></a><tt class="py-lineno">3602</tt>  <tt class="py-line"><tt class="py-comment"></tt>                <tt class="py-name">ret</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt> <tt class="py-op">(</tt><tt class="py-name">file</tt><tt class="py-op">,</tt> <tt class="py-name">str</tt><tt class="py-op">(</tt><tt class="py-name">index</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">line</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
<a name="L3603"></a><tt class="py-lineno">3603</tt>  <tt class="py-line">                <tt class="py-comment">#else:</tt> </tt>
<a name="L3604"></a><tt class="py-lineno">3604</tt>  <tt class="py-line"><tt class="py-comment"></tt>                <tt class="py-comment">#    print ":".join((file, str(index+1), line[:-1]))</tt> </tt>
<a name="L3605"></a><tt class="py-lineno">3605</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#if retList:</tt> </tt>
<a name="L3606"></a><tt class="py-lineno">3606</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-name">fns</tt> <tt class="py-op">=</tt> <tt class="py-string">'_%0'</tt> <tt class="py-op">+</tt> <tt class="py-string">'%d'</tt><tt class="py-op">%</tt><tt class="py-op">(</tt><tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1154" class="py-name"><a title="Priithon.mandel.log10
Priithon.plt.interface.log10
Priithon.plt.log10
Priithon.plt.plot_objects.log10
Priithon.plt.plot_utility.log10
Priithon.plt.wxplt.log10" class="py-name" href="#" onclick="return doclink('link-1154', 'log10', 'link-875');">log10</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt><tt class="py-string">'d'</tt> </tt>
<a name="L3607"></a><tt class="py-lineno">3607</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">ret</tt> </tt>
</div><a name="L3608"></a><tt class="py-lineno">3608</tt>  <tt class="py-line"> </tt>
<a name="L3609"></a><tt class="py-lineno">3609</tt>  <tt class="py-line"> </tt>
<a name="pathPrependToFilename"></a><div id="pathPrependToFilename-def"><a name="L3610"></a><tt class="py-lineno">3610</tt> <a class="py-toggle" href="#" id="pathPrependToFilename-toggle" onclick="return toggle('pathPrependToFilename');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#pathPrependToFilename">pathPrependToFilename</a><tt class="py-op">(</tt><tt class="py-param">path</tt><tt class="py-op">,</tt> <tt class="py-param">prefix</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="pathPrependToFilename-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="pathPrependToFilename-expanded"><a name="L3611"></a><tt class="py-lineno">3611</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3612"></a><tt class="py-lineno">3612</tt>  <tt class="py-line"><tt class="py-docstring">    given filename path containing multiple parent folders</tt> </tt>
<a name="L3613"></a><tt class="py-lineno">3613</tt>  <tt class="py-line"><tt class="py-docstring">    change only the last "file name" part by prepending `prefix`;</tt> </tt>
<a name="L3614"></a><tt class="py-lineno">3614</tt>  <tt class="py-line"><tt class="py-docstring">    keep all parent folder names unchanced</tt> </tt>
<a name="L3615"></a><tt class="py-lineno">3615</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3616"></a><tt class="py-lineno">3616</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">os</tt> </tt>
<a name="L3617"></a><tt class="py-lineno">3617</tt>  <tt class="py-line">    <tt class="py-name">f</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-name">path</tt><tt class="py-op">)</tt> </tt>
<a name="L3618"></a><tt class="py-lineno">3618</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt> <tt class="py-op">*</tt><tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> <tt class="py-op">+</tt> <tt class="py-op">(</tt><tt class="py-name">prefix</tt><tt class="py-op">+</tt><tt class="py-name">f</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> <tt class="py-op">)</tt> </tt>
</div><a name="L3619"></a><tt class="py-lineno">3619</tt>  <tt class="py-line"> </tt>
<a name="path_mkdir"></a><div id="path_mkdir-def"><a name="L3620"></a><tt class="py-lineno">3620</tt> <a class="py-toggle" href="#" id="path_mkdir-toggle" onclick="return toggle('path_mkdir');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#path_mkdir">path_mkdir</a><tt class="py-op">(</tt><tt class="py-param">newdir</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="path_mkdir-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="path_mkdir-expanded"><a name="L3621"></a><tt class="py-lineno">3621</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3622"></a><tt class="py-lineno">3622</tt>  <tt class="py-line"><tt class="py-docstring">    works the way a good mkdir should :)</tt> </tt>
<a name="L3623"></a><tt class="py-lineno">3623</tt>  <tt class="py-line"><tt class="py-docstring">    - already exists, silently complete</tt> </tt>
<a name="L3624"></a><tt class="py-lineno">3624</tt>  <tt class="py-line"><tt class="py-docstring">    - regular file in the way, raise an exception</tt> </tt>
<a name="L3625"></a><tt class="py-lineno">3625</tt>  <tt class="py-line"><tt class="py-docstring">    - parent directory(ies) does not exist, make them as well</tt> </tt>
<a name="L3626"></a><tt class="py-lineno">3626</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3627"></a><tt class="py-lineno">3627</tt>  <tt class="py-line"><tt class="py-docstring">    Recipe 82465: a friendly mkdir() </tt> </tt>
<a name="L3628"></a><tt class="py-lineno">3628</tt>  <tt class="py-line"><tt class="py-docstring">    http://code.activestate.com/recipes/82465/</tt> </tt>
<a name="L3629"></a><tt class="py-lineno">3629</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3630"></a><tt class="py-lineno">3630</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">os</tt> </tt>
<a name="L3631"></a><tt class="py-lineno">3631</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">isdir</tt><tt class="py-op">(</tt><tt class="py-name">newdir</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3632"></a><tt class="py-lineno">3632</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> </tt>
<a name="L3633"></a><tt class="py-lineno">3633</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">isfile</tt><tt class="py-op">(</tt><tt class="py-name">newdir</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3634"></a><tt class="py-lineno">3634</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">OSError</tt><tt class="py-op">(</tt><tt class="py-string">"a file with the same name as the desired "</tt> \ </tt>
<a name="L3635"></a><tt class="py-lineno">3635</tt>  <tt class="py-line">                      <tt class="py-string">"dir, '%s', already exists."</tt> <tt class="py-op">%</tt> <tt class="py-name">newdir</tt><tt class="py-op">)</tt> </tt>
<a name="L3636"></a><tt class="py-lineno">3636</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3637"></a><tt class="py-lineno">3637</tt>  <tt class="py-line">        <tt class="py-name">head</tt><tt class="py-op">,</tt> <tt class="py-name">tail</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">split</tt><tt class="py-op">(</tt><tt class="py-name">newdir</tt><tt class="py-op">)</tt> </tt>
<a name="L3638"></a><tt class="py-lineno">3638</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">head</tt> <tt class="py-keyword">and</tt> <tt class="py-keyword">not</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">isdir</tt><tt class="py-op">(</tt><tt class="py-name">head</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3639"></a><tt class="py-lineno">3639</tt>  <tt class="py-line">            <tt id="link-1155" class="py-name" targets="Function Priithon.useful.path_mkdir()=Priithon.useful-module.html#path_mkdir"><a title="Priithon.useful.path_mkdir" class="py-name" href="#" onclick="return doclink('link-1155', 'path_mkdir', 'link-1155');">path_mkdir</a></tt><tt class="py-op">(</tt><tt class="py-name">head</tt><tt class="py-op">)</tt> </tt>
<a name="L3640"></a><tt class="py-lineno">3640</tt>  <tt class="py-line">        <tt class="py-comment">#print "_mkdir %s" % repr(newdir)</tt> </tt>
<a name="L3641"></a><tt class="py-lineno">3641</tt>  <tt class="py-line"><tt class="py-comment"></tt>        <tt class="py-keyword">if</tt> <tt class="py-name">tail</tt><tt class="py-op">:</tt> </tt>
<a name="L3642"></a><tt class="py-lineno">3642</tt>  <tt class="py-line">            <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">mkdir</tt><tt class="py-op">(</tt><tt class="py-name">newdir</tt><tt class="py-op">)</tt> </tt>
</div><a name="L3643"></a><tt class="py-lineno">3643</tt>  <tt class="py-line"> </tt>
<a name="sgn"></a><div id="sgn-def"><a name="L3644"></a><tt class="py-lineno">3644</tt> <a class="py-toggle" href="#" id="sgn-toggle" onclick="return toggle('sgn');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#sgn">sgn</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="sgn-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="sgn-expanded"><a name="L3645"></a><tt class="py-lineno">3645</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1156" class="py-name" targets="Variable Priithon.mandel.sign=Priithon.mandel-module.html#sign,Variable Priithon.plt.interface.sign=Priithon.plt.interface-module.html#sign,Variable Priithon.plt.plot_objects.sign=Priithon.plt.plot_objects-module.html#sign,Variable Priithon.plt.plot_utility.sign=Priithon.plt.plot_utility-module.html#sign,Variable Priithon.plt.sign=Priithon.plt-module.html#sign,Variable Priithon.plt.wxplt.sign=Priithon.plt.wxplt-module.html#sign"><a title="Priithon.mandel.sign
Priithon.plt.interface.sign
Priithon.plt.plot_objects.sign
Priithon.plt.plot_utility.sign
Priithon.plt.sign
Priithon.plt.wxplt.sign" class="py-name" href="#" onclick="return doclink('link-1156', 'sign', 'link-1156');">sign</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
</div><a name="L3646"></a><tt class="py-lineno">3646</tt>  <tt class="py-line"> </tt>
<a name="binaryRepr"></a><div id="binaryRepr-def"><a name="L3647"></a><tt class="py-lineno">3647</tt> <a class="py-toggle" href="#" id="binaryRepr-toggle" onclick="return toggle('binaryRepr');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#binaryRepr">binaryRepr</a><tt class="py-op">(</tt><tt class="py-param">x</tt><tt class="py-op">,</tt> <tt class="py-param">count</tt><tt class="py-op">=</tt><tt class="py-number">8</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="binaryRepr-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="binaryRepr-expanded"><a name="L3648"></a><tt class="py-lineno">3648</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3649"></a><tt class="py-lineno">3649</tt>  <tt class="py-line"><tt class="py-docstring">    Integer to "binary string" ("101011")</tt> </tt>
<a name="L3650"></a><tt class="py-lineno">3650</tt>  <tt class="py-line"><tt class="py-docstring">    returns string of length count containing '0's and '1'</tt> </tt>
<a name="L3651"></a><tt class="py-lineno">3651</tt>  <tt class="py-line"><tt class="py-docstring">    building up the "binary representation" of x</tt> </tt>
<a name="L3652"></a><tt class="py-lineno">3652</tt>  <tt class="py-line"><tt class="py-docstring">    Count is number of bits</tt> </tt>
<a name="L3653"></a><tt class="py-lineno">3653</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L3654"></a><tt class="py-lineno">3654</tt>  <tt class="py-line"><tt class="py-docstring">    Note: the inverse operation is done by int(xxx, 2)</tt> </tt>
<a name="L3655"></a><tt class="py-lineno">3655</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3656"></a><tt class="py-lineno">3656</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-string">""</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-keyword">lambda</tt> <tt id="link-1157" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1157', 'i', 'link-65');">i</a></tt><tt class="py-op">:</tt><tt class="py-name">str</tt><tt class="py-op">(</tt><tt class="py-op">(</tt><tt id="link-1158" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1158', 'x', 'link-481');">x</a></tt><tt class="py-op">&gt;&gt;</tt><tt id="link-1159" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1159', 'i', 'link-65');">i</a></tt><tt class="py-op">)</tt><tt class="py-op">&amp;</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt id="link-1160" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1160', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">count</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L3657"></a><tt class="py-lineno">3657</tt>  <tt class="py-line">     </tt>
<a name="L3658"></a><tt class="py-lineno">3658</tt>  <tt class="py-line"> </tt>
<a name="L3659"></a><tt class="py-lineno">3659</tt>  <tt class="py-line"> </tt>
<a name="L3660"></a><tt class="py-lineno">3660</tt>  <tt class="py-line"> </tt>
<a name="L3661"></a><tt class="py-lineno">3661</tt>  <tt class="py-line"> </tt>
<a name="L3662"></a><tt class="py-lineno">3662</tt>  <tt class="py-line"><tt class="py-comment">##some fundtions from</tt> </tt>
<a name="L3663"></a><tt class="py-lineno">3663</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">## http://wiki.python.org/moin/PythonDecoratorLibrary</tt> </tt>
<a name="L3664"></a><tt class="py-lineno">3664</tt>  <tt class="py-line"><tt class="py-comment"></tt><tt class="py-comment">##</tt> </tt>
<a name="deco_simple_decorator"></a><div id="deco_simple_decorator-def"><a name="L3665"></a><tt class="py-lineno">3665</tt> <a class="py-toggle" href="#" id="deco_simple_decorator-toggle" onclick="return toggle('deco_simple_decorator');">-</a><tt class="py-line"><tt class="py-comment"></tt><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#deco_simple_decorator">deco_simple_decorator</a><tt class="py-op">(</tt><tt class="py-param">decorator</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="deco_simple_decorator-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="deco_simple_decorator-expanded"><a name="L3666"></a><tt class="py-lineno">3666</tt>  <tt class="py-line">    <tt class="py-docstring">"""This decorator can be used to turn simple functions</tt> </tt>
<a name="L3667"></a><tt class="py-lineno">3667</tt>  <tt class="py-line"><tt class="py-docstring">    into well-behaved decorators, so long as the decorators</tt> </tt>
<a name="L3668"></a><tt class="py-lineno">3668</tt>  <tt class="py-line"><tt class="py-docstring">    are fairly simple. If a decorator expects a function and</tt> </tt>
<a name="L3669"></a><tt class="py-lineno">3669</tt>  <tt class="py-line"><tt class="py-docstring">    returns a function (no descriptors), and if it doesn't</tt> </tt>
<a name="L3670"></a><tt class="py-lineno">3670</tt>  <tt class="py-line"><tt class="py-docstring">    modify function attributes or docstring, then it is</tt> </tt>
<a name="L3671"></a><tt class="py-lineno">3671</tt>  <tt class="py-line"><tt class="py-docstring">    eligible to use this. Simply apply @simple_decorator to</tt> </tt>
<a name="L3672"></a><tt class="py-lineno">3672</tt>  <tt class="py-line"><tt class="py-docstring">    your decorator and it will automatically preserve the</tt> </tt>
<a name="L3673"></a><tt class="py-lineno">3673</tt>  <tt class="py-line"><tt class="py-docstring">    docstring and function attributes of functions to which</tt> </tt>
<a name="L3674"></a><tt class="py-lineno">3674</tt>  <tt class="py-line"><tt class="py-docstring">    it is applied.</tt> </tt>
<a name="L3675"></a><tt class="py-lineno">3675</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3676"></a><tt class="py-lineno">3676</tt>  <tt class="py-line"><tt class="py-docstring">    from  http://wiki.python.org/moin/PythonDecoratorLibrary</tt> </tt>
<a name="L3677"></a><tt class="py-lineno">3677</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3678"></a><tt class="py-lineno">3678</tt>  <tt class="py-line">    <tt class="py-keyword">def</tt> <tt class="py-def-name">new_decorator</tt><tt class="py-op">(</tt><tt class="py-param">f</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3679"></a><tt class="py-lineno">3679</tt>  <tt class="py-line">        <tt class="py-name">g</tt> <tt class="py-op">=</tt> <tt class="py-name">decorator</tt><tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">)</tt> </tt>
<a name="L3680"></a><tt class="py-lineno">3680</tt>  <tt class="py-line">        <tt class="py-name">g</tt><tt class="py-op">.</tt><tt class="py-name">__name__</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt class="py-name">__name__</tt> </tt>
<a name="L3681"></a><tt class="py-lineno">3681</tt>  <tt class="py-line">        <tt class="py-name">g</tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">=</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> </tt>
<a name="L3682"></a><tt class="py-lineno">3682</tt>  <tt class="py-line">        <tt class="py-name">g</tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt><tt class="py-op">.</tt><tt id="link-1161" class="py-name"><a title="Priithon.plt.wxplt.plot_canvas.update
Priithon.plt.wxplt.plot_frame.update" class="py-name" href="#" onclick="return doclink('link-1161', 'update', 'link-95');">update</a></tt><tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt><tt class="py-op">)</tt> </tt>
<a name="L3683"></a><tt class="py-lineno">3683</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">g</tt> </tt>
</div><a name="L3684"></a><tt class="py-lineno">3684</tt>  <tt class="py-line">    <tt class="py-comment"># Now a few lines needed to make simple_decorator itself</tt> </tt>
<a name="L3685"></a><tt class="py-lineno">3685</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># be a well-behaved decorator.</tt> </tt>
<a name="L3686"></a><tt class="py-lineno">3686</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">new_decorator</tt><tt class="py-op">.</tt><tt class="py-name">__name__</tt> <tt class="py-op">=</tt> <tt class="py-name">decorator</tt><tt class="py-op">.</tt><tt class="py-name">__name__</tt> </tt>
<a name="L3687"></a><tt class="py-lineno">3687</tt>  <tt class="py-line">    <tt class="py-name">new_decorator</tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> <tt class="py-op">=</tt> <tt class="py-name">decorator</tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> </tt>
<a name="L3688"></a><tt class="py-lineno">3688</tt>  <tt class="py-line">    <tt class="py-name">new_decorator</tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt><tt class="py-op">.</tt><tt id="link-1162" class="py-name"><a title="Priithon.plt.wxplt.plot_canvas.update
Priithon.plt.wxplt.plot_frame.update" class="py-name" href="#" onclick="return doclink('link-1162', 'update', 'link-95');">update</a></tt><tt class="py-op">(</tt><tt class="py-name">decorator</tt><tt class="py-op">.</tt><tt class="py-name">__dict__</tt><tt class="py-op">)</tt> </tt>
<a name="L3689"></a><tt class="py-lineno">3689</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">new_decorator</tt> </tt>
</div><a name="L3690"></a><tt class="py-lineno">3690</tt>  <tt class="py-line"> </tt>
<a name="L3691"></a><tt class="py-lineno">3691</tt>  <tt class="py-line"><tt class="py-string">'''</tt> </tt>
<a name="L3692"></a><tt class="py-lineno">3692</tt>  <tt class="py-line"><tt class="py-string">class deco_memoized(object):</tt> </tt>
<a name="L3693"></a><tt class="py-lineno">3693</tt>  <tt class="py-line"><tt class="py-string">   """Decorator that caches a function's return value each time it is called.</tt> </tt>
<a name="L3694"></a><tt class="py-lineno">3694</tt>  <tt class="py-line"><tt class="py-string">   If called later with the same arguments, the cached value is returned, and</tt> </tt>
<a name="L3695"></a><tt class="py-lineno">3695</tt>  <tt class="py-line"><tt class="py-string">   not re-evaluated.</tt> </tt>
<a name="L3696"></a><tt class="py-lineno">3696</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3697"></a><tt class="py-lineno">3697</tt>  <tt class="py-line"><tt class="py-string">   from  http://wiki.python.org/moin/PythonDecoratorLibrary</tt> </tt>
<a name="L3698"></a><tt class="py-lineno">3698</tt>  <tt class="py-line"><tt class="py-string">   """</tt> </tt>
<a name="L3699"></a><tt class="py-lineno">3699</tt>  <tt class="py-line"><tt class="py-string">   def __init__(self, func):</tt> </tt>
<a name="L3700"></a><tt class="py-lineno">3700</tt>  <tt class="py-line"><tt class="py-string">      self.func = func</tt> </tt>
<a name="L3701"></a><tt class="py-lineno">3701</tt>  <tt class="py-line"><tt class="py-string">      self.memoized_cache = {}</tt> </tt>
<a name="L3702"></a><tt class="py-lineno">3702</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3703"></a><tt class="py-lineno">3703</tt>  <tt class="py-line"><tt class="py-string">      self.__call__.im_func.func_doc = func.__doc__</tt> </tt>
<a name="L3704"></a><tt class="py-lineno">3704</tt>  <tt class="py-line"><tt class="py-string">      self.__call__.im_func.func_name = func.__name__</tt> </tt>
<a name="L3705"></a><tt class="py-lineno">3705</tt>  <tt class="py-line"><tt class="py-string">      self.__call__.im_func.func_defaults = func.func_defaults</tt> </tt>
<a name="L3706"></a><tt class="py-lineno">3706</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L3707"></a><tt class="py-lineno">3707</tt>  <tt class="py-line"><tt class="py-string">   def __call__(self, *args):</tt> </tt>
<a name="L3708"></a><tt class="py-lineno">3708</tt>  <tt class="py-line"><tt class="py-string">      try:</tt> </tt>
<a name="L3709"></a><tt class="py-lineno">3709</tt>  <tt class="py-line"><tt class="py-string">         return self.memoized_cache[args]</tt> </tt>
<a name="L3710"></a><tt class="py-lineno">3710</tt>  <tt class="py-line"><tt class="py-string">      except KeyError:</tt> </tt>
<a name="L3711"></a><tt class="py-lineno">3711</tt>  <tt class="py-line"><tt class="py-string">         self.memoized_cache[args] = value = self.func(*args)</tt> </tt>
<a name="L3712"></a><tt class="py-lineno">3712</tt>  <tt class="py-line"><tt class="py-string">         return value</tt> </tt>
<a name="L3713"></a><tt class="py-lineno">3713</tt>  <tt class="py-line"><tt class="py-string">      except TypeError:</tt> </tt>
<a name="L3714"></a><tt class="py-lineno">3714</tt>  <tt class="py-line"><tt class="py-string">         # uncachable -- for instance, passing a list as an argument.</tt> </tt>
<a name="L3715"></a><tt class="py-lineno">3715</tt>  <tt class="py-line"><tt class="py-string">         # Better to not cache than to blow up entirely.</tt> </tt>
<a name="L3716"></a><tt class="py-lineno">3716</tt>  <tt class="py-line"><tt class="py-string">         return self.func(*args)</tt> </tt>
<a name="L3717"></a><tt class="py-lineno">3717</tt>  <tt class="py-line"><tt class="py-string">   def __repr__(self):</tt> </tt>
<a name="L3718"></a><tt class="py-lineno">3718</tt>  <tt class="py-line"><tt class="py-string">   #   """Return the function's docstring."""</tt> </tt>
<a name="L3719"></a><tt class="py-lineno">3719</tt>  <tt class="py-line"><tt class="py-string">   #   return self.func.__doc__</tt> </tt>
<a name="L3720"></a><tt class="py-lineno">3720</tt>  <tt class="py-line"><tt class="py-string">       return "&lt;memoized version of %r&gt;" %(self.func,)</tt> </tt>
<a name="L3721"></a><tt class="py-lineno">3721</tt>  <tt class="py-line"><tt class="py-string">   def __str__(self):</tt> </tt>
<a name="L3722"></a><tt class="py-lineno">3722</tt>  <tt class="py-line"><tt class="py-string">       return "&lt;memoized version of %s&gt;" %(self.func,)</tt> </tt>
<a name="L3723"></a><tt class="py-lineno">3723</tt>  <tt class="py-line"><tt class="py-string">'''</tt> </tt>
<a name="deco_memoized"></a><div id="deco_memoized-def"><a name="L3724"></a><tt class="py-lineno">3724</tt> <a class="py-toggle" href="#" id="deco_memoized-toggle" onclick="return toggle('deco_memoized');">-</a><tt class="py-line"><tt class="py-keyword">class</tt> <a class="py-def-name" href="Priithon.useful.deco_memoized-class.html">deco_memoized</a><tt class="py-op">(</tt><tt class="py-base-class">object</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="deco_memoized-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="deco_memoized-expanded"><a name="L3725"></a><tt class="py-lineno">3725</tt>  <tt class="py-line">   <tt class="py-docstring">"""Decorator that caches a function's return value each time it is called.</tt> </tt>
<a name="L3726"></a><tt class="py-lineno">3726</tt>  <tt class="py-line"><tt class="py-docstring">   If called later with the same arguments, the cached value is returned, and</tt> </tt>
<a name="L3727"></a><tt class="py-lineno">3727</tt>  <tt class="py-line"><tt class="py-docstring">   not re-evaluated.</tt> </tt>
<a name="L3728"></a><tt class="py-lineno">3728</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3729"></a><tt class="py-lineno">3729</tt>  <tt class="py-line"><tt class="py-docstring">   from  http://wiki.python.org/moin/PythonDecoratorLibrary</tt> </tt>
<a name="L3730"></a><tt class="py-lineno">3730</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3731"></a><tt class="py-lineno">3731</tt>  <tt class="py-line"><tt class="py-docstring">   seb 20100624: </tt> </tt>
<a name="L3732"></a><tt class="py-lineno">3732</tt>  <tt class="py-line"><tt class="py-docstring">   if cacheSize not None:</tt> </tt>
<a name="L3733"></a><tt class="py-lineno">3733</tt>  <tt class="py-line"><tt class="py-docstring">       hold no more than `cacheSize` results in cache</tt> </tt>
<a name="L3734"></a><tt class="py-lineno">3734</tt>  <tt class="py-line"><tt class="py-docstring">       this is useful to limit memory usage</tt> </tt>
<a name="L3735"></a><tt class="py-lineno">3735</tt>  <tt class="py-line"><tt class="py-docstring">       if more calls are made,</tt> </tt>
<a name="L3736"></a><tt class="py-lineno">3736</tt>  <tt class="py-line"><tt class="py-docstring">       cache is used in FIFO mode, i.e. oldest results are "forgotten" first</tt> </tt>
<a name="L3737"></a><tt class="py-lineno">3737</tt>  <tt class="py-line"><tt class="py-docstring">   """</tt> </tt>
<a name="deco_memoized.__init__"></a><div id="deco_memoized.__init__-def"><a name="L3738"></a><tt class="py-lineno">3738</tt> <a class="py-toggle" href="#" id="deco_memoized.__init__-toggle" onclick="return toggle('deco_memoized.__init__');">-</a><tt class="py-line">   <tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful.deco_memoized-class.html#__init__">__init__</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt> <tt class="py-param">cacheSize</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="deco_memoized.__init__-collapsed" style="display:none;" pad="++++" indent="+++++++"></div><div id="deco_memoized.__init__-expanded"><a name="L3739"></a><tt class="py-lineno">3739</tt>  <tt class="py-line">       <tt class="py-comment">#"""</tt> </tt>
<a name="L3740"></a><tt class="py-lineno">3740</tt>  <tt class="py-line"><tt class="py-comment"></tt>       <tt class="py-comment">#If there are decorator arguments, the function</tt> </tt>
<a name="L3741"></a><tt class="py-lineno">3741</tt>  <tt class="py-line"><tt class="py-comment"></tt>       <tt class="py-comment">#to be decorated is not passed to the constructor!</tt> </tt>
<a name="L3742"></a><tt class="py-lineno">3742</tt>  <tt class="py-line"><tt class="py-comment"></tt>       <tt class="py-comment">#"""</tt> </tt>
<a name="L3743"></a><tt class="py-lineno">3743</tt>  <tt class="py-line"><tt class="py-comment"></tt>       <tt class="py-keyword">assert</tt> <tt class="py-name">cacheSize</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">or</tt> <tt class="py-name">cacheSize</tt><tt class="py-op">&gt;=</tt><tt class="py-number">0</tt> </tt>
<a name="L3744"></a><tt class="py-lineno">3744</tt>  <tt class="py-line">       <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache</tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt> </tt>
<a name="L3745"></a><tt class="py-lineno">3745</tt>  <tt class="py-line">       <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_argsList</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> <tt class="py-comment"># seb</tt> </tt>
<a name="L3746"></a><tt class="py-lineno">3746</tt>  <tt class="py-line">       <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_maxLen</tt> <tt class="py-op">=</tt> <tt class="py-name">cacheSize</tt> </tt>
</div><a name="L3747"></a><tt class="py-lineno">3747</tt>  <tt class="py-line">        </tt>
<a name="deco_memoized._setCacheSize"></a><div id="deco_memoized._setCacheSize-def"><a name="L3748"></a><tt class="py-lineno">3748</tt> <a class="py-toggle" href="#" id="deco_memoized._setCacheSize-toggle" onclick="return toggle('deco_memoized._setCacheSize');">-</a><tt class="py-line">   <tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful.deco_memoized-class.html#_setCacheSize">_setCacheSize</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt> <tt class="py-param">cacheSize</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">clearNow</tt><tt class="py-op">=</tt><tt id="link-1163" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1163', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="deco_memoized._setCacheSize-collapsed" style="display:none;" pad="++++" indent="+++++++"></div><div id="deco_memoized._setCacheSize-expanded"><a name="L3749"></a><tt class="py-lineno">3749</tt>  <tt class="py-line">       <tt class="py-docstring">"""</tt> </tt>
<a name="L3750"></a><tt class="py-lineno">3750</tt>  <tt class="py-line"><tt class="py-docstring">       cacheSize = None --&gt; inifinite memoizing cache</tt> </tt>
<a name="L3751"></a><tt class="py-lineno">3751</tt>  <tt class="py-line"><tt class="py-docstring">       cacheSize = 0    --&gt; memoizing turned off (for testing !?)</tt> </tt>
<a name="L3752"></a><tt class="py-lineno">3752</tt>  <tt class="py-line"><tt class="py-docstring">       cacheSize &gt; 0    --&gt; memoizing used for up to cacheSize different arguments (limit used to save memory)</tt> </tt>
<a name="L3753"></a><tt class="py-lineno">3753</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3754"></a><tt class="py-lineno">3754</tt>  <tt class="py-line"><tt class="py-docstring">       if clearNow: clear cache completely now</tt> </tt>
<a name="L3755"></a><tt class="py-lineno">3755</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3756"></a><tt class="py-lineno">3756</tt>  <tt class="py-line"><tt class="py-docstring">       note: if cacheSize was None, setting to finite size will</tt> </tt>
<a name="L3757"></a><tt class="py-lineno">3757</tt>  <tt class="py-line"><tt class="py-docstring">             NOT adjust cacheSize, and the cache will always stay</tt> </tt>
<a name="L3758"></a><tt class="py-lineno">3758</tt>  <tt class="py-line"><tt class="py-docstring">             (by the current size) larger than the given value.</tt> </tt>
<a name="L3759"></a><tt class="py-lineno">3759</tt>  <tt class="py-line"><tt class="py-docstring">             unless you have clearNow=True, or until you call clearCache later </tt> </tt>
<a name="L3760"></a><tt class="py-lineno">3760</tt>  <tt class="py-line"><tt class="py-docstring">       """</tt> </tt>
<a name="L3761"></a><tt class="py-lineno">3761</tt>  <tt class="py-line">       <tt class="py-keyword">assert</tt> <tt class="py-name">cacheSize</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">or</tt> <tt class="py-name">cacheSize</tt><tt class="py-op">&gt;=</tt><tt class="py-number">0</tt> </tt>
<a name="L3762"></a><tt class="py-lineno">3762</tt>  <tt class="py-line">       <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_maxLen</tt> <tt class="py-op">=</tt> <tt class="py-name">cacheSize</tt> </tt>
<a name="L3763"></a><tt class="py-lineno">3763</tt>  <tt class="py-line">       <tt class="py-keyword">if</tt> <tt class="py-name">clearNow</tt><tt class="py-op">:</tt> </tt>
<a name="L3764"></a><tt class="py-lineno">3764</tt>  <tt class="py-line">           <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-1164" class="py-name" targets="Method Priithon.useful.deco_memoized._clearCache()=Priithon.useful.deco_memoized-class.html#_clearCache"><a title="Priithon.useful.deco_memoized._clearCache" class="py-name" href="#" onclick="return doclink('link-1164', '_clearCache', 'link-1164');">_clearCache</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3765"></a><tt class="py-lineno">3765</tt>  <tt class="py-line">       <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3766"></a><tt class="py-lineno">3766</tt>  <tt class="py-line">           <tt class="py-keyword">if</tt> <tt class="py-name">cacheSize</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3767"></a><tt class="py-lineno">3767</tt>  <tt class="py-line">               <tt class="py-keyword">while</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_argsList</tt><tt class="py-op">)</tt> <tt class="py-op">&gt;</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_maxLen</tt><tt class="py-op">:</tt> </tt>
<a name="L3768"></a><tt class="py-lineno">3768</tt>  <tt class="py-line">                   <tt class="py-keyword">del</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache</tt><tt class="py-op">[</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_argsList</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">]</tt> </tt>
<a name="L3769"></a><tt class="py-lineno">3769</tt>  <tt class="py-line">                   <tt class="py-keyword">del</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_argsList</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
</div><a name="deco_memoized._clearCache"></a><div id="deco_memoized._clearCache-def"><a name="L3770"></a><tt class="py-lineno">3770</tt> <a class="py-toggle" href="#" id="deco_memoized._clearCache-toggle" onclick="return toggle('deco_memoized._clearCache');">-</a><tt class="py-line">   <tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful.deco_memoized-class.html#_clearCache">_clearCache</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="deco_memoized._clearCache-collapsed" style="display:none;" pad="++++" indent="+++++++"></div><div id="deco_memoized._clearCache-expanded"><a name="L3771"></a><tt class="py-lineno">3771</tt>  <tt class="py-line">       <tt class="py-docstring">"""</tt> </tt>
<a name="L3772"></a><tt class="py-lineno">3772</tt>  <tt class="py-line"><tt class="py-docstring">       clear entire cache</tt> </tt>
<a name="L3773"></a><tt class="py-lineno">3773</tt>  <tt class="py-line"><tt class="py-docstring">       """</tt> </tt>
<a name="L3774"></a><tt class="py-lineno">3774</tt>  <tt class="py-line">       <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache</tt><tt class="py-op">.</tt><tt id="link-1165" class="py-name" targets="Method Priithon.py.shell.Shell.clear()=Priithon.py.shell.Shell-class.html#clear"><a title="Priithon.py.shell.Shell.clear" class="py-name" href="#" onclick="return doclink('link-1165', 'clear', 'link-1165');">clear</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L3775"></a><tt class="py-lineno">3775</tt>  <tt class="py-line">       <tt class="py-keyword">del</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_argsList</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
</div><a name="L3776"></a><tt class="py-lineno">3776</tt>  <tt class="py-line"> </tt>
<a name="deco_memoized.__call__"></a><div id="deco_memoized.__call__-def"><a name="L3777"></a><tt class="py-lineno">3777</tt> <a class="py-toggle" href="#" id="deco_memoized.__call__-toggle" onclick="return toggle('deco_memoized.__call__');">-</a><tt class="py-line">   <tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful.deco_memoized-class.html#__call__">__call__</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">,</tt> <tt class="py-param">func</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="deco_memoized.__call__-collapsed" style="display:none;" pad="++++" indent="+++++++"></div><div id="deco_memoized.__call__-expanded"><a name="L3778"></a><tt class="py-lineno">3778</tt>  <tt class="py-line">       <tt class="py-comment">#"""</tt> </tt>
<a name="L3779"></a><tt class="py-lineno">3779</tt>  <tt class="py-line"><tt class="py-comment"></tt>       <tt class="py-comment">#If there are decorator arguments, __call__() is only called</tt> </tt>
<a name="L3780"></a><tt class="py-lineno">3780</tt>  <tt class="py-line"><tt class="py-comment"></tt>       <tt class="py-comment">#once, as part of the decoration process! You can only give</tt> </tt>
<a name="L3781"></a><tt class="py-lineno">3781</tt>  <tt class="py-line"><tt class="py-comment"></tt>       <tt class="py-comment">#it a single argument, which is the function object.</tt> </tt>
<a name="L3782"></a><tt class="py-lineno">3782</tt>  <tt class="py-line"><tt class="py-comment"></tt>       <tt class="py-comment">#"""</tt> </tt>
<a name="L3783"></a><tt class="py-lineno">3783</tt>  <tt class="py-line"><tt class="py-comment"></tt>       <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">func</tt> <tt class="py-op">=</tt> <tt class="py-name">func</tt> </tt>
<a name="L3784"></a><tt class="py-lineno">3784</tt>  <tt class="py-line"> </tt>
<a name="L3785"></a><tt class="py-lineno">3785</tt>  <tt class="py-line">       <tt class="py-keyword">def</tt> <tt class="py-def-name">wrapped_f</tt><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-param">args</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3786"></a><tt class="py-lineno">3786</tt>  <tt class="py-line">           <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L3787"></a><tt class="py-lineno">3787</tt>  <tt class="py-line">               <tt class="py-keyword">return</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache</tt><tt class="py-op">[</tt><tt class="py-name">args</tt><tt class="py-op">]</tt> </tt>
<a name="L3788"></a><tt class="py-lineno">3788</tt>  <tt class="py-line">           <tt class="py-keyword">except</tt> <tt class="py-name">KeyError</tt><tt class="py-op">:</tt> </tt>
<a name="L3789"></a><tt class="py-lineno">3789</tt>  <tt class="py-line">               <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_maxLen</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3790"></a><tt class="py-lineno">3790</tt>  <tt class="py-line">                   <tt class="py-keyword">while</tt> <tt class="py-op">(</tt> </tt>
<a name="L3791"></a><tt class="py-lineno">3791</tt>  <tt class="py-line">                       <tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_maxLen</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt> <tt class="py-keyword">and</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_argsList</tt><tt class="py-op">)</tt><tt class="py-op">)</tt>  </tt>
<a name="L3792"></a><tt class="py-lineno">3792</tt>  <tt class="py-line">                       <tt class="py-keyword">or</tt> </tt>
<a name="L3793"></a><tt class="py-lineno">3793</tt>  <tt class="py-line">                       <tt class="py-op">(</tt> <tt class="py-number">0</tt> <tt class="py-op">&lt;</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_maxLen</tt> <tt class="py-op">&lt;</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_argsList</tt><tt class="py-op">)</tt><tt class="py-op">+</tt><tt class="py-number">1</tt> <tt class="py-op">)</tt> </tt>
<a name="L3794"></a><tt class="py-lineno">3794</tt>  <tt class="py-line">                       <tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3795"></a><tt class="py-lineno">3795</tt>  <tt class="py-line">                       <tt class="py-keyword">del</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache</tt><tt class="py-op">[</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_argsList</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> <tt class="py-op">]</tt> </tt>
<a name="L3796"></a><tt class="py-lineno">3796</tt>  <tt class="py-line">                       <tt class="py-keyword">del</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_argsList</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L3797"></a><tt class="py-lineno">3797</tt>  <tt class="py-line">               <tt class="py-name">value</tt> <tt class="py-op">=</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">func</tt><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-name">args</tt><tt class="py-op">)</tt> </tt>
<a name="L3798"></a><tt class="py-lineno">3798</tt>  <tt class="py-line">               <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_maxLen</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">or</tt> \ </tt>
<a name="L3799"></a><tt class="py-lineno">3799</tt>  <tt class="py-line">                       <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_maxLen</tt> <tt class="py-op">&gt;</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L3800"></a><tt class="py-lineno">3800</tt>  <tt class="py-line">                   <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L3801"></a><tt class="py-lineno">3801</tt>  <tt class="py-line">                       <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache</tt><tt class="py-op">[</tt><tt class="py-name">args</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">value</tt> </tt>
<a name="L3802"></a><tt class="py-lineno">3802</tt>  <tt class="py-line">                   <tt class="py-keyword">except</tt> <tt class="py-name">TypeError</tt><tt class="py-op">:</tt> </tt>
<a name="L3803"></a><tt class="py-lineno">3803</tt>  <tt class="py-line">                           <tt class="py-comment"># uncachable -- for instance, passing a list as an argument.</tt> </tt>
<a name="L3804"></a><tt class="py-lineno">3804</tt>  <tt class="py-line"><tt class="py-comment"></tt>                           <tt class="py-comment"># Better to not cache than to blow up entirely.</tt> </tt>
<a name="L3805"></a><tt class="py-lineno">3805</tt>  <tt class="py-line"><tt class="py-comment"></tt>                           <tt class="py-keyword">pass</tt> </tt>
<a name="L3806"></a><tt class="py-lineno">3806</tt>  <tt class="py-line">                   <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3807"></a><tt class="py-lineno">3807</tt>  <tt class="py-line">                       <tt class="py-keyword">if</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_maxLen</tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt><tt class="py-op">:</tt> </tt>
<a name="L3808"></a><tt class="py-lineno">3808</tt>  <tt class="py-line">                           <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_argsList</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">args</tt><tt class="py-op">)</tt> </tt>
<a name="L3809"></a><tt class="py-lineno">3809</tt>  <tt class="py-line">               <tt class="py-keyword">return</tt> <tt class="py-name">value</tt> </tt>
</div><a name="L3810"></a><tt class="py-lineno">3810</tt>  <tt class="py-line"> </tt>
<a name="L3811"></a><tt class="py-lineno">3811</tt>  <tt class="py-line">       <tt class="py-name">wrapped_f</tt><tt class="py-op">.</tt><tt class="py-name">func_doc</tt> <tt class="py-op">=</tt> <tt class="py-name">func</tt><tt class="py-op">.</tt><tt class="py-name">__doc__</tt> </tt>
<a name="L3812"></a><tt class="py-lineno">3812</tt>  <tt class="py-line">       <tt class="py-name">wrapped_f</tt><tt class="py-op">.</tt><tt class="py-name">func_name</tt> <tt class="py-op">=</tt> <tt class="py-name">func</tt><tt class="py-op">.</tt><tt class="py-name">__name__</tt> </tt>
<a name="L3813"></a><tt class="py-lineno">3813</tt>  <tt class="py-line">       <tt class="py-name">wrapped_f</tt><tt class="py-op">.</tt><tt class="py-name">func_defaults</tt> <tt class="py-op">=</tt> <tt class="py-name">func</tt><tt class="py-op">.</tt><tt class="py-name">func_defaults</tt> </tt>
<a name="L3814"></a><tt class="py-lineno">3814</tt>  <tt class="py-line">       <tt class="py-name">wrapped_f</tt><tt class="py-op">.</tt><tt class="py-name">_setMemoizeCacheSize</tt> <tt class="py-op">=</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-1166" class="py-name" targets="Method Priithon.useful.deco_memoized._setCacheSize()=Priithon.useful.deco_memoized-class.html#_setCacheSize"><a title="Priithon.useful.deco_memoized._setCacheSize" class="py-name" href="#" onclick="return doclink('link-1166', '_setCacheSize', 'link-1166');">_setCacheSize</a></tt> </tt>
<a name="L3815"></a><tt class="py-lineno">3815</tt>  <tt class="py-line">       <tt class="py-name">wrapped_f</tt><tt class="py-op">.</tt><tt class="py-name">_clearMemoizeCache</tt> <tt class="py-op">=</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt id="link-1167" class="py-name"><a title="Priithon.useful.deco_memoized._clearCache" class="py-name" href="#" onclick="return doclink('link-1167', '_clearCache', 'link-1164');">_clearCache</a></tt> </tt>
<a name="L3816"></a><tt class="py-lineno">3816</tt>  <tt class="py-line">       <tt class="py-name">wrapped_f</tt><tt class="py-op">.</tt><tt class="py-name">_memoized_cache</tt> <tt class="py-op">=</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache</tt> </tt>
<a name="L3817"></a><tt class="py-lineno">3817</tt>  <tt class="py-line">       <tt class="py-name">wrapped_f</tt><tt class="py-op">.</tt><tt class="py-name">_memoized_cache_argsList</tt> <tt class="py-op">=</tt> <tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">memoized_cache_argsList</tt> </tt>
<a name="L3818"></a><tt class="py-lineno">3818</tt>  <tt class="py-line">       <tt class="py-keyword">return</tt> <tt class="py-name">wrapped_f</tt> </tt>
</div><a name="L3819"></a><tt class="py-lineno">3819</tt>  <tt class="py-line"> </tt>
<a name="L3820"></a><tt class="py-lineno">3820</tt>  <tt class="py-line"> </tt>
<a name="deco_memoized.__repr__"></a><div id="deco_memoized.__repr__-def"><a name="L3821"></a><tt class="py-lineno">3821</tt> <a class="py-toggle" href="#" id="deco_memoized.__repr__-toggle" onclick="return toggle('deco_memoized.__repr__');">-</a><tt class="py-line">   <tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful.deco_memoized-class.html#__repr__">__repr__</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="deco_memoized.__repr__-collapsed" style="display:none;" pad="++++" indent="+++++++"></div><div id="deco_memoized.__repr__-expanded"><a name="L3822"></a><tt class="py-lineno">3822</tt>  <tt class="py-line">   <tt class="py-comment">#   """Return the function's docstring."""</tt> </tt>
<a name="L3823"></a><tt class="py-lineno">3823</tt>  <tt class="py-line"><tt class="py-comment"></tt>   <tt class="py-comment">#   return self.func.__doc__</tt> </tt>
<a name="L3824"></a><tt class="py-lineno">3824</tt>  <tt class="py-line"><tt class="py-comment"></tt>       <tt class="py-keyword">return</tt> <tt class="py-string">"&lt;memoized version of %r&gt;"</tt> <tt class="py-op">%</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">func</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> </tt>
</div><a name="deco_memoized.__str__"></a><div id="deco_memoized.__str__-def"><a name="L3825"></a><tt class="py-lineno">3825</tt> <a class="py-toggle" href="#" id="deco_memoized.__str__-toggle" onclick="return toggle('deco_memoized.__str__');">-</a><tt class="py-line">   <tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful.deco_memoized-class.html#__str__">__str__</a><tt class="py-op">(</tt><tt class="py-param">self</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="deco_memoized.__str__-collapsed" style="display:none;" pad="++++" indent="+++++++"></div><div id="deco_memoized.__str__-expanded"><a name="L3826"></a><tt class="py-lineno">3826</tt>  <tt class="py-line">       <tt class="py-keyword">return</tt> <tt class="py-string">"&lt;memoized version of %s&gt;"</tt> <tt class="py-op">%</tt><tt class="py-op">(</tt><tt class="py-name">self</tt><tt class="py-op">.</tt><tt class="py-name">func</tt><tt class="py-op">,</tt><tt class="py-op">)</tt> </tt>
</div></div><a name="L3827"></a><tt class="py-lineno">3827</tt>  <tt class="py-line"> </tt>
<a name="deco_addInstanceMethodTo"></a><div id="deco_addInstanceMethodTo-def"><a name="L3828"></a><tt class="py-lineno">3828</tt> <a class="py-toggle" href="#" id="deco_addInstanceMethodTo-toggle" onclick="return toggle('deco_addInstanceMethodTo');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#deco_addInstanceMethodTo">deco_addInstanceMethodTo</a><tt class="py-op">(</tt><tt class="py-param">instance</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="deco_addInstanceMethodTo-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="deco_addInstanceMethodTo-expanded"><a name="L3829"></a><tt class="py-lineno">3829</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3830"></a><tt class="py-lineno">3830</tt>  <tt class="py-line"><tt class="py-docstring">    Easy adding methods to a class instance</tt> </tt>
<a name="L3831"></a><tt class="py-lineno">3831</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3832"></a><tt class="py-lineno">3832</tt>  <tt class="py-line"><tt class="py-docstring">    from  http://wiki.python.org/moin/PythonDecoratorLibrary    </tt> </tt>
<a name="L3833"></a><tt class="py-lineno">3833</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3834"></a><tt class="py-lineno">3834</tt>  <tt class="py-line">    <tt class="py-keyword">def</tt> <tt class="py-def-name">decorator</tt><tt class="py-op">(</tt><tt class="py-param">f</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3835"></a><tt class="py-lineno">3835</tt>  <tt class="py-line">        <tt class="py-keyword">import</tt> <tt id="link-1168" class="py-name" targets="Method Priithon.py.buffer.Buffer.new()=Priithon.py.buffer.Buffer-class.html#new"><a title="Priithon.py.buffer.Buffer.new" class="py-name" href="#" onclick="return doclink('link-1168', 'new', 'link-1168');">new</a></tt> </tt>
<a name="L3836"></a><tt class="py-lineno">3836</tt>  <tt class="py-line">        <tt class="py-name">f</tt> <tt class="py-op">=</tt> <tt id="link-1169" class="py-name"><a title="Priithon.py.buffer.Buffer.new" class="py-name" href="#" onclick="return doclink('link-1169', 'new', 'link-1168');">new</a></tt><tt class="py-op">.</tt><tt class="py-name">instancemethod</tt><tt class="py-op">(</tt><tt class="py-name">f</tt><tt class="py-op">,</tt> <tt class="py-name">instance</tt><tt class="py-op">,</tt> <tt class="py-name">instance</tt><tt class="py-op">.</tt><tt class="py-name">__class__</tt><tt class="py-op">)</tt> </tt>
<a name="L3837"></a><tt class="py-lineno">3837</tt>  <tt class="py-line">        <tt class="py-name">setattr</tt><tt class="py-op">(</tt><tt class="py-name">instance</tt><tt class="py-op">,</tt> <tt class="py-name">f</tt><tt class="py-op">.</tt><tt class="py-name">func_name</tt><tt class="py-op">,</tt> <tt class="py-name">f</tt><tt class="py-op">)</tt> </tt>
<a name="L3838"></a><tt class="py-lineno">3838</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">f</tt> </tt>
</div><a name="L3839"></a><tt class="py-lineno">3839</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">decorator</tt> </tt>
</div><a name="L3840"></a><tt class="py-lineno">3840</tt>  <tt class="py-line"> </tt>
<a name="L3841"></a><tt class="py-lineno">3841</tt>  <tt class="py-line"><tt class="py-comment">## end http://wiki.python.org/moin/PythonDecoratorLibrary</tt> </tt>
<a name="L3842"></a><tt class="py-lineno">3842</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="fib"></a><div id="fib-def"><a name="L3843"></a><tt class="py-lineno">3843</tt> <a class="py-toggle" href="#" id="fib-toggle" onclick="return toggle('fib');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#fib">fib</a><tt class="py-op">(</tt><tt class="py-param">max</tt><tt class="py-op">=</tt><tt class="py-number">100</tt><tt class="py-op">,</tt> <tt class="py-param">startWith0</tt><tt class="py-op">=</tt><tt id="link-1170" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-1170', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="fib-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="fib-expanded"><a name="L3844"></a><tt class="py-lineno">3844</tt>  <tt class="py-line">    <tt class="py-docstring">"""uses generator to iterate over sequence of Fibonacci numbers</tt> </tt>
<a name="L3845"></a><tt class="py-lineno">3845</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3846"></a><tt class="py-lineno">3846</tt>  <tt class="py-line">    <tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-number">1</tt> </tt>
<a name="L3847"></a><tt class="py-lineno">3847</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">startWith0</tt><tt class="py-op">:</tt> </tt>
<a name="L3848"></a><tt class="py-lineno">3848</tt>  <tt class="py-line">        <tt class="py-keyword">yield</tt> <tt class="py-name">a</tt> </tt>
<a name="L3849"></a><tt class="py-lineno">3849</tt>  <tt class="py-line">    <tt class="py-keyword">while</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L3850"></a><tt class="py-lineno">3850</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">b</tt> <tt class="py-op">&gt;</tt> <tt id="link-1171" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-1171', 'max', 'link-172');">max</a></tt><tt class="py-op">:</tt> </tt>
<a name="L3851"></a><tt class="py-lineno">3851</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> </tt>
<a name="L3852"></a><tt class="py-lineno">3852</tt>  <tt class="py-line">        <tt class="py-keyword">yield</tt> <tt class="py-name">b</tt> </tt>
<a name="L3853"></a><tt class="py-lineno">3853</tt>  <tt class="py-line">        <tt class="py-name">a</tt><tt class="py-op">,</tt> <tt class="py-name">b</tt> <tt class="py-op">=</tt> <tt class="py-name">b</tt><tt class="py-op">,</tt> <tt class="py-name">a</tt><tt class="py-op">+</tt><tt class="py-name">b</tt> </tt>
</div><a name="fib2"></a><div id="fib2-def"><a name="L3854"></a><tt class="py-lineno">3854</tt> <a class="py-toggle" href="#" id="fib2-toggle" onclick="return toggle('fib2');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#fib2">fib2</a><tt class="py-op">(</tt><tt class="py-param">n</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="fib2-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="fib2-expanded"><a name="L3855"></a><tt class="py-lineno">3855</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3856"></a><tt class="py-lineno">3856</tt>  <tt class="py-line"><tt class="py-docstring">    direct calc (non-recursive) return n_th Fibonacci number (as float!)</tt> </tt>
<a name="L3857"></a><tt class="py-lineno">3857</tt>  <tt class="py-line"><tt class="py-docstring">    n=0 --&gt; 0</tt> </tt>
<a name="L3858"></a><tt class="py-lineno">3858</tt>  <tt class="py-line"><tt class="py-docstring">    n=1 --&gt; 1</tt> </tt>
<a name="L3859"></a><tt class="py-lineno">3859</tt>  <tt class="py-line"><tt class="py-docstring">    n=2 --&gt; 1</tt> </tt>
<a name="L3860"></a><tt class="py-lineno">3860</tt>  <tt class="py-line"><tt class="py-docstring">    ...</tt> </tt>
<a name="L3861"></a><tt class="py-lineno">3861</tt>  <tt class="py-line"><tt class="py-docstring">    n should be &lt;= 604 ;-( (as float)</tt> </tt>
<a name="L3862"></a><tt class="py-lineno">3862</tt>  <tt class="py-line"><tt class="py-docstring">    n should be &lt;= 46  ;-( (if you want to convert to int)</tt> </tt>
<a name="L3863"></a><tt class="py-lineno">3863</tt>  <tt class="py-line"><tt class="py-docstring">    #http://en.wikipedia.org/wiki/Fibonacci_sequence</tt> </tt>
<a name="L3864"></a><tt class="py-lineno">3864</tt>  <tt class="py-line"><tt class="py-docstring">    #</tt> </tt>
<a name="L3865"></a><tt class="py-lineno">3865</tt>  <tt class="py-line"><tt class="py-docstring">    http://www.research.att.com/cgi-bin/access.cgi/as/njas/sequences/eisA.cgi?Anum=A000045</tt> </tt>
<a name="L3866"></a><tt class="py-lineno">3866</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3867"></a><tt class="py-lineno">3867</tt>  <tt class="py-line">     </tt>
<a name="L3868"></a><tt class="py-lineno">3868</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">+</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1172" class="py-name"><a title="Priithon.mandel.sqrt
Priithon.plt.interface.sqrt
Priithon.plt.plot_objects.sqrt
Priithon.plt.plot_utility.sqrt
Priithon.plt.sqrt
Priithon.plt.wxplt.sqrt" class="py-name" href="#" onclick="return doclink('link-1172', 'sqrt', 'link-175');">sqrt</a></tt><tt class="py-op">(</tt><tt class="py-number">5</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">**</tt><tt class="py-name">n</tt><tt class="py-op">-</tt><tt class="py-op">(</tt><tt class="py-number">1</tt><tt class="py-op">-</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1173" class="py-name"><a title="Priithon.mandel.sqrt
Priithon.plt.interface.sqrt
Priithon.plt.plot_objects.sqrt
Priithon.plt.plot_utility.sqrt
Priithon.plt.sqrt
Priithon.plt.wxplt.sqrt" class="py-name" href="#" onclick="return doclink('link-1173', 'sqrt', 'link-175');">sqrt</a></tt><tt class="py-op">(</tt><tt class="py-number">5</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">**</tt><tt class="py-name">n</tt><tt class="py-op">)</tt><tt class="py-op">/</tt><tt class="py-op">(</tt><tt class="py-number">2</tt><tt class="py-op">**</tt><tt class="py-name">n</tt><tt class="py-op">*</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1174" class="py-name"><a title="Priithon.mandel.sqrt
Priithon.plt.interface.sqrt
Priithon.plt.plot_objects.sqrt
Priithon.plt.plot_utility.sqrt
Priithon.plt.sqrt
Priithon.plt.wxplt.sqrt" class="py-name" href="#" onclick="return doclink('link-1174', 'sqrt', 'link-175');">sqrt</a></tt><tt class="py-op">(</tt><tt class="py-number">5</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
</div><a name="L3869"></a><tt class="py-lineno">3869</tt>  <tt class="py-line"> </tt>
<a name="primes"></a><div id="primes-def"><a name="L3870"></a><tt class="py-lineno">3870</tt> <a class="py-toggle" href="#" id="primes-toggle" onclick="return toggle('primes');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#primes">primes</a><tt class="py-op">(</tt><tt class="py-param">max</tt><tt class="py-op">=</tt><tt class="py-number">100</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="primes-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="primes-expanded"><a name="L3871"></a><tt class="py-lineno">3871</tt>  <tt class="py-line">    <tt class="py-name">ps</tt><tt class="py-op">=</tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">]</tt> </tt>
<a name="L3872"></a><tt class="py-lineno">3872</tt>  <tt class="py-line">    <tt id="link-1175" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1175', 'i', 'link-65');">i</a></tt> <tt class="py-op">=</tt> <tt class="py-number">3</tt> </tt>
<a name="L3873"></a><tt class="py-lineno">3873</tt>  <tt class="py-line">    <tt class="py-keyword">yield</tt> <tt class="py-number">2</tt> </tt>
<a name="L3874"></a><tt class="py-lineno">3874</tt>  <tt class="py-line">    <tt class="py-keyword">while</tt> <tt id="link-1176" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1176', 'i', 'link-65');">i</a></tt><tt class="py-op">&lt;=</tt><tt id="link-1177" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-1177', 'max', 'link-172');">max</a></tt><tt class="py-op">:</tt> </tt>
<a name="L3875"></a><tt class="py-lineno">3875</tt>  <tt class="py-line">        <tt class="py-name">isPrime</tt> <tt class="py-op">=</tt> <tt class="py-number">1</tt> </tt>
<a name="L3876"></a><tt class="py-lineno">3876</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">p</tt> <tt class="py-keyword">in</tt> <tt class="py-name">ps</tt><tt class="py-op">:</tt> </tt>
<a name="L3877"></a><tt class="py-lineno">3877</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt id="link-1178" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1178', 'i', 'link-65');">i</a></tt> <tt class="py-op">%</tt> <tt class="py-name">p</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L3878"></a><tt class="py-lineno">3878</tt>  <tt class="py-line">                <tt class="py-name">isPrime</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L3879"></a><tt class="py-lineno">3879</tt>  <tt class="py-line">                <tt class="py-keyword">break</tt> </tt>
<a name="L3880"></a><tt class="py-lineno">3880</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">isPrime</tt><tt class="py-op">:</tt> </tt>
<a name="L3881"></a><tt class="py-lineno">3881</tt>  <tt class="py-line">            <tt class="py-name">ps</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt id="link-1179" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1179', 'i', 'link-65');">i</a></tt><tt class="py-op">)</tt> </tt>
<a name="L3882"></a><tt class="py-lineno">3882</tt>  <tt class="py-line">            <tt class="py-keyword">yield</tt> <tt id="link-1180" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1180', 'i', 'link-65');">i</a></tt> </tt>
<a name="L3883"></a><tt class="py-lineno">3883</tt>  <tt class="py-line">        <tt id="link-1181" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1181', 'i', 'link-65');">i</a></tt><tt class="py-op">+=</tt><tt class="py-number">1</tt> </tt>
</div><a name="L3884"></a><tt class="py-lineno">3884</tt>  <tt class="py-line"> </tt>
<a name="primeFactors"></a><div id="primeFactors-def"><a name="L3885"></a><tt class="py-lineno">3885</tt> <a class="py-toggle" href="#" id="primeFactors-toggle" onclick="return toggle('primeFactors');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#primeFactors">primeFactors</a><tt class="py-op">(</tt><tt class="py-param">a</tt><tt class="py-op">,</tt> <tt class="py-param">max</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">,</tt> <tt class="py-param">includeRemainder</tt><tt class="py-op">=</tt><tt id="link-1182" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1182', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="primeFactors-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="primeFactors-expanded"><a name="L3886"></a><tt class="py-lineno">3886</tt>  <tt class="py-line">    <tt class="py-docstring">"""return list of a's prime factors</tt> </tt>
<a name="L3887"></a><tt class="py-lineno">3887</tt>  <tt class="py-line"><tt class="py-docstring">    if max is not None:</tt> </tt>
<a name="L3888"></a><tt class="py-lineno">3888</tt>  <tt class="py-line"><tt class="py-docstring">       largest prime in list will be max</tt> </tt>
<a name="L3889"></a><tt class="py-lineno">3889</tt>  <tt class="py-line"><tt class="py-docstring">        (as often as it would be in the complete list)</tt> </tt>
<a name="L3890"></a><tt class="py-lineno">3890</tt>  <tt class="py-line"><tt class="py-docstring">       in this case: if includeRemainder is True:</tt> </tt>
<a name="L3891"></a><tt class="py-lineno">3891</tt>  <tt class="py-line"><tt class="py-docstring">                     append remainder so that N.product(&lt;list&gt;) == a</tt> </tt>
<a name="L3892"></a><tt class="py-lineno">3892</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3893"></a><tt class="py-lineno">3893</tt>  <tt class="py-line">    <tt class="py-name">f</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L3894"></a><tt class="py-lineno">3894</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">p</tt> <tt class="py-keyword">in</tt> <tt id="link-1183" class="py-name" targets="Function Priithon.useful.primes()=Priithon.useful-module.html#primes"><a title="Priithon.useful.primes" class="py-name" href="#" onclick="return doclink('link-1183', 'primes', 'link-1183');">primes</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3895"></a><tt class="py-lineno">3895</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-1184" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-1184', 'max', 'link-172');">max</a></tt> <tt class="py-keyword">is</tt> <tt class="py-keyword">not</tt> <tt class="py-name">None</tt> <tt class="py-keyword">and</tt> <tt class="py-name">p</tt><tt class="py-op">&gt;</tt><tt id="link-1185" class="py-name"><a title="Priithon.useful.max" class="py-name" href="#" onclick="return doclink('link-1185', 'max', 'link-172');">max</a></tt><tt class="py-op">:</tt> </tt>
<a name="L3896"></a><tt class="py-lineno">3896</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">includeRemainder</tt> <tt class="py-keyword">and</tt> <tt class="py-name">a</tt><tt class="py-op">&gt;</tt><tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L3897"></a><tt class="py-lineno">3897</tt>  <tt class="py-line">                <tt class="py-name">f</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">a</tt><tt class="py-op">)</tt> </tt>
<a name="L3898"></a><tt class="py-lineno">3898</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-name">f</tt> </tt>
<a name="L3899"></a><tt class="py-lineno">3899</tt>  <tt class="py-line">        <tt class="py-keyword">while</tt> <tt class="py-name">a</tt><tt class="py-op">%</tt><tt class="py-name">p</tt><tt class="py-op">==</tt><tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L3900"></a><tt class="py-lineno">3900</tt>  <tt class="py-line">            <tt class="py-name">f</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">p</tt><tt class="py-op">)</tt> </tt>
<a name="L3901"></a><tt class="py-lineno">3901</tt>  <tt class="py-line">            <tt class="py-name">a</tt><tt class="py-op">/=</tt><tt class="py-name">p</tt> </tt>
<a name="L3902"></a><tt class="py-lineno">3902</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">a</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L3903"></a><tt class="py-lineno">3903</tt>  <tt class="py-line">                <tt class="py-keyword">return</tt> <tt class="py-name">f</tt> </tt>
<a name="L3904"></a><tt class="py-lineno">3904</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">f</tt> </tt>
</div><a name="L3905"></a><tt class="py-lineno">3905</tt>  <tt class="py-line"> </tt>
<a name="factorial"></a><div id="factorial-def"><a name="L3906"></a><tt class="py-lineno">3906</tt> <a class="py-toggle" href="#" id="factorial-toggle" onclick="return toggle('factorial');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#factorial">factorial</a><tt class="py-op">(</tt><tt class="py-param">n</tt><tt class="py-op">,</tt> <tt class="py-param">_memo</tt><tt class="py-op">=</tt><tt class="py-op">{</tt><tt class="py-number">0</tt><tt class="py-op">:</tt><tt class="py-number">1</tt><tt class="py-op">,</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-number">1</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="factorial-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="factorial-expanded"><a name="L3907"></a><tt class="py-lineno">3907</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> <tt class="py-keyword">return</tt> <tt class="py-name">_memo</tt><tt class="py-op">[</tt><tt class="py-name">n</tt><tt class="py-op">]</tt> </tt>
<a name="L3908"></a><tt class="py-lineno">3908</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">KeyError</tt><tt class="py-op">:</tt> </tt>
<a name="L3909"></a><tt class="py-lineno">3909</tt>  <tt class="py-line">        <tt class="py-name">result</tt> <tt class="py-op">=</tt> <tt class="py-name">_memo</tt><tt class="py-op">[</tt><tt class="py-name">n</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">n</tt> <tt class="py-op">*</tt> <tt id="link-1186" class="py-name" targets="Function Priithon.useful.factorial()=Priithon.useful-module.html#factorial"><a title="Priithon.useful.factorial" class="py-name" href="#" onclick="return doclink('link-1186', 'factorial', 'link-1186');">factorial</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L3910"></a><tt class="py-lineno">3910</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">result</tt> </tt>
</div><a name="L3911"></a><tt class="py-lineno">3911</tt>  <tt class="py-line"><tt class="py-name">fac</tt> <tt class="py-op">=</tt> <tt id="link-1187" class="py-name"><a title="Priithon.useful.factorial" class="py-name" href="#" onclick="return doclink('link-1187', 'factorial', 'link-1186');">factorial</a></tt> </tt>
<a name="L3912"></a><tt class="py-lineno">3912</tt>  <tt class="py-line"> </tt>
<a name="gamma"></a><div id="gamma-def"><a name="L3913"></a><tt class="py-lineno">3913</tt> <a class="py-toggle" href="#" id="gamma-toggle" onclick="return toggle('gamma');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#gamma">gamma</a><tt class="py-op">(</tt><tt class="py-param">x</tt><tt class="py-op">,</tt> <tt class="py-param">_memo</tt><tt class="py-op">=</tt><tt class="py-op">{</tt><tt class="py-number">.5</tt><tt class="py-op">:</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1188" class="py-name"><a title="Priithon.mandel.pi
Priithon.plt.interface.pi
Priithon.plt.pi
Priithon.plt.plot_objects.pi
Priithon.plt.plot_utility.pi
Priithon.plt.wxplt.pi" class="py-name" href="#" onclick="return doclink('link-1188', 'pi', 'link-230');">pi</a></tt><tt class="py-op">**</tt><tt class="py-number">.5</tt><tt class="py-op">,</tt>  <tt class="py-number">1.</tt><tt class="py-op">:</tt><tt class="py-number">1.</tt><tt class="py-op">}</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="gamma-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="gamma-expanded"><a name="L3914"></a><tt class="py-lineno">3914</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3915"></a><tt class="py-lineno">3915</tt>  <tt class="py-line"><tt class="py-docstring">    return gamma function</tt> </tt>
<a name="L3916"></a><tt class="py-lineno">3916</tt>  <tt class="py-line"><tt class="py-docstring">    defined for integer and half-integer values</tt> </tt>
<a name="L3917"></a><tt class="py-lineno">3917</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3918"></a><tt class="py-lineno">3918</tt>  <tt class="py-line"><tt class="py-docstring">    you can use scipy.special.gamma() for the general case</tt> </tt>
<a name="L3919"></a><tt class="py-lineno">3919</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3920"></a><tt class="py-lineno">3920</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> <tt class="py-keyword">return</tt> <tt class="py-name">_memo</tt><tt class="py-op">[</tt><tt id="link-1189" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1189', 'x', 'link-481');">x</a></tt><tt class="py-op">]</tt> </tt>
<a name="L3921"></a><tt class="py-lineno">3921</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">KeyError</tt><tt class="py-op">:</tt> </tt>
<a name="L3922"></a><tt class="py-lineno">3922</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-1190" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1190', 'x', 'link-481');">x</a></tt><tt class="py-op">&gt;</tt><tt class="py-number">0</tt> <tt class="py-keyword">and</tt> <tt class="py-op">(</tt><tt id="link-1191" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1191', 'x', 'link-481');">x</a></tt> <tt class="py-op">==</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt id="link-1192" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1192', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt> <tt class="py-keyword">or</tt> <tt class="py-number">2.</tt><tt class="py-op">*</tt><tt id="link-1193" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1193', 'x', 'link-481');">x</a></tt> <tt class="py-op">%</tt> <tt class="py-number">2</tt> <tt class="py-op">==</tt> <tt class="py-number">1.</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3923"></a><tt class="py-lineno">3923</tt>  <tt class="py-line">            <tt class="py-name">xx</tt><tt class="py-op">=</tt><tt id="link-1194" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1194', 'x', 'link-481');">x</a></tt><tt class="py-op">-</tt><tt class="py-number">1</tt> </tt>
<a name="L3924"></a><tt class="py-lineno">3924</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt class="py-op">(</tt><tt class="py-name">xx</tt><tt class="py-op">)</tt><tt class="py-op">*</tt><tt id="link-1195" class="py-name" targets="Function Priithon.useful.gamma()=Priithon.useful-module.html#gamma"><a title="Priithon.useful.gamma" class="py-name" href="#" onclick="return doclink('link-1195', 'gamma', 'link-1195');">gamma</a></tt><tt class="py-op">(</tt><tt class="py-name">xx</tt><tt class="py-op">)</tt> </tt>
<a name="L3925"></a><tt class="py-lineno">3925</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3926"></a><tt class="py-lineno">3926</tt>  <tt class="py-line">            <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"we have gamma(x) only defined for x =.5, 1, 1.5,..."</tt> </tt>
</div><a name="L3927"></a><tt class="py-lineno">3927</tt>  <tt class="py-line">     </tt>
<a name="iterIndices"></a><div id="iterIndices-def"><a name="L3928"></a><tt class="py-lineno">3928</tt> <a class="py-toggle" href="#" id="iterIndices-toggle" onclick="return toggle('iterIndices');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#iterIndices">iterIndices</a><tt class="py-op">(</tt><tt class="py-param">shape</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="iterIndices-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="iterIndices-expanded"><a name="L3929"></a><tt class="py-lineno">3929</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">type</tt><tt class="py-op">(</tt><tt id="link-1196" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1196', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-name">int</tt><tt class="py-op">:</tt> </tt>
<a name="L3930"></a><tt class="py-lineno">3930</tt>  <tt class="py-line">        <tt id="link-1197" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1197', 'shape', 'link-58');">shape</a></tt> <tt class="py-op">=</tt> <tt class="py-op">(</tt><tt id="link-1198" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1198', 'shape', 'link-58');">shape</a></tt><tt class="py-op">,</tt><tt class="py-op">)</tt>     </tt>
<a name="L3931"></a><tt class="py-lineno">3931</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt id="link-1199" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1199', 'shape', 'link-58');">shape</a></tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L3932"></a><tt class="py-lineno">3932</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt id="link-1200" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1200', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-1201" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1201', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt id="link-1202" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1202', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3933"></a><tt class="py-lineno">3933</tt>  <tt class="py-line">            <tt class="py-keyword">yield</tt> <tt class="py-op">(</tt><tt id="link-1203" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1203', 'i', 'link-65');">i</a></tt><tt class="py-op">,</tt><tt class="py-op">)</tt> </tt>
<a name="L3934"></a><tt class="py-lineno">3934</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3935"></a><tt class="py-lineno">3935</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt id="link-1204" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1204', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt id="link-1205" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1205', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt id="link-1206" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1206', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3936"></a><tt class="py-lineno">3936</tt>  <tt class="py-line">            <tt class="py-keyword">for</tt> <tt class="py-name">ii</tt> <tt class="py-keyword">in</tt> <tt id="link-1207" class="py-name" targets="Function Priithon.useful.iterIndices()=Priithon.useful-module.html#iterIndices"><a title="Priithon.useful.iterIndices" class="py-name" href="#" onclick="return doclink('link-1207', 'iterIndices', 'link-1207');">iterIndices</a></tt><tt class="py-op">(</tt><tt id="link-1208" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.shape" class="py-name" href="#" onclick="return doclink('link-1208', 'shape', 'link-58');">shape</a></tt><tt class="py-op">[</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">]</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3937"></a><tt class="py-lineno">3937</tt>  <tt class="py-line">                <tt class="py-keyword">yield</tt> <tt class="py-op">(</tt><tt id="link-1209" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1209', 'i', 'link-65');">i</a></tt><tt class="py-op">,</tt><tt class="py-op">)</tt> <tt class="py-op">+</tt> <tt class="py-name">ii</tt> </tt>
</div><a name="iterPermutations"></a><div id="iterPermutations-def"><a name="L3938"></a><tt class="py-lineno">3938</tt> <a class="py-toggle" href="#" id="iterPermutations-toggle" onclick="return toggle('iterPermutations');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#iterPermutations">iterPermutations</a><tt class="py-op">(</tt><tt class="py-param">iterable</tt><tt class="py-op">,</tt> <tt class="py-param">r</tt><tt class="py-op">=</tt><tt class="py-name">None</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="iterPermutations-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="iterPermutations-expanded"><a name="L3939"></a><tt class="py-lineno">3939</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3940"></a><tt class="py-lineno">3940</tt>  <tt class="py-line"><tt class="py-docstring">    # permutations('ABCD', 2) --&gt; AB AC AD BA BC BD CA CB CD DA DB DC</tt> </tt>
<a name="L3941"></a><tt class="py-lineno">3941</tt>  <tt class="py-line"><tt class="py-docstring">    # permutations(range(3)) --&gt; 012 021 102 120 201 210</tt> </tt>
<a name="L3942"></a><tt class="py-lineno">3942</tt>  <tt class="py-line"><tt class="py-docstring">    in Python 2.6 this is itertools.permutations</tt> </tt>
<a name="L3943"></a><tt class="py-lineno">3943</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3944"></a><tt class="py-lineno">3944</tt>  <tt class="py-line">    <tt class="py-name">pool</tt> <tt class="py-op">=</tt> <tt class="py-name">tuple</tt><tt class="py-op">(</tt><tt class="py-name">iterable</tt><tt class="py-op">)</tt> </tt>
<a name="L3945"></a><tt class="py-lineno">3945</tt>  <tt class="py-line">    <tt class="py-name">n</tt> <tt class="py-op">=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">pool</tt><tt class="py-op">)</tt> </tt>
<a name="L3946"></a><tt class="py-lineno">3946</tt>  <tt class="py-line">    <tt class="py-name">r</tt> <tt class="py-op">=</tt> <tt class="py-name">n</tt> <tt class="py-keyword">if</tt> <tt class="py-name">r</tt> <tt class="py-keyword">is</tt> <tt class="py-name">None</tt> <tt class="py-keyword">else</tt> <tt class="py-name">r</tt> </tt>
<a name="L3947"></a><tt class="py-lineno">3947</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">r</tt> <tt class="py-op">&gt;</tt> <tt class="py-name">n</tt><tt class="py-op">:</tt> </tt>
<a name="L3948"></a><tt class="py-lineno">3948</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> </tt>
<a name="L3949"></a><tt class="py-lineno">3949</tt>  <tt class="py-line">    <tt class="py-name">indices</tt> <tt class="py-op">=</tt> <tt id="link-1210" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1210', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">)</tt> </tt>
<a name="L3950"></a><tt class="py-lineno">3950</tt>  <tt class="py-line">    <tt class="py-name">cycles</tt> <tt class="py-op">=</tt> <tt id="link-1211" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1211', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">n</tt><tt class="py-op">,</tt> <tt class="py-name">n</tt><tt class="py-op">-</tt><tt class="py-name">r</tt><tt class="py-op">,</tt> <tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L3951"></a><tt class="py-lineno">3951</tt>  <tt class="py-line">    <tt class="py-keyword">yield</tt> <tt class="py-name">tuple</tt><tt class="py-op">(</tt><tt class="py-name">pool</tt><tt class="py-op">[</tt><tt id="link-1212" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1212', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-keyword">for</tt> <tt id="link-1213" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1213', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">indices</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-name">r</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L3952"></a><tt class="py-lineno">3952</tt>  <tt class="py-line">    <tt class="py-keyword">while</tt> <tt class="py-name">n</tt><tt class="py-op">:</tt> </tt>
<a name="L3953"></a><tt class="py-lineno">3953</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt id="link-1214" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1214', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">reversed</tt><tt class="py-op">(</tt><tt id="link-1215" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1215', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-name">r</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L3954"></a><tt class="py-lineno">3954</tt>  <tt class="py-line">            <tt class="py-name">cycles</tt><tt class="py-op">[</tt><tt id="link-1216" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1216', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">-=</tt> <tt class="py-number">1</tt> </tt>
<a name="L3955"></a><tt class="py-lineno">3955</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">cycles</tt><tt class="py-op">[</tt><tt id="link-1217" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1217', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L3956"></a><tt class="py-lineno">3956</tt>  <tt class="py-line">                <tt class="py-name">indices</tt><tt class="py-op">[</tt><tt id="link-1218" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1218', 'i', 'link-65');">i</a></tt><tt class="py-op">:</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">indices</tt><tt class="py-op">[</tt><tt id="link-1219" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1219', 'i', 'link-65');">i</a></tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> <tt class="py-op">+</tt> <tt class="py-name">indices</tt><tt class="py-op">[</tt><tt id="link-1220" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1220', 'i', 'link-65');">i</a></tt><tt class="py-op">:</tt><tt id="link-1221" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1221', 'i', 'link-65');">i</a></tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
<a name="L3957"></a><tt class="py-lineno">3957</tt>  <tt class="py-line">                <tt class="py-name">cycles</tt><tt class="py-op">[</tt><tt id="link-1222" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1222', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">n</tt> <tt class="py-op">-</tt> <tt id="link-1223" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1223', 'i', 'link-65');">i</a></tt> </tt>
<a name="L3958"></a><tt class="py-lineno">3958</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3959"></a><tt class="py-lineno">3959</tt>  <tt class="py-line">                <tt class="py-name">j</tt> <tt class="py-op">=</tt> <tt class="py-name">cycles</tt><tt class="py-op">[</tt><tt id="link-1224" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1224', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> </tt>
<a name="L3960"></a><tt class="py-lineno">3960</tt>  <tt class="py-line">                <tt class="py-name">indices</tt><tt class="py-op">[</tt><tt id="link-1225" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1225', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">indices</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-name">j</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">indices</tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-name">j</tt><tt class="py-op">]</tt><tt class="py-op">,</tt> <tt class="py-name">indices</tt><tt class="py-op">[</tt><tt id="link-1226" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1226', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> </tt>
<a name="L3961"></a><tt class="py-lineno">3961</tt>  <tt class="py-line">                <tt class="py-keyword">yield</tt> <tt class="py-name">tuple</tt><tt class="py-op">(</tt><tt class="py-name">pool</tt><tt class="py-op">[</tt><tt id="link-1227" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1227', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-keyword">for</tt> <tt id="link-1228" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1228', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">indices</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-name">r</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L3962"></a><tt class="py-lineno">3962</tt>  <tt class="py-line">                <tt class="py-keyword">break</tt> </tt>
<a name="L3963"></a><tt class="py-lineno">3963</tt>  <tt class="py-line">        <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L3964"></a><tt class="py-lineno">3964</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> </tt>
</div><a name="iterProduct"></a><div id="iterProduct-def"><a name="L3965"></a><tt class="py-lineno">3965</tt> <a class="py-toggle" href="#" id="iterProduct-toggle" onclick="return toggle('iterProduct');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#iterProduct">iterProduct</a><tt class="py-op">(</tt><tt class="py-op">*</tt><tt class="py-param">args</tt><tt class="py-op">,</tt> <tt class="py-op">**</tt><tt class="py-param">kwds</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="iterProduct-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="iterProduct-expanded"><a name="L3966"></a><tt class="py-lineno">3966</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L3967"></a><tt class="py-lineno">3967</tt>  <tt class="py-line"><tt class="py-docstring">    iterProduct(*iterables[, repeat])  ## note: keyword-only argument !</tt> </tt>
<a name="L3968"></a><tt class="py-lineno">3968</tt>  <tt class="py-line"><tt class="py-docstring">    # product('ABCD', 'xy') --&gt; Ax Ay Bx By Cx Cy Dx Dy</tt> </tt>
<a name="L3969"></a><tt class="py-lineno">3969</tt>  <tt class="py-line"><tt class="py-docstring">    # product(range(2), repeat=3) --&gt; 000 001 010 011 100 101 110 111</tt> </tt>
<a name="L3970"></a><tt class="py-lineno">3970</tt>  <tt class="py-line"><tt class="py-docstring">    in Python 2.6 this is itertools.product</tt> </tt>
<a name="L3971"></a><tt class="py-lineno">3971</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L3972"></a><tt class="py-lineno">3972</tt>  <tt class="py-line">    <tt class="py-name">pools</tt> <tt class="py-op">=</tt> <tt class="py-name">map</tt><tt class="py-op">(</tt><tt class="py-name">tuple</tt><tt class="py-op">,</tt> <tt class="py-name">args</tt><tt class="py-op">)</tt> <tt class="py-op">*</tt> <tt class="py-name">kwds</tt><tt class="py-op">.</tt><tt class="py-name">get</tt><tt class="py-op">(</tt><tt class="py-string">'repeat'</tt><tt class="py-op">,</tt> <tt class="py-number">1</tt><tt class="py-op">)</tt> </tt>
<a name="L3973"></a><tt class="py-lineno">3973</tt>  <tt class="py-line">    <tt class="py-name">result</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">[</tt><tt class="py-op">]</tt><tt class="py-op">]</tt> </tt>
<a name="L3974"></a><tt class="py-lineno">3974</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">pool</tt> <tt class="py-keyword">in</tt> <tt class="py-name">pools</tt><tt class="py-op">:</tt> </tt>
<a name="L3975"></a><tt class="py-lineno">3975</tt>  <tt class="py-line">        <tt class="py-name">result</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt id="link-1229" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1229', 'x', 'link-481');">x</a></tt><tt class="py-op">+</tt><tt class="py-op">[</tt><tt class="py-name">y</tt><tt class="py-op">]</tt> <tt class="py-keyword">for</tt> <tt id="link-1230" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1230', 'x', 'link-481');">x</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">result</tt> <tt class="py-keyword">for</tt> <tt class="py-name">y</tt> <tt class="py-keyword">in</tt> <tt class="py-name">pool</tt><tt class="py-op">]</tt> </tt>
<a name="L3976"></a><tt class="py-lineno">3976</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">prod</tt> <tt class="py-keyword">in</tt> <tt class="py-name">result</tt><tt class="py-op">:</tt> </tt>
<a name="L3977"></a><tt class="py-lineno">3977</tt>  <tt class="py-line">        <tt class="py-keyword">yield</tt> <tt class="py-name">tuple</tt><tt class="py-op">(</tt><tt class="py-name">prod</tt><tt class="py-op">)</tt> </tt>
</div><a name="L3978"></a><tt class="py-lineno">3978</tt>  <tt class="py-line"> </tt>
<a name="L3979"></a><tt class="py-lineno">3979</tt>  <tt class="py-line"> </tt>
<a name="L3980"></a><tt class="py-lineno">3980</tt>  <tt class="py-line"> </tt>
<a name="smooth1d"></a><div id="smooth1d-def"><a name="L3981"></a><tt class="py-lineno">3981</tt> <a class="py-toggle" href="#" id="smooth1d-toggle" onclick="return toggle('smooth1d');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#smooth1d">smooth1d</a><tt class="py-op">(</tt><tt class="py-param">x</tt><tt class="py-op">,</tt><tt class="py-param">window_len</tt><tt class="py-op">=</tt><tt class="py-number">10</tt><tt class="py-op">,</tt><tt class="py-param">window</tt><tt class="py-op">=</tt><tt class="py-string">'hanning'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="smooth1d-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="smooth1d-expanded"><a name="L3982"></a><tt class="py-lineno">3982</tt>  <tt class="py-line">    <tt class="py-docstring">"""smooth the data using a window with requested size.</tt> </tt>
<a name="L3983"></a><tt class="py-lineno">3983</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L3984"></a><tt class="py-lineno">3984</tt>  <tt class="py-line"><tt class="py-docstring">    This method is based on the convolution of a scaled window with the signal.</tt> </tt>
<a name="L3985"></a><tt class="py-lineno">3985</tt>  <tt class="py-line"><tt class="py-docstring">    The signal is prepared by introducing reflected copies of the signal </tt> </tt>
<a name="L3986"></a><tt class="py-lineno">3986</tt>  <tt class="py-line"><tt class="py-docstring">    (with the window size) in both ends so that transient parts are minimized</tt> </tt>
<a name="L3987"></a><tt class="py-lineno">3987</tt>  <tt class="py-line"><tt class="py-docstring">    in the begining and end part of the output signal.</tt> </tt>
<a name="L3988"></a><tt class="py-lineno">3988</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L3989"></a><tt class="py-lineno">3989</tt>  <tt class="py-line"><tt class="py-docstring">    input:</tt> </tt>
<a name="L3990"></a><tt class="py-lineno">3990</tt>  <tt class="py-line"><tt class="py-docstring">        x: the input signal </tt> </tt>
<a name="L3991"></a><tt class="py-lineno">3991</tt>  <tt class="py-line"><tt class="py-docstring">        window_len: the dimension of the smoothing window</tt> </tt>
<a name="L3992"></a><tt class="py-lineno">3992</tt>  <tt class="py-line"><tt class="py-docstring">        window: the type of window from 'flat', 'hanning', 'hamming', 'bartlett', 'blackman'</tt> </tt>
<a name="L3993"></a><tt class="py-lineno">3993</tt>  <tt class="py-line"><tt class="py-docstring">            flat window will produce a moving average smoothing.</tt> </tt>
<a name="L3994"></a><tt class="py-lineno">3994</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L3995"></a><tt class="py-lineno">3995</tt>  <tt class="py-line"><tt class="py-docstring">    output:</tt> </tt>
<a name="L3996"></a><tt class="py-lineno">3996</tt>  <tt class="py-line"><tt class="py-docstring">        the smoothed signal</tt> </tt>
<a name="L3997"></a><tt class="py-lineno">3997</tt>  <tt class="py-line"><tt class="py-docstring">        </tt> </tt>
<a name="L3998"></a><tt class="py-lineno">3998</tt>  <tt class="py-line"><tt class="py-docstring">    (ref.: copy paste from http://www.scipy.org/Cookbook/SignalSmooth)</tt> </tt>
<a name="L3999"></a><tt class="py-lineno">3999</tt>  <tt class="py-line"><tt class="py-docstring">    example:</tt> </tt>
<a name="L4000"></a><tt class="py-lineno">4000</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4001"></a><tt class="py-lineno">4001</tt>  <tt class="py-line"><tt class="py-docstring">    t=linspace(-2,2,0.1)</tt> </tt>
<a name="L4002"></a><tt class="py-lineno">4002</tt>  <tt class="py-line"><tt class="py-docstring">    x=sin(t)+randn(len(t))*0.1</tt> </tt>
<a name="L4003"></a><tt class="py-lineno">4003</tt>  <tt class="py-line"><tt class="py-docstring">    y=smooth(x)</tt> </tt>
<a name="L4004"></a><tt class="py-lineno">4004</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L4005"></a><tt class="py-lineno">4005</tt>  <tt class="py-line"><tt class="py-docstring">    see also: </tt> </tt>
<a name="L4006"></a><tt class="py-lineno">4006</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L4007"></a><tt class="py-lineno">4007</tt>  <tt class="py-line"><tt class="py-docstring">    numpy.hanning, numpy.hamming, numpy.bartlett, numpy.blackman, numpy.convolve</tt> </tt>
<a name="L4008"></a><tt class="py-lineno">4008</tt>  <tt class="py-line"><tt class="py-docstring">    scipy.signal.lfilter</tt> </tt>
<a name="L4009"></a><tt class="py-lineno">4009</tt>  <tt class="py-line"><tt class="py-docstring"> </tt> </tt>
<a name="L4010"></a><tt class="py-lineno">4010</tt>  <tt class="py-line"><tt class="py-docstring">    TODO: the window parameter could be the window itself if an array instead of a string   </tt> </tt>
<a name="L4011"></a><tt class="py-lineno">4011</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L4012"></a><tt class="py-lineno">4012</tt>  <tt class="py-line"> </tt>
<a name="L4013"></a><tt class="py-lineno">4013</tt>  <tt class="py-line">    <tt id="link-1231" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1231', 'x', 'link-481');">x</a></tt> <tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">asarray</tt><tt class="py-op">(</tt><tt id="link-1232" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1232', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt> </tt>
<a name="L4014"></a><tt class="py-lineno">4014</tt>  <tt class="py-line"> </tt>
<a name="L4015"></a><tt class="py-lineno">4015</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-1233" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1233', 'x', 'link-481');">x</a></tt><tt class="py-op">.</tt><tt id="link-1234" class="py-name"><a title="Priithon.mockNDarray.mockNDarray.ndim" class="py-name" href="#" onclick="return doclink('link-1234', 'ndim', 'link-532');">ndim</a></tt> <tt class="py-op">!=</tt> <tt class="py-number">1</tt><tt class="py-op">:</tt> </tt>
<a name="L4016"></a><tt class="py-lineno">4016</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"smooth only accepts 1 dimension arrays."</tt> </tt>
<a name="L4017"></a><tt class="py-lineno">4017</tt>  <tt class="py-line"> </tt>
<a name="L4018"></a><tt class="py-lineno">4018</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt id="link-1235" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1235', 'x', 'link-481');">x</a></tt><tt class="py-op">.</tt><tt id="link-1236" class="py-name"><a title="Priithon.plt.plot_objects.text_object.size
Priithon.plt.plot_utility.box_object.size
Priithon.viewerRubberbandMode.viewerRubberbandMode.size" class="py-name" href="#" onclick="return doclink('link-1236', 'size', 'link-107');">size</a></tt> <tt class="py-op">&lt;</tt> <tt class="py-name">window_len</tt><tt class="py-op">:</tt> </tt>
<a name="L4019"></a><tt class="py-lineno">4019</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"Input vector needs to be bigger than window size."</tt> </tt>
<a name="L4020"></a><tt class="py-lineno">4020</tt>  <tt class="py-line"> </tt>
<a name="L4021"></a><tt class="py-lineno">4021</tt>  <tt class="py-line"> </tt>
<a name="L4022"></a><tt class="py-lineno">4022</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">window_len</tt><tt class="py-op">&lt;</tt><tt class="py-number">3</tt><tt class="py-op">:</tt> </tt>
<a name="L4023"></a><tt class="py-lineno">4023</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt id="link-1237" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1237', 'x', 'link-481');">x</a></tt> </tt>
<a name="L4024"></a><tt class="py-lineno">4024</tt>  <tt class="py-line"> </tt>
<a name="L4025"></a><tt class="py-lineno">4025</tt>  <tt class="py-line"> </tt>
<a name="L4026"></a><tt class="py-lineno">4026</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt class="py-name">window</tt> <tt class="py-keyword">in</tt> <tt class="py-op">[</tt><tt class="py-string">'flat'</tt><tt class="py-op">,</tt> <tt class="py-string">'hanning'</tt><tt class="py-op">,</tt> <tt class="py-string">'hamming'</tt><tt class="py-op">,</tt> <tt class="py-string">'bartlett'</tt><tt class="py-op">,</tt> <tt class="py-string">'blackman'</tt><tt class="py-op">]</tt><tt class="py-op">:</tt> </tt>
<a name="L4027"></a><tt class="py-lineno">4027</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"Window is on of 'flat', 'hanning', 'hamming', 'bartlett', 'blackman'"</tt> </tt>
<a name="L4028"></a><tt class="py-lineno">4028</tt>  <tt class="py-line"> </tt>
<a name="L4029"></a><tt class="py-lineno">4029</tt>  <tt class="py-line"> </tt>
<a name="L4030"></a><tt class="py-lineno">4030</tt>  <tt class="py-line">    <tt class="py-name">s</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1238" class="py-name" targets="Variable Priithon.mandel.r_=Priithon.mandel-module.html#r_,Variable Priithon.plt.interface.r_=Priithon.plt.interface-module.html#r_,Variable Priithon.plt.plot_objects.r_=Priithon.plt.plot_objects-module.html#r_,Variable Priithon.plt.plot_utility.r_=Priithon.plt.plot_utility-module.html#r_,Variable Priithon.plt.r_=Priithon.plt-module.html#r_,Variable Priithon.plt.wxplt.r_=Priithon.plt.wxplt-module.html#r_"><a title="Priithon.mandel.r_
Priithon.plt.interface.r_
Priithon.plt.plot_objects.r_
Priithon.plt.plot_utility.r_
Priithon.plt.r_
Priithon.plt.wxplt.r_" class="py-name" href="#" onclick="return doclink('link-1238', 'r_', 'link-1238');">r_</a></tt><tt class="py-op">[</tt><tt class="py-number">2</tt><tt class="py-op">*</tt><tt id="link-1239" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1239', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt><tt class="py-op">-</tt><tt id="link-1240" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1240', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-name">window_len</tt><tt class="py-op">:</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">,</tt><tt id="link-1241" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1241', 'x', 'link-481');">x</a></tt><tt class="py-op">,</tt><tt class="py-number">2</tt><tt class="py-op">*</tt><tt id="link-1242" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1242', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">-</tt><tt id="link-1243" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1243', 'x', 'link-481');">x</a></tt><tt class="py-op">[</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-name">window_len</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">]</tt><tt class="py-op">]</tt> </tt>
<a name="L4031"></a><tt class="py-lineno">4031</tt>  <tt class="py-line">    <tt class="py-comment">#print(len(s))</tt> </tt>
<a name="L4032"></a><tt class="py-lineno">4032</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">if</tt> <tt class="py-name">window</tt> <tt class="py-op">==</tt> <tt class="py-string">'flat'</tt><tt class="py-op">:</tt> <tt class="py-comment">#moving average</tt> </tt>
<a name="L4033"></a><tt class="py-lineno">4033</tt>  <tt class="py-line">        <tt class="py-name">w</tt><tt class="py-op">=</tt><tt class="py-name">ones</tt><tt class="py-op">(</tt><tt class="py-name">window_len</tt><tt class="py-op">,</tt><tt class="py-string">'d'</tt><tt class="py-op">)</tt> </tt>
<a name="L4034"></a><tt class="py-lineno">4034</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4035"></a><tt class="py-lineno">4035</tt>  <tt class="py-line">        <tt class="py-name">w</tt><tt class="py-op">=</tt><tt class="py-name">eval</tt><tt class="py-op">(</tt><tt class="py-string">'N.'</tt><tt class="py-op">+</tt><tt class="py-name">window</tt><tt class="py-op">+</tt><tt class="py-string">'(window_len)'</tt><tt class="py-op">)</tt> </tt>
<a name="L4036"></a><tt class="py-lineno">4036</tt>  <tt class="py-line"> </tt>
<a name="L4037"></a><tt class="py-lineno">4037</tt>  <tt class="py-line">    <tt class="py-name">y</tt><tt class="py-op">=</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1244" class="py-name" targets="Function Priithon.fftfuncs.convolve()=Priithon.fftfuncs-module.html#convolve"><a title="Priithon.fftfuncs.convolve" class="py-name" href="#" onclick="return doclink('link-1244', 'convolve', 'link-1244');">convolve</a></tt><tt class="py-op">(</tt><tt class="py-name">w</tt><tt class="py-op">/</tt><tt class="py-name">w</tt><tt class="py-op">.</tt><tt class="py-name">sum</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">,</tt><tt class="py-name">s</tt><tt class="py-op">,</tt><tt class="py-name">mode</tt><tt class="py-op">=</tt><tt class="py-string">'same'</tt><tt class="py-op">)</tt> </tt>
<a name="L4038"></a><tt class="py-lineno">4038</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">y</tt><tt class="py-op">[</tt><tt class="py-name">window_len</tt><tt class="py-op">-</tt><tt class="py-number">1</tt><tt class="py-op">:</tt><tt class="py-op">-</tt><tt class="py-name">window_len</tt><tt class="py-op">+</tt><tt class="py-number">1</tt><tt class="py-op">]</tt> </tt>
</div><a name="L4039"></a><tt class="py-lineno">4039</tt>  <tt class="py-line"> </tt>
<a name="L4040"></a><tt class="py-lineno">4040</tt>  <tt class="py-line"> </tt>
<a name="L4041"></a><tt class="py-lineno">4041</tt>  <tt class="py-line"> </tt>
<a name="unique"></a><div id="unique-def"><a name="L4042"></a><tt class="py-lineno">4042</tt> <a class="py-toggle" href="#" id="unique-toggle" onclick="return toggle('unique');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#unique">unique</a><tt class="py-op">(</tt><tt class="py-param">s</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="unique-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="unique-expanded"><a name="L4043"></a><tt class="py-lineno">4043</tt>  <tt class="py-line">    <tt class="py-docstring">"""Return a list of the elements in s, but without duplicates.</tt> </tt>
<a name="L4044"></a><tt class="py-lineno">4044</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4045"></a><tt class="py-lineno">4045</tt>  <tt class="py-line"><tt class="py-docstring">    For example, unique([1,2,3,1,2,3]) is some permutation of [1,2,3],</tt> </tt>
<a name="L4046"></a><tt class="py-lineno">4046</tt>  <tt class="py-line"><tt class="py-docstring">    unique("abcabc") some permutation of ["a", "b", "c"], and</tt> </tt>
<a name="L4047"></a><tt class="py-lineno">4047</tt>  <tt class="py-line"><tt class="py-docstring">    unique(([1, 2], [2, 3], [1, 2])) some permutation of</tt> </tt>
<a name="L4048"></a><tt class="py-lineno">4048</tt>  <tt class="py-line"><tt class="py-docstring">    [[2, 3], [1, 2]].</tt> </tt>
<a name="L4049"></a><tt class="py-lineno">4049</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4050"></a><tt class="py-lineno">4050</tt>  <tt class="py-line"><tt class="py-docstring">    For best speed, all sequence elements should be hashable.  Then</tt> </tt>
<a name="L4051"></a><tt class="py-lineno">4051</tt>  <tt class="py-line"><tt class="py-docstring">    unique() will usually work in linear time.</tt> </tt>
<a name="L4052"></a><tt class="py-lineno">4052</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4053"></a><tt class="py-lineno">4053</tt>  <tt class="py-line"><tt class="py-docstring">    If not possible, the sequence elements should enjoy a total</tt> </tt>
<a name="L4054"></a><tt class="py-lineno">4054</tt>  <tt class="py-line"><tt class="py-docstring">    ordering, and if list(s).sort() doesn't raise TypeError it's</tt> </tt>
<a name="L4055"></a><tt class="py-lineno">4055</tt>  <tt class="py-line"><tt class="py-docstring">    assumed that they do enjoy a total ordering.  Then unique() will</tt> </tt>
<a name="L4056"></a><tt class="py-lineno">4056</tt>  <tt class="py-line"><tt class="py-docstring">    usually work in O(N*log2(N)) time.</tt> </tt>
<a name="L4057"></a><tt class="py-lineno">4057</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4058"></a><tt class="py-lineno">4058</tt>  <tt class="py-line"><tt class="py-docstring">    If that's not possible either, the sequence elements must support</tt> </tt>
<a name="L4059"></a><tt class="py-lineno">4059</tt>  <tt class="py-line"><tt class="py-docstring">    equality-testing.  Then unique() will usually work in quadratic</tt> </tt>
<a name="L4060"></a><tt class="py-lineno">4060</tt>  <tt class="py-line"><tt class="py-docstring">    time.</tt> </tt>
<a name="L4061"></a><tt class="py-lineno">4061</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4062"></a><tt class="py-lineno">4062</tt>  <tt class="py-line"><tt class="py-docstring">    http://code.activestate.com/recipes/52560 by Tim Peters</tt> </tt>
<a name="L4063"></a><tt class="py-lineno">4063</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L4064"></a><tt class="py-lineno">4064</tt>  <tt class="py-line"> </tt>
<a name="L4065"></a><tt class="py-lineno">4065</tt>  <tt class="py-line">    <tt class="py-name">n</tt> <tt class="py-op">=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">)</tt> </tt>
<a name="L4066"></a><tt class="py-lineno">4066</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">n</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L4067"></a><tt class="py-lineno">4067</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L4068"></a><tt class="py-lineno">4068</tt>  <tt class="py-line"> </tt>
<a name="L4069"></a><tt class="py-lineno">4069</tt>  <tt class="py-line">    <tt class="py-comment"># Try using a dict first, as that's the fastest and will usually</tt> </tt>
<a name="L4070"></a><tt class="py-lineno">4070</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># work.  If it doesn't work, it will usually fail quickly, so it</tt> </tt>
<a name="L4071"></a><tt class="py-lineno">4071</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># usually doesn't cost much to *try* it.  It requires that all the</tt> </tt>
<a name="L4072"></a><tt class="py-lineno">4072</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># sequence elements be hashable, and support equality comparison.</tt> </tt>
<a name="L4073"></a><tt class="py-lineno">4073</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">u</tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt> </tt>
<a name="L4074"></a><tt class="py-lineno">4074</tt>  <tt class="py-line">    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L4075"></a><tt class="py-lineno">4075</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt id="link-1245" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1245', 'x', 'link-481');">x</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">s</tt><tt class="py-op">:</tt> </tt>
<a name="L4076"></a><tt class="py-lineno">4076</tt>  <tt class="py-line">            <tt class="py-name">u</tt><tt class="py-op">[</tt><tt id="link-1246" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1246', 'x', 'link-481');">x</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-number">1</tt> </tt>
<a name="L4077"></a><tt class="py-lineno">4077</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">TypeError</tt><tt class="py-op">:</tt> </tt>
<a name="L4078"></a><tt class="py-lineno">4078</tt>  <tt class="py-line">        <tt class="py-keyword">del</tt> <tt class="py-name">u</tt>  <tt class="py-comment"># move on to the next method</tt> </tt>
<a name="L4079"></a><tt class="py-lineno">4079</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4080"></a><tt class="py-lineno">4080</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">u</tt><tt class="py-op">.</tt><tt id="link-1247" class="py-name"><a title="Priithon.plt.dumbdbm_patched._Database.keys" class="py-name" href="#" onclick="return doclink('link-1247', 'keys', 'link-116');">keys</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L4081"></a><tt class="py-lineno">4081</tt>  <tt class="py-line"> </tt>
<a name="L4082"></a><tt class="py-lineno">4082</tt>  <tt class="py-line">    <tt class="py-comment"># We can't hash all the elements.  Second fastest is to sort,</tt> </tt>
<a name="L4083"></a><tt class="py-lineno">4083</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># which brings the equal elements together; then duplicates are</tt> </tt>
<a name="L4084"></a><tt class="py-lineno">4084</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># easy to weed out in a single pass.</tt> </tt>
<a name="L4085"></a><tt class="py-lineno">4085</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># NOTE:  Python's list.sort() was designed to be efficient in the</tt> </tt>
<a name="L4086"></a><tt class="py-lineno">4086</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># presence of many duplicate elements.  This isn't true of all</tt> </tt>
<a name="L4087"></a><tt class="py-lineno">4087</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># sort functions in all languages or libraries, so this approach</tt> </tt>
<a name="L4088"></a><tt class="py-lineno">4088</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># is more effective in Python than it may be elsewhere.</tt> </tt>
<a name="L4089"></a><tt class="py-lineno">4089</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">try</tt><tt class="py-op">:</tt> </tt>
<a name="L4090"></a><tt class="py-lineno">4090</tt>  <tt class="py-line">        <tt class="py-name">t</tt> <tt class="py-op">=</tt> <tt class="py-name">list</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">)</tt> </tt>
<a name="L4091"></a><tt class="py-lineno">4091</tt>  <tt class="py-line">        <tt class="py-name">t</tt><tt class="py-op">.</tt><tt class="py-name">sort</tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L4092"></a><tt class="py-lineno">4092</tt>  <tt class="py-line">    <tt class="py-keyword">except</tt> <tt class="py-name">TypeError</tt><tt class="py-op">:</tt> </tt>
<a name="L4093"></a><tt class="py-lineno">4093</tt>  <tt class="py-line">        <tt class="py-keyword">del</tt> <tt class="py-name">t</tt>  <tt class="py-comment"># move on to the next method</tt> </tt>
<a name="L4094"></a><tt class="py-lineno">4094</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4095"></a><tt class="py-lineno">4095</tt>  <tt class="py-line">        <tt class="py-keyword">assert</tt> <tt class="py-name">n</tt> <tt class="py-op">&gt;</tt> <tt class="py-number">0</tt> </tt>
<a name="L4096"></a><tt class="py-lineno">4096</tt>  <tt class="py-line">        <tt class="py-name">last</tt> <tt class="py-op">=</tt> <tt class="py-name">t</tt><tt class="py-op">[</tt><tt class="py-number">0</tt><tt class="py-op">]</tt> </tt>
<a name="L4097"></a><tt class="py-lineno">4097</tt>  <tt class="py-line">        <tt class="py-name">lasti</tt> <tt class="py-op">=</tt> <tt id="link-1248" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1248', 'i', 'link-65');">i</a></tt> <tt class="py-op">=</tt> <tt class="py-number">1</tt> </tt>
<a name="L4098"></a><tt class="py-lineno">4098</tt>  <tt class="py-line">        <tt class="py-keyword">while</tt> <tt id="link-1249" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1249', 'i', 'link-65');">i</a></tt> <tt class="py-op">&lt;</tt> <tt class="py-name">n</tt><tt class="py-op">:</tt> </tt>
<a name="L4099"></a><tt class="py-lineno">4099</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">t</tt><tt class="py-op">[</tt><tt id="link-1250" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1250', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> <tt class="py-op">!=</tt> <tt class="py-name">last</tt><tt class="py-op">:</tt> </tt>
<a name="L4100"></a><tt class="py-lineno">4100</tt>  <tt class="py-line">                <tt class="py-name">t</tt><tt class="py-op">[</tt><tt class="py-name">lasti</tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-name">last</tt> <tt class="py-op">=</tt> <tt class="py-name">t</tt><tt class="py-op">[</tt><tt id="link-1251" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1251', 'i', 'link-65');">i</a></tt><tt class="py-op">]</tt> </tt>
<a name="L4101"></a><tt class="py-lineno">4101</tt>  <tt class="py-line">                <tt class="py-name">lasti</tt> <tt class="py-op">+=</tt> <tt class="py-number">1</tt> </tt>
<a name="L4102"></a><tt class="py-lineno">4102</tt>  <tt class="py-line">            <tt id="link-1252" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1252', 'i', 'link-65');">i</a></tt> <tt class="py-op">+=</tt> <tt class="py-number">1</tt> </tt>
<a name="L4103"></a><tt class="py-lineno">4103</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">t</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-name">lasti</tt><tt class="py-op">]</tt> </tt>
<a name="L4104"></a><tt class="py-lineno">4104</tt>  <tt class="py-line"> </tt>
<a name="L4105"></a><tt class="py-lineno">4105</tt>  <tt class="py-line">    <tt class="py-comment"># Brute force is all that's left.</tt> </tt>
<a name="L4106"></a><tt class="py-lineno">4106</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">u</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L4107"></a><tt class="py-lineno">4107</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-1253" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1253', 'x', 'link-481');">x</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">s</tt><tt class="py-op">:</tt> </tt>
<a name="L4108"></a><tt class="py-lineno">4108</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt id="link-1254" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1254', 'x', 'link-481');">x</a></tt> <tt class="py-keyword">not</tt> <tt class="py-keyword">in</tt> <tt class="py-name">u</tt><tt class="py-op">:</tt> </tt>
<a name="L4109"></a><tt class="py-lineno">4109</tt>  <tt class="py-line">            <tt class="py-name">u</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt id="link-1255" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1255', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt> </tt>
<a name="L4110"></a><tt class="py-lineno">4110</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">u</tt> </tt>
</div><a name="L4111"></a><tt class="py-lineno">4111</tt>  <tt class="py-line"> </tt>
<a name="L4112"></a><tt class="py-lineno">4112</tt>  <tt class="py-line"> </tt>
<a name="flatten"></a><div id="flatten-def"><a name="L4113"></a><tt class="py-lineno">4113</tt> <a class="py-toggle" href="#" id="flatten-toggle" onclick="return toggle('flatten');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#flatten">flatten</a><tt class="py-op">(</tt><tt class="py-param">x</tt><tt class="py-op">,</tt> <tt class="py-param">mode</tt><tt class="py-op">=</tt><tt class="py-string">"listsOnly"</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="flatten-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="flatten-expanded"><a name="L4114"></a><tt class="py-lineno">4114</tt>  <tt class="py-line">    <tt class="py-docstring">"""flatten(sequence) -&gt; list</tt> </tt>
<a name="L4115"></a><tt class="py-lineno">4115</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4116"></a><tt class="py-lineno">4116</tt>  <tt class="py-line"><tt class="py-docstring">    Returns a single, flat list which contains all elements retrieved</tt> </tt>
<a name="L4117"></a><tt class="py-lineno">4117</tt>  <tt class="py-line"><tt class="py-docstring">    from the sequence and all recursively contained sub-sequences</tt> </tt>
<a name="L4118"></a><tt class="py-lineno">4118</tt>  <tt class="py-line"><tt class="py-docstring">    (iterables).</tt> </tt>
<a name="L4119"></a><tt class="py-lineno">4119</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4120"></a><tt class="py-lineno">4120</tt>  <tt class="py-line"><tt class="py-docstring">    there are three different modes (semantic variations):</tt> </tt>
<a name="L4121"></a><tt class="py-lineno">4121</tt>  <tt class="py-line"><tt class="py-docstring">       "listsOnly": flatten lists only, leave sub-tuples and other sub-seqs in tact</tt> </tt>
<a name="L4122"></a><tt class="py-lineno">4122</tt>  <tt class="py-line"><tt class="py-docstring">       "tuplesAlso": flatten lists and tuples, leave other sub-seqs (like arrays) in tact</tt> </tt>
<a name="L4123"></a><tt class="py-lineno">4123</tt>  <tt class="py-line"><tt class="py-docstring">       "all": flatten all interables into one flat lists</tt> </tt>
<a name="L4124"></a><tt class="py-lineno">4124</tt>  <tt class="py-line"><tt class="py-docstring">    (only the first letters, "lis", "tup", "all" are significant !)</tt> </tt>
<a name="L4125"></a><tt class="py-lineno">4125</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4126"></a><tt class="py-lineno">4126</tt>  <tt class="py-line"><tt class="py-docstring">    Examples:</tt> </tt>
<a name="L4127"></a><tt class="py-lineno">4127</tt>  <tt class="py-line"><tt class="py-docstring">    &gt;&gt;&gt; [1, 2, [3,4], (5,6)]</tt> </tt>
<a name="L4128"></a><tt class="py-lineno">4128</tt>  <tt class="py-line"><tt class="py-docstring">    [1, 2, [3, 4], (5, 6)]</tt> </tt>
<a name="L4129"></a><tt class="py-lineno">4129</tt>  <tt class="py-line"><tt class="py-docstring">    &gt;&gt;&gt; U.flatten(_)</tt> </tt>
<a name="L4130"></a><tt class="py-lineno">4130</tt>  <tt class="py-line"><tt class="py-docstring">    [1, 2, 3, 4, (5, 6)]</tt> </tt>
<a name="L4131"></a><tt class="py-lineno">4131</tt>  <tt class="py-line"><tt class="py-docstring">    &gt;&gt;&gt; flatten([[[1,2,3], (42,None)], [4,5], [6], 7, U.arrI(8,9,10)], mode='all')</tt> </tt>
<a name="L4132"></a><tt class="py-lineno">4132</tt>  <tt class="py-line"><tt class="py-docstring">    [1, 2, 3, 42, None, 4, 5, 6, 7, 8, 9, 10]</tt> </tt>
<a name="L4133"></a><tt class="py-lineno">4133</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4134"></a><tt class="py-lineno">4134</tt>  <tt class="py-line"><tt class="py-docstring">    (inspired by http://kogs-www.informatik.uni-hamburg.de/~meine/python_tricks)</tt> </tt>
<a name="L4135"></a><tt class="py-lineno">4135</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L4136"></a><tt class="py-lineno">4136</tt>  <tt class="py-line"> </tt>
<a name="L4137"></a><tt class="py-lineno">4137</tt>  <tt class="py-line">    <tt class="py-name">result</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L4138"></a><tt class="py-lineno">4138</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">mode</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">3</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-string">"all"</tt><tt class="py-op">:</tt> </tt>
<a name="L4139"></a><tt class="py-lineno">4139</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">el</tt> <tt class="py-keyword">in</tt> <tt id="link-1256" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1256', 'x', 'link-481');">x</a></tt><tt class="py-op">:</tt> </tt>
<a name="L4140"></a><tt class="py-lineno">4140</tt>  <tt class="py-line">            <tt class="py-comment">#if isinstance(el, (list, tuple)):</tt> </tt>
<a name="L4141"></a><tt class="py-lineno">4141</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-keyword">if</tt> <tt class="py-name">hasattr</tt><tt class="py-op">(</tt><tt class="py-name">el</tt><tt class="py-op">,</tt> <tt class="py-string">"__iter__"</tt><tt class="py-op">)</tt> <tt class="py-keyword">and</tt> <tt class="py-keyword">not</tt> <tt class="py-name">isinstance</tt><tt class="py-op">(</tt><tt class="py-name">el</tt><tt class="py-op">,</tt> <tt class="py-name">basestring</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4142"></a><tt class="py-lineno">4142</tt>  <tt class="py-line">                <tt class="py-name">result</tt><tt class="py-op">.</tt><tt class="py-name">extend</tt><tt class="py-op">(</tt><tt id="link-1257" class="py-name" targets="Function Priithon.useful.flatten()=Priithon.useful-module.html#flatten"><a title="Priithon.useful.flatten" class="py-name" href="#" onclick="return doclink('link-1257', 'flatten', 'link-1257');">flatten</a></tt><tt class="py-op">(</tt><tt class="py-name">el</tt><tt class="py-op">,</tt> <tt class="py-name">mode</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L4143"></a><tt class="py-lineno">4143</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4144"></a><tt class="py-lineno">4144</tt>  <tt class="py-line">                <tt class="py-name">result</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">el</tt><tt class="py-op">)</tt> </tt>
<a name="L4145"></a><tt class="py-lineno">4145</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">mode</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">3</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-string">"tup"</tt><tt class="py-op">:</tt> </tt>
<a name="L4146"></a><tt class="py-lineno">4146</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">el</tt> <tt class="py-keyword">in</tt> <tt id="link-1258" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1258', 'x', 'link-481');">x</a></tt><tt class="py-op">:</tt> </tt>
<a name="L4147"></a><tt class="py-lineno">4147</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">isinstance</tt><tt class="py-op">(</tt><tt class="py-name">el</tt><tt class="py-op">,</tt> <tt class="py-op">(</tt><tt class="py-name">list</tt><tt class="py-op">,</tt> <tt class="py-name">tuple</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4148"></a><tt class="py-lineno">4148</tt>  <tt class="py-line">                <tt class="py-name">result</tt><tt class="py-op">.</tt><tt class="py-name">extend</tt><tt class="py-op">(</tt><tt id="link-1259" class="py-name"><a title="Priithon.useful.flatten" class="py-name" href="#" onclick="return doclink('link-1259', 'flatten', 'link-1257');">flatten</a></tt><tt class="py-op">(</tt><tt class="py-name">el</tt><tt class="py-op">,</tt> <tt class="py-name">mode</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L4149"></a><tt class="py-lineno">4149</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4150"></a><tt class="py-lineno">4150</tt>  <tt class="py-line">                <tt class="py-name">result</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">el</tt><tt class="py-op">)</tt> </tt>
<a name="L4151"></a><tt class="py-lineno">4151</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">mode</tt><tt class="py-op">[</tt><tt class="py-op">:</tt><tt class="py-number">3</tt><tt class="py-op">]</tt> <tt class="py-op">==</tt> <tt class="py-string">"lis"</tt><tt class="py-op">:</tt> </tt>
<a name="L4152"></a><tt class="py-lineno">4152</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">el</tt> <tt class="py-keyword">in</tt> <tt id="link-1260" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1260', 'x', 'link-481');">x</a></tt><tt class="py-op">:</tt> </tt>
<a name="L4153"></a><tt class="py-lineno">4153</tt>  <tt class="py-line">            <tt class="py-keyword">if</tt> <tt class="py-name">isinstance</tt><tt class="py-op">(</tt><tt class="py-name">el</tt><tt class="py-op">,</tt> <tt class="py-name">list</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4154"></a><tt class="py-lineno">4154</tt>  <tt class="py-line">                <tt class="py-name">result</tt><tt class="py-op">.</tt><tt class="py-name">extend</tt><tt class="py-op">(</tt><tt id="link-1261" class="py-name"><a title="Priithon.useful.flatten" class="py-name" href="#" onclick="return doclink('link-1261', 'flatten', 'link-1257');">flatten</a></tt><tt class="py-op">(</tt><tt class="py-name">el</tt><tt class="py-op">,</tt> <tt class="py-name">mode</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L4155"></a><tt class="py-lineno">4155</tt>  <tt class="py-line">            <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4156"></a><tt class="py-lineno">4156</tt>  <tt class="py-line">                <tt class="py-name">result</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-name">el</tt><tt class="py-op">)</tt> </tt>
<a name="L4157"></a><tt class="py-lineno">4157</tt>  <tt class="py-line"> </tt>
<a name="L4158"></a><tt class="py-lineno">4158</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt class="py-name">result</tt> </tt>
</div><a name="L4159"></a><tt class="py-lineno">4159</tt>  <tt class="py-line"> </tt>
<a name="hexdump"></a><div id="hexdump-def"><a name="L4160"></a><tt class="py-lineno">4160</tt> <a class="py-toggle" href="#" id="hexdump-toggle" onclick="return toggle('hexdump');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#hexdump">hexdump</a><tt class="py-op">(</tt><tt class="py-param">s</tt><tt class="py-op">,</tt> <tt class="py-param">numsPerLine</tt><tt class="py-op">=</tt><tt class="py-number">16</tt><tt class="py-op">,</tt> <tt class="py-param">ret</tt><tt class="py-op">=</tt><tt id="link-1262" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1262', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="hexdump-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="hexdump-expanded"><a name="L4161"></a><tt class="py-lineno">4161</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L4162"></a><tt class="py-lineno">4162</tt>  <tt class="py-line"><tt class="py-docstring">    dump any kind of string, ascii, encoded, or unicode, </tt> </tt>
<a name="L4163"></a><tt class="py-lineno">4163</tt>  <tt class="py-line"><tt class="py-docstring">    using the standard hex dump output format.</tt> </tt>
<a name="L4164"></a><tt class="py-lineno">4164</tt>  <tt class="py-line"><tt class="py-docstring">    This is similar to the unix `hexdump` command.</tt> </tt>
<a name="L4165"></a><tt class="py-lineno">4165</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L4166"></a><tt class="py-lineno">4166</tt>  <tt class="py-line"><tt class="py-docstring">    print `numsPerLine` characters (numbers!) per line.</tt> </tt>
<a name="L4167"></a><tt class="py-lineno">4167</tt>  <tt class="py-line"><tt class="py-docstring">    (for unicode each char counts as 2)</tt> </tt>
<a name="L4168"></a><tt class="py-lineno">4168</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4169"></a><tt class="py-lineno">4169</tt>  <tt class="py-line"><tt class="py-docstring">    if `ret` is False: print dump to stddout</tt> </tt>
<a name="L4170"></a><tt class="py-lineno">4170</tt>  <tt class="py-line"><tt class="py-docstring">    else return it as string</tt> </tt>
<a name="L4171"></a><tt class="py-lineno">4171</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4172"></a><tt class="py-lineno">4172</tt>  <tt class="py-line"><tt class="py-docstring">    (inspired by http://code.activestate.com/recipes/572181/)</tt> </tt>
<a name="L4173"></a><tt class="py-lineno">4173</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L4174"></a><tt class="py-lineno">4174</tt>  <tt class="py-line">    <tt class="py-name">FILTER</tt> <tt class="py-op">=</tt> <tt class="py-string">''</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-op">(</tt><tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">repr</tt><tt class="py-op">(</tt><tt class="py-name">chr</tt><tt class="py-op">(</tt><tt id="link-1263" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1263', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">3</tt><tt class="py-op">)</tt> <tt class="py-keyword">and</tt> <tt class="py-name">chr</tt><tt class="py-op">(</tt><tt id="link-1264" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1264', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt> <tt class="py-keyword">or</tt> <tt class="py-string">'.'</tt>  </tt>
<a name="L4175"></a><tt class="py-lineno">4175</tt>  <tt class="py-line">                      <tt class="py-keyword">for</tt> <tt id="link-1265" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1265', 'x', 'link-481');">x</a></tt> <tt class="py-keyword">in</tt> <tt id="link-1266" class="py-name"><a title="Priithon.plt.plot_objects.axis_object.range" class="py-name" href="#" onclick="return doclink('link-1266', 'range', 'link-60');">range</a></tt><tt class="py-op">(</tt><tt class="py-number">256</tt><tt class="py-op">)</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L4176"></a><tt class="py-lineno">4176</tt>  <tt class="py-line"> </tt>
<a name="L4177"></a><tt class="py-lineno">4177</tt>  <tt class="py-line">    <tt class="py-string">""" dump any string, ascii or encoded, to formatted hex output """</tt> </tt>
<a name="L4178"></a><tt class="py-lineno">4178</tt>  <tt class="py-line">    <tt class="py-keyword">def</tt> <tt class="py-def-name">dumpString</tt><tt class="py-op">(</tt><tt class="py-param">src</tt><tt class="py-op">,</tt> <tt class="py-param">length</tt><tt class="py-op">=</tt><tt class="py-number">16</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4179"></a><tt class="py-lineno">4179</tt>  <tt class="py-line">        <tt class="py-name">result</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L4180"></a><tt class="py-lineno">4180</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt id="link-1267" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1267', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">xrange</tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">src</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">length</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4181"></a><tt class="py-lineno">4181</tt>  <tt class="py-line">           <tt class="py-name">chars</tt> <tt class="py-op">=</tt> <tt class="py-name">src</tt><tt class="py-op">[</tt><tt id="link-1268" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1268', 'i', 'link-65');">i</a></tt><tt class="py-op">:</tt><tt id="link-1269" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1269', 'i', 'link-65');">i</a></tt><tt class="py-op">+</tt><tt class="py-name">length</tt><tt class="py-op">]</tt> </tt>
<a name="L4182"></a><tt class="py-lineno">4182</tt>  <tt class="py-line">           <tt class="py-name">hex</tt> <tt class="py-op">=</tt> <tt class="py-string">' '</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-string">"%02x"</tt> <tt class="py-op">%</tt> <tt class="py-name">ord</tt><tt class="py-op">(</tt><tt id="link-1270" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1270', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt> <tt class="py-keyword">for</tt> <tt id="link-1271" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1271', 'x', 'link-481');">x</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">chars</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L4183"></a><tt class="py-lineno">4183</tt>  <tt class="py-line">           <tt class="py-name">printable</tt> <tt class="py-op">=</tt> <tt class="py-string">''</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-string">"%s"</tt> <tt class="py-op">%</tt> <tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">ord</tt><tt class="py-op">(</tt><tt id="link-1272" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1272', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt> <tt class="py-op">&lt;=</tt> <tt class="py-number">127</tt> <tt class="py-keyword">and</tt> <tt class="py-name">FILTER</tt><tt class="py-op">[</tt><tt class="py-name">ord</tt><tt class="py-op">(</tt><tt id="link-1273" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1273', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-keyword">or</tt> <tt class="py-string">'.'</tt><tt class="py-op">)</tt> <tt class="py-keyword">for</tt> <tt id="link-1274" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1274', 'x', 'link-481');">x</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">chars</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L4184"></a><tt class="py-lineno">4184</tt>  <tt class="py-line">           <tt class="py-name">result</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">"%04x  %-*s  %s"</tt> <tt class="py-op">%</tt> <tt class="py-op">(</tt><tt id="link-1275" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1275', 'i', 'link-65');">i</a></tt><tt class="py-op">,</tt> <tt class="py-name">length</tt><tt class="py-op">*</tt><tt class="py-number">3</tt><tt class="py-op">,</tt> <tt class="py-name">hex</tt><tt class="py-op">,</tt> <tt class="py-name">printable</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L4185"></a><tt class="py-lineno">4185</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-string">'\n'</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">result</tt><tt class="py-op">)</tt> </tt>
</div><a name="L4186"></a><tt class="py-lineno">4186</tt>  <tt class="py-line"> </tt>
<a name="L4187"></a><tt class="py-lineno">4187</tt>  <tt class="py-line">    <tt class="py-string">""" dump unicode string to formatted hex output """</tt> </tt>
<a name="L4188"></a><tt class="py-lineno">4188</tt>  <tt class="py-line">    <tt class="py-keyword">def</tt> <tt class="py-def-name">dumpUnicodeString</tt><tt class="py-op">(</tt><tt class="py-param">src</tt><tt class="py-op">,</tt> <tt class="py-param">length</tt><tt class="py-op">=</tt><tt class="py-number">8</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4189"></a><tt class="py-lineno">4189</tt>  <tt class="py-line">        <tt class="py-name">result</tt> <tt class="py-op">=</tt> <tt class="py-op">[</tt><tt class="py-op">]</tt> </tt>
<a name="L4190"></a><tt class="py-lineno">4190</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt id="link-1276" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1276', 'i', 'link-65');">i</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">xrange</tt><tt class="py-op">(</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">src</tt><tt class="py-op">)</tt><tt class="py-op">,</tt> <tt class="py-name">length</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4191"></a><tt class="py-lineno">4191</tt>  <tt class="py-line">           <tt class="py-name">unichars</tt> <tt class="py-op">=</tt> <tt class="py-name">src</tt><tt class="py-op">[</tt><tt id="link-1277" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1277', 'i', 'link-65');">i</a></tt><tt class="py-op">:</tt><tt id="link-1278" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1278', 'i', 'link-65');">i</a></tt><tt class="py-op">+</tt><tt class="py-name">length</tt><tt class="py-op">]</tt> </tt>
<a name="L4192"></a><tt class="py-lineno">4192</tt>  <tt class="py-line">           <tt class="py-name">hex</tt> <tt class="py-op">=</tt> <tt class="py-string">' '</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-string">"%04x"</tt> <tt class="py-op">%</tt> <tt class="py-name">ord</tt><tt class="py-op">(</tt><tt id="link-1279" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1279', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt> <tt class="py-keyword">for</tt> <tt id="link-1280" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1280', 'x', 'link-481');">x</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">unichars</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L4193"></a><tt class="py-lineno">4193</tt>  <tt class="py-line">           <tt class="py-name">printable</tt> <tt class="py-op">=</tt> <tt class="py-string">''</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-op">[</tt><tt class="py-string">"%s"</tt> <tt class="py-op">%</tt> <tt class="py-op">(</tt><tt class="py-op">(</tt><tt class="py-name">ord</tt><tt class="py-op">(</tt><tt id="link-1281" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1281', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt> <tt class="py-op">&lt;=</tt> <tt class="py-number">127</tt> <tt class="py-keyword">and</tt> <tt class="py-name">FILTER</tt><tt class="py-op">[</tt><tt class="py-name">ord</tt><tt class="py-op">(</tt><tt id="link-1282" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1282', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> <tt class="py-keyword">or</tt> <tt class="py-string">'.'</tt><tt class="py-op">)</tt> <tt class="py-keyword">for</tt> <tt id="link-1283" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1283', 'x', 'link-481');">x</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">unichars</tt><tt class="py-op">]</tt><tt class="py-op">)</tt> </tt>
<a name="L4194"></a><tt class="py-lineno">4194</tt>  <tt class="py-line">           <tt class="py-name">result</tt><tt class="py-op">.</tt><tt class="py-name">append</tt><tt class="py-op">(</tt><tt class="py-string">"%04x  %-*s  %s"</tt> <tt class="py-op">%</tt> <tt class="py-op">(</tt><tt id="link-1284" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1284', 'i', 'link-65');">i</a></tt><tt class="py-op">*</tt><tt class="py-number">2</tt><tt class="py-op">,</tt> <tt class="py-name">length</tt><tt class="py-op">*</tt><tt class="py-number">5</tt><tt class="py-op">,</tt> <tt class="py-name">hex</tt><tt class="py-op">,</tt> <tt class="py-name">printable</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L4195"></a><tt class="py-lineno">4195</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-string">'\n'</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">result</tt><tt class="py-op">)</tt> </tt>
</div><a name="L4196"></a><tt class="py-lineno">4196</tt>  <tt class="py-line"> </tt>
<a name="L4197"></a><tt class="py-lineno">4197</tt>  <tt class="py-line"> </tt>
<a name="L4198"></a><tt class="py-lineno">4198</tt>  <tt class="py-line"> </tt>
<a name="L4199"></a><tt class="py-lineno">4199</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">isinstance</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">,</tt> <tt class="py-name">str</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4200"></a><tt class="py-lineno">4200</tt>  <tt class="py-line">        <tt class="py-name">res</tt> <tt class="py-op">=</tt> <tt class="py-name">dumpString</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">,</tt> <tt class="py-name">numsPerLine</tt><tt class="py-op">)</tt> </tt>
<a name="L4201"></a><tt class="py-lineno">4201</tt>  <tt class="py-line">    <tt class="py-keyword">elif</tt> <tt class="py-name">isinstance</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">,</tt> <tt class="py-name">unicode</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4202"></a><tt class="py-lineno">4202</tt>  <tt class="py-line">        <tt class="py-name">res</tt> <tt class="py-op">=</tt> <tt class="py-name">dumpUnicodeString</tt><tt class="py-op">(</tt><tt class="py-name">s</tt><tt class="py-op">,</tt> <tt class="py-name">numsPerLine</tt> <tt class="py-op">//</tt><tt class="py-number">2</tt><tt class="py-op">)</tt> </tt>
<a name="L4203"></a><tt class="py-lineno">4203</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4204"></a><tt class="py-lineno">4204</tt>  <tt class="py-line">        <tt class="py-keyword">raise</tt> <tt class="py-name">ValueError</tt><tt class="py-op">,</tt> <tt class="py-string">"s must be of type unicode or str"</tt> </tt>
<a name="L4205"></a><tt class="py-lineno">4205</tt>  <tt class="py-line"> </tt>
<a name="L4206"></a><tt class="py-lineno">4206</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">ret</tt><tt class="py-op">:</tt> </tt>
<a name="L4207"></a><tt class="py-lineno">4207</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">res</tt> </tt>
<a name="L4208"></a><tt class="py-lineno">4208</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4209"></a><tt class="py-lineno">4209</tt>  <tt class="py-line">        <tt class="py-keyword">print</tt> <tt class="py-name">res</tt> </tt>
</div><a name="L4210"></a><tt class="py-lineno">4210</tt>  <tt class="py-line"> </tt>
<a name="zip_extractall"></a><div id="zip_extractall-def"><a name="L4211"></a><tt class="py-lineno">4211</tt> <a class="py-toggle" href="#" id="zip_extractall-toggle" onclick="return toggle('zip_extractall');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#zip_extractall">zip_extractall</a><tt class="py-op">(</tt><tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">outDir</tt><tt class="py-op">=</tt><tt class="py-string">""</tt><tt class="py-op">,</tt> <tt class="py-param">percent</tt><tt class="py-op">=</tt><tt class="py-number">0</tt><tt class="py-op">,</tt> <tt class="py-param">verbose</tt><tt class="py-op">=</tt><tt id="link-1285" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1285', 'False', 'link-28');">False</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="zip_extractall-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="zip_extractall-expanded"><a name="L4212"></a><tt class="py-lineno">4212</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L4213"></a><tt class="py-lineno">4213</tt>  <tt class="py-line"><tt class="py-docstring">    extract zip file into a directory (default to current working dir)</tt> </tt>
<a name="L4214"></a><tt class="py-lineno">4214</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4215"></a><tt class="py-lineno">4215</tt>  <tt class="py-line"><tt class="py-docstring">    if verbose: print line for each file extracted</tt> </tt>
<a name="L4216"></a><tt class="py-lineno">4216</tt>  <tt class="py-line"><tt class="py-docstring">    else(!) if percent&gt;0: print note every `percent` increments</tt> </tt>
<a name="L4217"></a><tt class="py-lineno">4217</tt>  <tt class="py-line"><tt class="py-docstring">            (measured by total number of files to be extracted)</tt> </tt>
<a name="L4218"></a><tt class="py-lineno">4218</tt>  <tt class="py-line"><tt class="py-docstring"></tt> </tt>
<a name="L4219"></a><tt class="py-lineno">4219</tt>  <tt class="py-line"><tt class="py-docstring">    (inspired by http://code.activestate.com/recipes/252508 By Doug Tolton)</tt> </tt>
<a name="L4220"></a><tt class="py-lineno">4220</tt>  <tt class="py-line"><tt class="py-docstring">    (in Python 2.6 this will be zipfile.extractall())</tt> </tt>
<a name="L4221"></a><tt class="py-lineno">4221</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L4222"></a><tt class="py-lineno">4222</tt>  <tt class="py-line">    <tt class="py-keyword">import</tt> <tt class="py-name">zipfile</tt><tt class="py-op">,</tt> <tt class="py-name">os</tt> </tt>
<a name="L4223"></a><tt class="py-lineno">4223</tt>  <tt class="py-line"> </tt>
<a name="L4224"></a><tt class="py-lineno">4224</tt>  <tt class="py-line">    <tt class="py-string">'''seb</tt> </tt>
<a name="L4225"></a><tt class="py-lineno">4225</tt>  <tt class="py-line"><tt class="py-string">    def _listdirs(zf):</tt> </tt>
<a name="L4226"></a><tt class="py-lineno">4226</tt>  <tt class="py-line"><tt class="py-string">        """ Grabs all the directories in the zip structure</tt> </tt>
<a name="L4227"></a><tt class="py-lineno">4227</tt>  <tt class="py-line"><tt class="py-string">        This is necessary to create the structure before trying</tt> </tt>
<a name="L4228"></a><tt class="py-lineno">4228</tt>  <tt class="py-line"><tt class="py-string">        to extract the file to it. """</tt> </tt>
<a name="L4229"></a><tt class="py-lineno">4229</tt>  <tt class="py-line"><tt class="py-string">        dirs = []</tt> </tt>
<a name="L4230"></a><tt class="py-lineno">4230</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L4231"></a><tt class="py-lineno">4231</tt>  <tt class="py-line"><tt class="py-string">        for name in zf.namelist():</tt> </tt>
<a name="L4232"></a><tt class="py-lineno">4232</tt>  <tt class="py-line"><tt class="py-string">            if name.endswith('/'):</tt> </tt>
<a name="L4233"></a><tt class="py-lineno">4233</tt>  <tt class="py-line"><tt class="py-string">                dirs.append(name)</tt> </tt>
<a name="L4234"></a><tt class="py-lineno">4234</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L4235"></a><tt class="py-lineno">4235</tt>  <tt class="py-line"><tt class="py-string">        dirs.sort()</tt> </tt>
<a name="L4236"></a><tt class="py-lineno">4236</tt>  <tt class="py-line"><tt class="py-string">        return dirs</tt> </tt>
<a name="L4237"></a><tt class="py-lineno">4237</tt>  <tt class="py-line"><tt class="py-string">    def _makedirs(directories, basedir):</tt> </tt>
<a name="L4238"></a><tt class="py-lineno">4238</tt>  <tt class="py-line"><tt class="py-string">        """ Create any directories that don't currently exist """</tt> </tt>
<a name="L4239"></a><tt class="py-lineno">4239</tt>  <tt class="py-line"><tt class="py-string">        for dir in directories:</tt> </tt>
<a name="L4240"></a><tt class="py-lineno">4240</tt>  <tt class="py-line"><tt class="py-string">            curdir = os.path.join(basedir, dir)</tt> </tt>
<a name="L4241"></a><tt class="py-lineno">4241</tt>  <tt class="py-line"><tt class="py-string">            if not os.path.exists(curdir):</tt> </tt>
<a name="L4242"></a><tt class="py-lineno">4242</tt>  <tt class="py-line"><tt class="py-string">                os.mkdir(curdir)</tt> </tt>
<a name="L4243"></a><tt class="py-lineno">4243</tt>  <tt class="py-line"><tt class="py-string"></tt> </tt>
<a name="L4244"></a><tt class="py-lineno">4244</tt>  <tt class="py-line"><tt class="py-string">    def _createstructure(zf, outDir):</tt> </tt>
<a name="L4245"></a><tt class="py-lineno">4245</tt>  <tt class="py-line"><tt class="py-string">        _makedirs(_listdirs(zf), outDir)</tt> </tt>
<a name="L4246"></a><tt class="py-lineno">4246</tt>  <tt class="py-line"><tt class="py-string">    '''</tt> </tt>
<a name="L4247"></a><tt class="py-lineno">4247</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">outDir</tt><tt class="py-op">:</tt> </tt>
<a name="L4248"></a><tt class="py-lineno">4248</tt>  <tt class="py-line">        <tt id="link-1286" class="py-name"><a title="Priithon.useful.path_mkdir" class="py-name" href="#" onclick="return doclink('link-1286', 'path_mkdir', 'link-1155');">path_mkdir</a></tt><tt class="py-op">(</tt><tt class="py-name">outDir</tt><tt class="py-op">)</tt> <tt class="py-comment"># silent noop if already exists</tt> </tt>
<a name="L4249"></a><tt class="py-lineno">4249</tt>  <tt class="py-line"> </tt>
<a name="L4250"></a><tt class="py-lineno">4250</tt>  <tt class="py-line">    <tt class="py-name">zf</tt> <tt class="py-op">=</tt> <tt class="py-name">zipfile</tt><tt class="py-op">.</tt><tt class="py-name">ZipFile</tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">)</tt> </tt>
<a name="L4251"></a><tt class="py-lineno">4251</tt>  <tt class="py-line"> </tt>
<a name="L4252"></a><tt class="py-lineno">4252</tt>  <tt class="py-line">    <tt class="py-comment">#seb # create directory structure to house files</tt> </tt>
<a name="L4253"></a><tt class="py-lineno">4253</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment">#seb _createstructure(zf, outDir)</tt> </tt>
<a name="L4254"></a><tt class="py-lineno">4254</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L4255"></a><tt class="py-lineno">4255</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">percent</tt><tt class="py-op">:</tt> </tt>
<a name="L4256"></a><tt class="py-lineno">4256</tt>  <tt class="py-line">        <tt class="py-name">num_files</tt> <tt class="py-op">=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">zf</tt><tt class="py-op">.</tt><tt class="py-name">namelist</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L4257"></a><tt class="py-lineno">4257</tt>  <tt class="py-line">        <tt class="py-name">divisions</tt> <tt class="py-op">=</tt> <tt class="py-number">100</tt> <tt class="py-op">/</tt> <tt class="py-name">percent</tt> </tt>
<a name="L4258"></a><tt class="py-lineno">4258</tt>  <tt class="py-line">        <tt class="py-name">perc</tt> <tt class="py-op">=</tt> <tt class="py-name">int</tt><tt class="py-op">(</tt><tt class="py-name">num_files</tt> <tt class="py-op">/</tt> <tt class="py-name">divisions</tt><tt class="py-op">)</tt> </tt>
<a name="L4259"></a><tt class="py-lineno">4259</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4260"></a><tt class="py-lineno">4260</tt>  <tt class="py-line">        <tt class="py-name">perc</tt><tt class="py-op">=</tt><tt class="py-number">0</tt> </tt>
<a name="L4261"></a><tt class="py-lineno">4261</tt>  <tt class="py-line"> </tt>
<a name="L4262"></a><tt class="py-lineno">4262</tt>  <tt class="py-line">    <tt class="py-comment"># extract files to directory structure</tt> </tt>
<a name="L4263"></a><tt class="py-lineno">4263</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">for</tt> <tt id="link-1287" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1287', 'i', 'link-65');">i</a></tt><tt class="py-op">,</tt> <tt id="link-1288" class="py-name"><a title="Priithon.py.crust.Crust.name
Priithon.py.crust.CrustFrame.name
Priithon.py.filling.Filling.name
Priithon.py.filling.FillingFrame.name
Priithon.py.filling.FillingText.name
Priithon.py.filling.FillingTree.name
Priithon.py.shell.Shell.name
Priithon.py.shell.ShellFacade.name
Priithon.py.shell.ShellFrame.name" class="py-name" href="#" onclick="return doclink('link-1288', 'name', 'link-20');">name</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">enumerate</tt><tt class="py-op">(</tt><tt class="py-name">zf</tt><tt class="py-op">.</tt><tt class="py-name">namelist</tt><tt class="py-op">(</tt><tt class="py-op">)</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4264"></a><tt class="py-lineno">4264</tt>  <tt class="py-line"> </tt>
<a name="L4265"></a><tt class="py-lineno">4265</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">verbose</tt> <tt class="py-op">==</tt> <tt id="link-1289" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-1289', 'True', 'link-38');">True</a></tt><tt class="py-op">:</tt> </tt>
<a name="L4266"></a><tt class="py-lineno">4266</tt>  <tt class="py-line">            <tt class="py-keyword">print</tt> <tt class="py-string">"Extracting %s"</tt> <tt class="py-op">%</tt> <tt id="link-1290" class="py-name"><a title="Priithon.py.crust.Crust.name
Priithon.py.crust.CrustFrame.name
Priithon.py.filling.Filling.name
Priithon.py.filling.FillingFrame.name
Priithon.py.filling.FillingText.name
Priithon.py.filling.FillingTree.name
Priithon.py.shell.Shell.name
Priithon.py.shell.ShellFacade.name
Priithon.py.shell.ShellFrame.name" class="py-name" href="#" onclick="return doclink('link-1290', 'name', 'link-20');">name</a></tt> </tt>
<a name="L4267"></a><tt class="py-lineno">4267</tt>  <tt class="py-line">        <tt class="py-keyword">elif</tt> <tt class="py-name">perc</tt> <tt class="py-op">&gt;</tt> <tt class="py-number">0</tt> <tt class="py-keyword">and</tt> <tt class="py-op">(</tt><tt id="link-1291" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1291', 'i', 'link-65');">i</a></tt> <tt class="py-op">%</tt> <tt class="py-name">perc</tt><tt class="py-op">)</tt> <tt class="py-op">==</tt> <tt class="py-number">0</tt> <tt class="py-keyword">and</tt> <tt id="link-1292" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1292', 'i', 'link-65');">i</a></tt> <tt class="py-op">&gt;</tt> <tt class="py-number">0</tt><tt class="py-op">:</tt> </tt>
<a name="L4268"></a><tt class="py-lineno">4268</tt>  <tt class="py-line">            <tt class="py-name">complete</tt> <tt class="py-op">=</tt> <tt class="py-name">int</tt> <tt class="py-op">(</tt><tt id="link-1293" class="py-name"><a title="Priithon.viewer.i
Priithon.viewer2.i
Priithon.viewerCommon.i" class="py-name" href="#" onclick="return doclink('link-1293', 'i', 'link-65');">i</a></tt> <tt class="py-op">/</tt> <tt class="py-name">perc</tt><tt class="py-op">)</tt> <tt class="py-op">*</tt> <tt class="py-name">percent</tt> </tt>
<a name="L4269"></a><tt class="py-lineno">4269</tt>  <tt class="py-line">            <tt class="py-keyword">print</tt> <tt class="py-string">"%s%% complete"</tt> <tt class="py-op">%</tt> <tt class="py-name">complete</tt> </tt>
<a name="L4270"></a><tt class="py-lineno">4270</tt>  <tt class="py-line"> </tt>
<a name="L4271"></a><tt class="py-lineno">4271</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-keyword">not</tt> <tt id="link-1294" class="py-name"><a title="Priithon.py.crust.Crust.name
Priithon.py.crust.CrustFrame.name
Priithon.py.filling.Filling.name
Priithon.py.filling.FillingFrame.name
Priithon.py.filling.FillingText.name
Priithon.py.filling.FillingTree.name
Priithon.py.shell.Shell.name
Priithon.py.shell.ShellFacade.name
Priithon.py.shell.ShellFrame.name" class="py-name" href="#" onclick="return doclink('link-1294', 'name', 'link-20');">name</a></tt><tt class="py-op">.</tt><tt class="py-name">endswith</tt><tt class="py-op">(</tt><tt class="py-string">'/'</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4272"></a><tt class="py-lineno">4272</tt>  <tt class="py-line">            <tt class="py-name">fn1</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">outDir</tt><tt class="py-op">,</tt> <tt id="link-1295" class="py-name"><a title="Priithon.py.crust.Crust.name
Priithon.py.crust.CrustFrame.name
Priithon.py.filling.Filling.name
Priithon.py.filling.FillingFrame.name
Priithon.py.filling.FillingText.name
Priithon.py.filling.FillingTree.name
Priithon.py.shell.Shell.name
Priithon.py.shell.ShellFacade.name
Priithon.py.shell.ShellFrame.name" class="py-name" href="#" onclick="return doclink('link-1295', 'name', 'link-20');">name</a></tt><tt class="py-op">)</tt> </tt>
<a name="L4273"></a><tt class="py-lineno">4273</tt>  <tt class="py-line">            <tt id="link-1296" class="py-name"><a title="Priithon.useful.path_mkdir" class="py-name" href="#" onclick="return doclink('link-1296', 'path_mkdir', 'link-1155');">path_mkdir</a></tt><tt class="py-op">(</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">dirname</tt><tt class="py-op">(</tt><tt class="py-name">fn1</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> <tt class="py-comment"># silent noop if already exists</tt> </tt>
<a name="L4274"></a><tt class="py-lineno">4274</tt>  <tt class="py-line">            <tt class="py-name">outfile</tt> <tt class="py-op">=</tt> <tt id="link-1297" class="py-name"><a title="Priithon.Mrc.open
Priithon.plt.dumb_shelve.open
Priithon.plt.dumbdbm_patched.open
Priithon.py.buffer.Buffer.open" class="py-name" href="#" onclick="return doclink('link-1297', 'open', 'link-822');">open</a></tt><tt class="py-op">(</tt><tt class="py-name">fn1</tt><tt class="py-op">,</tt> <tt class="py-string">'wb'</tt><tt class="py-op">)</tt> </tt>
<a name="L4275"></a><tt class="py-lineno">4275</tt>  <tt class="py-line">            <tt class="py-name">outfile</tt><tt class="py-op">.</tt><tt id="link-1298" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.write
Priithon.py.document.Document.write
Priithon.py.editwindow.EditWindow.write
Priithon.py.pseudo.PseudoFile.write
Priithon.py.shell.Shell.write" class="py-name" href="#" onclick="return doclink('link-1298', 'write', 'link-979');">write</a></tt><tt class="py-op">(</tt><tt class="py-name">zf</tt><tt class="py-op">.</tt><tt id="link-1299" class="py-name"><a title="Priithon.py.document.Document.read" class="py-name" href="#" onclick="return doclink('link-1299', 'read', 'link-978');">read</a></tt><tt class="py-op">(</tt><tt id="link-1300" class="py-name"><a title="Priithon.py.crust.Crust.name
Priithon.py.crust.CrustFrame.name
Priithon.py.filling.Filling.name
Priithon.py.filling.FillingFrame.name
Priithon.py.filling.FillingText.name
Priithon.py.filling.FillingTree.name
Priithon.py.shell.Shell.name
Priithon.py.shell.ShellFacade.name
Priithon.py.shell.ShellFrame.name" class="py-name" href="#" onclick="return doclink('link-1300', 'name', 'link-20');">name</a></tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L4276"></a><tt class="py-lineno">4276</tt>  <tt class="py-line">            <tt class="py-name">outfile</tt><tt class="py-op">.</tt><tt id="link-1301" class="py-name" targets="Method Priithon.Mrc.Mrc2.flush()=Priithon.Mrc.Mrc2-class.html#flush,Method Priithon.Scientific_IO_TextFile.TextFile.flush()=Priithon.Scientific_IO_TextFile.TextFile-class.html#flush,Method Priithon.py.pseudo.PseudoFile.flush()=Priithon.py.pseudo.PseudoFile-class.html#flush"><a title="Priithon.Mrc.Mrc2.flush
Priithon.Scientific_IO_TextFile.TextFile.flush
Priithon.py.pseudo.PseudoFile.flush" class="py-name" href="#" onclick="return doclink('link-1301', 'flush', 'link-1301');">flush</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
<a name="L4277"></a><tt class="py-lineno">4277</tt>  <tt class="py-line">            <tt class="py-name">outfile</tt><tt class="py-op">.</tt><tt id="link-1302" class="py-name"><a title="Priithon.Mrc.Mrc.close
Priithon.Mrc.Mrc2.close
Priithon.Scientific_IO_TextFile.TextFile.close
Priithon.plt.dumbdbm_patched._Database.close
Priithon.plt.interface.close
Priithon.readerSPE.File.close" class="py-name" href="#" onclick="return doclink('link-1302', 'close', 'link-980');">close</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L4278"></a><tt class="py-lineno">4278</tt>  <tt class="py-line"> </tt>
<a name="L4279"></a><tt class="py-lineno">4279</tt>  <tt class="py-line"> </tt>
<a name="zip_zipDir"></a><div id="zip_zipDir-def"><a name="L4280"></a><tt class="py-lineno">4280</tt> <a class="py-toggle" href="#" id="zip_zipDir-toggle" onclick="return toggle('zip_zipDir');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#zip_zipDir">zip_zipDir</a><tt class="py-op">(</tt><tt class="py-param">fn</tt><tt class="py-op">,</tt> <tt class="py-param">dir</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="zip_zipDir-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="zip_zipDir-expanded"><a name="L4281"></a><tt class="py-lineno">4281</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L4282"></a><tt class="py-lineno">4282</tt>  <tt class="py-line"><tt class="py-docstring">    create new zip archive with filename `fn` and</tt> </tt>
<a name="L4283"></a><tt class="py-lineno">4283</tt>  <tt class="py-line"><tt class="py-docstring">    put everything inside directory `dir` into it</tt> </tt>
<a name="L4284"></a><tt class="py-lineno">4284</tt>  <tt class="py-line"><tt class="py-docstring">    </tt> </tt>
<a name="L4285"></a><tt class="py-lineno">4285</tt>  <tt class="py-line"><tt class="py-docstring">    (inspired by http://coreygoldberg.blogspot.com/2009/07/python-zip-directories-recursively.html)</tt> </tt>
<a name="L4286"></a><tt class="py-lineno">4286</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L4287"></a><tt class="py-lineno">4287</tt>  <tt class="py-line">    <tt class="py-comment"># check: </tt> </tt>
<a name="L4288"></a><tt class="py-lineno">4288</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># CHECK how about unicode names (encode in ASCII needed ??)</tt> </tt>
<a name="L4289"></a><tt class="py-lineno">4289</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># http://coreygoldberg.blogspot.com/2009/07/python-zip-directories-recursively.html</tt> </tt>
<a name="L4290"></a><tt class="py-lineno">4290</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># http://bytes.com/topic/python/answers/851018-how-zip-directory-python-using-zipfile</tt> </tt>
<a name="L4291"></a><tt class="py-lineno">4291</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># http://bytes.com/topic/python/answers/845051-backup-zips</tt> </tt>
<a name="L4292"></a><tt class="py-lineno">4292</tt>  <tt class="py-line"><tt class="py-comment"></tt>     </tt>
<a name="L4293"></a><tt class="py-lineno">4293</tt>  <tt class="py-line">    <tt class="py-comment">#def zipper(dir, zip_file):</tt> </tt>
<a name="L4294"></a><tt class="py-lineno">4294</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">import</tt> <tt class="py-name">zipfile</tt><tt class="py-op">,</tt> <tt class="py-name">os</tt> </tt>
<a name="L4295"></a><tt class="py-lineno">4295</tt>  <tt class="py-line">    <tt class="py-name">zip</tt> <tt class="py-op">=</tt> <tt class="py-name">zipfile</tt><tt class="py-op">.</tt><tt class="py-name">ZipFile</tt><tt class="py-op">(</tt><tt class="py-name">fn</tt><tt class="py-op">,</tt> <tt class="py-string">'w'</tt><tt class="py-op">,</tt> <tt class="py-name">compression</tt><tt class="py-op">=</tt><tt class="py-name">zipfile</tt><tt class="py-op">.</tt><tt class="py-name">ZIP_DEFLATED</tt><tt class="py-op">)</tt> </tt>
<a name="L4296"></a><tt class="py-lineno">4296</tt>  <tt class="py-line">    <tt class="py-name">root_len</tt> <tt class="py-op">=</tt> <tt class="py-name">len</tt><tt class="py-op">(</tt><tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">abspath</tt><tt class="py-op">(</tt><tt class="py-name">dir</tt><tt class="py-op">)</tt><tt class="py-op">)</tt> </tt>
<a name="L4297"></a><tt class="py-lineno">4297</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt class="py-name">root</tt><tt class="py-op">,</tt> <tt class="py-name">dirs</tt><tt class="py-op">,</tt> <tt class="py-name">files</tt> <tt class="py-keyword">in</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">walk</tt><tt class="py-op">(</tt><tt class="py-name">dir</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4298"></a><tt class="py-lineno">4298</tt>  <tt class="py-line">        <tt class="py-name">archive_root</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">abspath</tt><tt class="py-op">(</tt><tt class="py-name">root</tt><tt class="py-op">)</tt><tt class="py-op">[</tt><tt class="py-name">root_len</tt><tt class="py-op">:</tt><tt class="py-op">]</tt> </tt>
<a name="L4299"></a><tt class="py-lineno">4299</tt>  <tt class="py-line">        <tt class="py-keyword">for</tt> <tt class="py-name">f</tt> <tt class="py-keyword">in</tt> <tt class="py-name">files</tt><tt class="py-op">:</tt> </tt>
<a name="L4300"></a><tt class="py-lineno">4300</tt>  <tt class="py-line">            <tt class="py-name">fullpath</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">root</tt><tt class="py-op">,</tt> <tt class="py-name">f</tt><tt class="py-op">)</tt> </tt>
<a name="L4301"></a><tt class="py-lineno">4301</tt>  <tt class="py-line">            <tt class="py-name">archive_name</tt> <tt class="py-op">=</tt> <tt class="py-name">os</tt><tt class="py-op">.</tt><tt class="py-name">path</tt><tt class="py-op">.</tt><tt class="py-name">join</tt><tt class="py-op">(</tt><tt class="py-name">archive_root</tt><tt class="py-op">,</tt> <tt class="py-name">f</tt><tt class="py-op">)</tt> </tt>
<a name="L4302"></a><tt class="py-lineno">4302</tt>  <tt class="py-line">            <tt class="py-comment">#seb print f</tt> </tt>
<a name="L4303"></a><tt class="py-lineno">4303</tt>  <tt class="py-line"><tt class="py-comment"></tt>            <tt class="py-name">zip</tt><tt class="py-op">.</tt><tt id="link-1303" class="py-name"><a title="Priithon.Scientific_IO_TextFile.TextFile.write
Priithon.py.document.Document.write
Priithon.py.editwindow.EditWindow.write
Priithon.py.pseudo.PseudoFile.write
Priithon.py.shell.Shell.write" class="py-name" href="#" onclick="return doclink('link-1303', 'write', 'link-979');">write</a></tt><tt class="py-op">(</tt><tt class="py-name">fullpath</tt><tt class="py-op">,</tt> <tt class="py-name">archive_name</tt><tt class="py-op">,</tt> <tt class="py-name">zipfile</tt><tt class="py-op">.</tt><tt class="py-name">ZIP_DEFLATED</tt><tt class="py-op">)</tt> </tt>
<a name="L4304"></a><tt class="py-lineno">4304</tt>  <tt class="py-line">    <tt class="py-name">zip</tt><tt class="py-op">.</tt><tt id="link-1304" class="py-name"><a title="Priithon.Mrc.Mrc.close
Priithon.Mrc.Mrc2.close
Priithon.Scientific_IO_TextFile.TextFile.close
Priithon.plt.dumbdbm_patched._Database.close
Priithon.plt.interface.close
Priithon.readerSPE.File.close" class="py-name" href="#" onclick="return doclink('link-1304', 'close', 'link-980');">close</a></tt><tt class="py-op">(</tt><tt class="py-op">)</tt> </tt>
</div><a name="L4305"></a><tt class="py-lineno">4305</tt>  <tt class="py-line">    <tt class="py-comment">#seb return zip_file</tt> </tt>
<a name="L4306"></a><tt class="py-lineno">4306</tt>  <tt class="py-line"><tt class="py-comment"></tt> </tt>
<a name="L4307"></a><tt class="py-lineno">4307</tt>  <tt class="py-line"> </tt>
<a name="L4308"></a><tt class="py-lineno">4308</tt>  <tt class="py-line"> </tt>
<a name="L4309"></a><tt class="py-lineno">4309</tt>  <tt class="py-line">     </tt>
<a name="L4310"></a><tt class="py-lineno">4310</tt>  <tt class="py-line"> </tt>
<a name="L4311"></a><tt class="py-lineno">4311</tt>  <tt class="py-line"> </tt>
<a name="L4312"></a><tt class="py-lineno">4312</tt>  <tt class="py-line"> </tt>
<a name="hasDuplicates"></a><div id="hasDuplicates-def"><a name="L4313"></a><tt class="py-lineno">4313</tt> <a class="py-toggle" href="#" id="hasDuplicates-toggle" onclick="return toggle('hasDuplicates');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#hasDuplicates">hasDuplicates</a><tt class="py-op">(</tt><tt class="py-param">s</tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="hasDuplicates-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="hasDuplicates-expanded"><a name="L4314"></a><tt class="py-lineno">4314</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L4315"></a><tt class="py-lineno">4315</tt>  <tt class="py-line"><tt class="py-docstring">    returns True or False depending on `s` having duplicate entries</tt> </tt>
<a name="L4316"></a><tt class="py-lineno">4316</tt>  <tt class="py-line"><tt class="py-docstring">    Items in `s` have to be hashable.</tt> </tt>
<a name="L4317"></a><tt class="py-lineno">4317</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L4318"></a><tt class="py-lineno">4318</tt>  <tt class="py-line"> </tt>
<a name="L4319"></a><tt class="py-lineno">4319</tt>  <tt class="py-line">    <tt class="py-name">u</tt> <tt class="py-op">=</tt> <tt class="py-op">{</tt><tt class="py-op">}</tt> </tt>
<a name="L4320"></a><tt class="py-lineno">4320</tt>  <tt class="py-line">    <tt class="py-keyword">for</tt> <tt id="link-1305" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1305', 'x', 'link-481');">x</a></tt> <tt class="py-keyword">in</tt> <tt class="py-name">s</tt><tt class="py-op">:</tt> </tt>
<a name="L4321"></a><tt class="py-lineno">4321</tt>  <tt class="py-line">        <tt class="py-keyword">if</tt> <tt class="py-name">u</tt><tt class="py-op">.</tt><tt id="link-1306" class="py-name" targets="Method Priithon.plt.dumbdbm_patched._Database.has_key()=Priithon.plt.dumbdbm_patched._Database-class.html#has_key"><a title="Priithon.plt.dumbdbm_patched._Database.has_key" class="py-name" href="#" onclick="return doclink('link-1306', 'has_key', 'link-1306');">has_key</a></tt><tt class="py-op">(</tt><tt id="link-1307" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1307', 'x', 'link-481');">x</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
<a name="L4322"></a><tt class="py-lineno">4322</tt>  <tt class="py-line">            <tt class="py-keyword">return</tt> <tt id="link-1308" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-1308', 'True', 'link-38');">True</a></tt> </tt>
<a name="L4323"></a><tt class="py-lineno">4323</tt>  <tt class="py-line">        <tt class="py-name">u</tt><tt class="py-op">[</tt><tt id="link-1309" class="py-name"><a title="Priithon.viewer.x
Priithon.viewer2.x
Priithon.viewerCommon.x" class="py-name" href="#" onclick="return doclink('link-1309', 'x', 'link-481');">x</a></tt><tt class="py-op">]</tt> <tt class="py-op">=</tt> <tt class="py-number">1</tt> </tt>
<a name="L4324"></a><tt class="py-lineno">4324</tt>  <tt class="py-line">    <tt class="py-keyword">return</tt> <tt id="link-1310" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1310', 'False', 'link-28');">False</a></tt> </tt>
</div><a name="L4325"></a><tt class="py-lineno">4325</tt>  <tt class="py-line"> </tt>
<a name="L4326"></a><tt class="py-lineno">4326</tt>  <tt class="py-line"> </tt>
<a name="normAngle"></a><div id="normAngle-def"><a name="L4327"></a><tt class="py-lineno">4327</tt> <a class="py-toggle" href="#" id="normAngle-toggle" onclick="return toggle('normAngle');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#normAngle">normAngle</a><tt class="py-op">(</tt><tt class="py-param">angle</tt><tt class="py-op">,</tt> <tt class="py-param">abs</tt><tt class="py-op">=</tt><tt id="link-1311" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1311', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">useDegree</tt> <tt class="py-op">=</tt> <tt id="link-1312" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-1312', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="normAngle-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="normAngle-expanded"><a name="L4328"></a><tt class="py-lineno">4328</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L4329"></a><tt class="py-lineno">4329</tt>  <tt class="py-line"><tt class="py-docstring">    return equivalent of `angle` in -180&lt;=..&lt;180 range</tt> </tt>
<a name="L4330"></a><tt class="py-lineno">4330</tt>  <tt class="py-line"><tt class="py-docstring">    if `abs` is True return absolute of that</tt> </tt>
<a name="L4331"></a><tt class="py-lineno">4331</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L4332"></a><tt class="py-lineno">4332</tt>  <tt class="py-line">    <tt class="py-comment"># http://mail.scipy.org/pipermail/scipy-user/2009-November/023375.html</tt> </tt>
<a name="L4333"></a><tt class="py-lineno">4333</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># http://thread.gmane.org/gmane.comp.python.scientific.user/22929</tt> </tt>
<a name="L4334"></a><tt class="py-lineno">4334</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-keyword">if</tt> <tt class="py-name">useDegree</tt><tt class="py-op">:</tt> </tt>
<a name="L4335"></a><tt class="py-lineno">4335</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1313" class="py-name" targets="Variable Priithon.mandel.fmod=Priithon.mandel-module.html#fmod,Variable Priithon.plt.fmod=Priithon.plt-module.html#fmod,Variable Priithon.plt.interface.fmod=Priithon.plt.interface-module.html#fmod,Variable Priithon.plt.plot_objects.fmod=Priithon.plt.plot_objects-module.html#fmod,Variable Priithon.plt.plot_utility.fmod=Priithon.plt.plot_utility-module.html#fmod,Variable Priithon.plt.wxplt.fmod=Priithon.plt.wxplt-module.html#fmod"><a title="Priithon.mandel.fmod
Priithon.plt.fmod
Priithon.plt.interface.fmod
Priithon.plt.plot_objects.fmod
Priithon.plt.plot_utility.fmod
Priithon.plt.wxplt.fmod" class="py-name" href="#" onclick="return doclink('link-1313', 'fmod', 'link-1313');">fmod</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt> <tt class="py-op">+</tt> <tt class="py-number">540</tt><tt class="py-op">,</tt> <tt class="py-number">360</tt><tt class="py-op">)</tt> <tt class="py-op">-</tt> <tt class="py-number">180</tt> </tt>
<a name="L4336"></a><tt class="py-lineno">4336</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4337"></a><tt class="py-lineno">4337</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1314" class="py-name"><a title="Priithon.mandel.fmod
Priithon.plt.fmod
Priithon.plt.interface.fmod
Priithon.plt.plot_objects.fmod
Priithon.plt.plot_utility.fmod
Priithon.plt.wxplt.fmod" class="py-name" href="#" onclick="return doclink('link-1314', 'fmod', 'link-1313');">fmod</a></tt><tt class="py-op">(</tt><tt class="py-name">a</tt> <tt class="py-op">+</tt> <tt class="py-number">3</tt><tt class="py-op">*</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1315" class="py-name"><a title="Priithon.mandel.pi
Priithon.plt.interface.pi
Priithon.plt.pi
Priithon.plt.plot_objects.pi
Priithon.plt.plot_utility.pi
Priithon.plt.wxplt.pi" class="py-name" href="#" onclick="return doclink('link-1315', 'pi', 'link-230');">pi</a></tt><tt class="py-op">,</tt> <tt class="py-number">2</tt><tt class="py-op">*</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1316" class="py-name"><a title="Priithon.mandel.pi
Priithon.plt.interface.pi
Priithon.plt.pi
Priithon.plt.plot_objects.pi
Priithon.plt.plot_utility.pi
Priithon.plt.wxplt.pi" class="py-name" href="#" onclick="return doclink('link-1316', 'pi', 'link-230');">pi</a></tt><tt class="py-op">)</tt> <tt class="py-op">-</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1317" class="py-name"><a title="Priithon.mandel.pi
Priithon.plt.interface.pi
Priithon.plt.pi
Priithon.plt.plot_objects.pi
Priithon.plt.plot_utility.pi
Priithon.plt.wxplt.pi" class="py-name" href="#" onclick="return doclink('link-1317', 'pi', 'link-230');">pi</a></tt> </tt>
<a name="L4338"></a><tt class="py-lineno">4338</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">abs</tt><tt class="py-op">:</tt> </tt>
<a name="L4339"></a><tt class="py-lineno">4339</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">abs</tt><tt class="py-op">(</tt><tt class="py-name">r</tt><tt class="py-op">)</tt> </tt>
<a name="L4340"></a><tt class="py-lineno">4340</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4341"></a><tt class="py-lineno">4341</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
</div><a name="L4342"></a><tt class="py-lineno">4342</tt>  <tt class="py-line"> </tt>
<a name="diffAngle"></a><div id="diffAngle-def"><a name="L4343"></a><tt class="py-lineno">4343</tt> <a class="py-toggle" href="#" id="diffAngle-toggle" onclick="return toggle('diffAngle');">-</a><tt class="py-line"><tt class="py-keyword">def</tt> <a class="py-def-name" href="Priithon.useful-module.html#diffAngle">diffAngle</a><tt class="py-op">(</tt><tt class="py-param">a1</tt><tt class="py-op">,</tt><tt class="py-param">a0</tt><tt class="py-op">,</tt> <tt class="py-param">abs</tt><tt class="py-op">=</tt><tt id="link-1318" class="py-name"><a title="Priithon.wxPyPlot.False" class="py-name" href="#" onclick="return doclink('link-1318', 'False', 'link-28');">False</a></tt><tt class="py-op">,</tt> <tt class="py-param">useDegree</tt> <tt class="py-op">=</tt> <tt id="link-1319" class="py-name"><a title="Priithon.wxPyPlot.True" class="py-name" href="#" onclick="return doclink('link-1319', 'True', 'link-38');">True</a></tt><tt class="py-op">)</tt><tt class="py-op">:</tt> </tt>
</div><div id="diffAngle-collapsed" style="display:none;" pad="++++" indent="++++"></div><div id="diffAngle-expanded"><a name="L4344"></a><tt class="py-lineno">4344</tt>  <tt class="py-line">    <tt class="py-docstring">"""</tt> </tt>
<a name="L4345"></a><tt class="py-lineno">4345</tt>  <tt class="py-line"><tt class="py-docstring">    returns a1-a0</tt> </tt>
<a name="L4346"></a><tt class="py-lineno">4346</tt>  <tt class="py-line"><tt class="py-docstring">    handle wrap-around for -180 and +180</tt> </tt>
<a name="L4347"></a><tt class="py-lineno">4347</tt>  <tt class="py-line"><tt class="py-docstring">    returned angle lies in -180&lt;=..&lt;180 range</tt> </tt>
<a name="L4348"></a><tt class="py-lineno">4348</tt>  <tt class="py-line"><tt class="py-docstring">    if `abs` is True return absolute of that</tt> </tt>
<a name="L4349"></a><tt class="py-lineno">4349</tt>  <tt class="py-line"><tt class="py-docstring">    """</tt> </tt>
<a name="L4350"></a><tt class="py-lineno">4350</tt>  <tt class="py-line">    <tt class="py-comment"># http://mail.scipy.org/pipermail/scipy-user/2009-November/023375.html</tt> </tt>
<a name="L4351"></a><tt class="py-lineno">4351</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-comment"># http://thread.gmane.org/gmane.comp.python.scientific.user/22929</tt> </tt>
<a name="L4352"></a><tt class="py-lineno">4352</tt>  <tt class="py-line"><tt class="py-comment"></tt>    <tt class="py-name">d</tt> <tt class="py-op">=</tt> <tt class="py-name">a1</tt><tt class="py-op">-</tt><tt class="py-name">a0</tt> </tt>
<a name="L4353"></a><tt class="py-lineno">4353</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">useDegree</tt><tt class="py-op">:</tt> </tt>
<a name="L4354"></a><tt class="py-lineno">4354</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1320" class="py-name"><a title="Priithon.mandel.fmod
Priithon.plt.fmod
Priithon.plt.interface.fmod
Priithon.plt.plot_objects.fmod
Priithon.plt.plot_utility.fmod
Priithon.plt.wxplt.fmod" class="py-name" href="#" onclick="return doclink('link-1320', 'fmod', 'link-1313');">fmod</a></tt><tt class="py-op">(</tt><tt class="py-name">d</tt> <tt class="py-op">+</tt> <tt class="py-number">540</tt><tt class="py-op">,</tt> <tt class="py-number">360</tt><tt class="py-op">)</tt> <tt class="py-op">-</tt> <tt class="py-number">180</tt> </tt>
<a name="L4355"></a><tt class="py-lineno">4355</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4356"></a><tt class="py-lineno">4356</tt>  <tt class="py-line">        <tt class="py-name">r</tt><tt class="py-op">=</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1321" class="py-name"><a title="Priithon.mandel.fmod
Priithon.plt.fmod
Priithon.plt.interface.fmod
Priithon.plt.plot_objects.fmod
Priithon.plt.plot_utility.fmod
Priithon.plt.wxplt.fmod" class="py-name" href="#" onclick="return doclink('link-1321', 'fmod', 'link-1313');">fmod</a></tt><tt class="py-op">(</tt><tt class="py-name">d</tt> <tt class="py-op">+</tt> <tt class="py-number">3</tt><tt class="py-op">*</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1322" class="py-name"><a title="Priithon.mandel.pi
Priithon.plt.interface.pi
Priithon.plt.pi
Priithon.plt.plot_objects.pi
Priithon.plt.plot_utility.pi
Priithon.plt.wxplt.pi" class="py-name" href="#" onclick="return doclink('link-1322', 'pi', 'link-230');">pi</a></tt><tt class="py-op">,</tt> <tt class="py-number">2</tt><tt class="py-op">*</tt><tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1323" class="py-name"><a title="Priithon.mandel.pi
Priithon.plt.interface.pi
Priithon.plt.pi
Priithon.plt.plot_objects.pi
Priithon.plt.plot_utility.pi
Priithon.plt.wxplt.pi" class="py-name" href="#" onclick="return doclink('link-1323', 'pi', 'link-230');">pi</a></tt><tt class="py-op">)</tt> <tt class="py-op">-</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt id="link-1324" class="py-name"><a title="Priithon.mandel.pi
Priithon.plt.interface.pi
Priithon.plt.pi
Priithon.plt.plot_objects.pi
Priithon.plt.plot_utility.pi
Priithon.plt.wxplt.pi" class="py-name" href="#" onclick="return doclink('link-1324', 'pi', 'link-230');">pi</a></tt> </tt>
<a name="L4357"></a><tt class="py-lineno">4357</tt>  <tt class="py-line">    <tt class="py-keyword">if</tt> <tt class="py-name">abs</tt><tt class="py-op">:</tt> </tt>
<a name="L4358"></a><tt class="py-lineno">4358</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">N</tt><tt class="py-op">.</tt><tt class="py-name">abs</tt><tt class="py-op">(</tt><tt class="py-name">r</tt><tt class="py-op">)</tt> </tt>
<a name="L4359"></a><tt class="py-lineno">4359</tt>  <tt class="py-line">    <tt class="py-keyword">else</tt><tt class="py-op">:</tt> </tt>
<a name="L4360"></a><tt class="py-lineno">4360</tt>  <tt class="py-line">        <tt class="py-keyword">return</tt> <tt class="py-name">r</tt> </tt>
</div><a name="L4361"></a><tt class="py-lineno">4361</tt>  <tt class="py-line"> </tt><script type="text/javascript">
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